| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g02505 | 6:23,805,208-23,808,332 | + | C2H6g14833 | CX6g045983 | LOC_Os06g45410 | Os06g0664800 | - | Detail |
| C1H6g05921 | 6:23,811,496-23,812,391 | + | C2H6g14833 | CX6g045983 | LOC_Os06g45420 | Os06g0664900 | - | Detail |
| C1H6g15108 | 6:23,814,443-23,817,974 | + | C2H6g00067 | CX6g041356 | LOC_Os06g45430 | Os06g0665000 | - | Detail |
| C1H6g06152 | 6:23,818,216-23,820,012 | - | C2H6g17880 | CX6g041675 | LOC_Os06g45440 | Os06g0665100 | - | Detail |
| C1H6g22830 | 6:23,821,406-23,822,652 | - | C2H6g03277 | CX6g045958 | LOC_Os06g45450 | Os06g0665200 | - | Detail |
| C1H6g16253 | 6:23,828,480-23,830,730 | - | C2H6g02226 | CX6g045292 | LOC_Os06g45460 | Os06g0665400 | APO1, apo1(t), apo1, SCM2, SCM2/APO1, OsFbox321, Os_F0393 | Detail |
| C1H6g09339 | 6:23,841,125-23,845,351 | - | C2H6g26324 | CX6g042079 | LOC_Os06g45480 | Os06g0665500 | OsAAH | Detail |
| C1H6g29065 | 6:23,857,926-23,863,939 | - | C2H6g03492 | CX6g045639 | LOC_Os06g45500 | Os06g0665800 | HMA9, OsHMA9 ,oshma9-1, oshma9-2, HMA9 | Detail |
| C1H6g18112 | 6:23,869,494-23,871,887 | + | C2H6g11562 | CX6g045580 | LOC_Os06g45510 | Os06g0665900 | - | Detail |
| C1H6g21015 | 6:23,886,082-23,889,910 | + | C2H6g00145 | CX6g042910 | LOC_Os06g45540 | Os06g0666100 | SG6, GL6 | Detail |
| C1H6g24164 | 6:23,914,434-23,915,075 | + | - | CX6g042900 | LOC_Os06g45570 | Os06g0666400 | OsVQ25 | Detail |
| C1H6g09228 | 6:23,918,570-23,919,115 | + | C2H6g24158 | CX6g041424 | LOC_Os06g45580 | Os06g0666500 | - | Detail |
| C1H6g25662 | 6:23,921,637-23,925,360 | - | C2H6g07620 | CX6g043004 | LOC_Os06g45590 | Os06g0666600 | - | Detail |
| C1H6g20256 | 6:23,929,108-23,929,899 | + | - | CX6g045463 | LOC_Os06g45600 | - | - | Detail |
| C1H6g24049 | 6:23,940,235-23,940,543 | + | - | CX6g043314 | LOC_Os06g45610 | Os06g0666800 | - | Detail |
| C1H6g24780 | 6:23,942,548-23,943,519 | - | - | - | - | - | - | Detail |
| C1H6g10238 | 6:23,943,737-23,945,871 | - | C2H6g17606 | CX6g042443 | LOC_Os06g45620 | - | - | Detail |
| C1H6g29045 | 6:23,959,445-23,962,624 | + | C2H6g09505 | CX6g042136 | LOC_Os06g45630 | Os06g0667000 | - | Detail |
| C1H6g16433 | 6:23,968,678-23,969,430 | + | C2H2g02842 | CX6g043046 | LOC_Os06g45640 | Os06g0667100 | OsNF-YC4, HAP5B | Detail |
| C1H6g30018 | 6:23,974,989-23,975,201 | + | C2H6g26041 | CX6g045638 | LOC_Os06g45650 | Os06g0667200 | MADS30, OsMADS30 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000822 | 1:34,948,280-34,955,063 | + | C1H1g18538 | C2H1g19705 | LOC_Os01g67970 | Os01g0907400 | JMJ705 | Detail |
| CX1g000036 | 1:34,956,531-34,957,646 | + | C1H1g19874 | C2H1g29254 | LOC_Os01g67980 | Os01g0907600 | OsSAG12-1 | Detail |
| CX1g003353 | 1:34,970,250-34,970,465 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g000912 | 1:34,973,015-34,976,581 | + | C1H1g08768 | C2H1g19503 | LOC_Os01g68000 | Os01g0907900 | PLA2, pla2, pla2(pla2-1, pla2-2), plt2, LHD2 | Detail |
| CX1g000788 | 1:34,987,318-34,990,053 | - | C1H1g13810 | C2H1g14371 | LOC_Os01g68010 | Os01g0908100 | - | Detail |
| CX1g002877 | 1:34,993,563-34,997,264 | + | C1H1g00934 | C2H1g27794 | LOC_Os01g68020 | Os01g0908200 | OsBT | Detail |
| CX1g005492 | 1:34,998,650-34,999,922 | - | C1H1g26380 | C2H1g06918 | LOC_Os01g68030 | Os01g0908400 | - | Detail |
| CX1g002681 | 1:35,001,221-35,004,454 | - | C1H1g26157 | C2H1g30537 | LOC_Os01g68040 | Os01g0908500 | - | Detail |
| CX1g003019 | 1:35,011,548-35,013,895 | + | C1H1g02663 | C2H1g27819 | LOC_Os01g68050 | Os01g0908600 | OsProT1 | Detail |
| CX1g003471 | 1:35,014,768-35,018,309 | - | C1H1g28238 | C2H1g20684 | LOC_Os01g68060 | Os01g0908700 | - | Detail |
| CX1g001370 | 1:35,026,139-35,027,659 | + | C1H1g12819 | C2H1g22636 | LOC_Os01g68070 | Os01g0908800 | - | Detail |
| CX1g007120 | 1:35,031,210-35,032,580 | - | C1H1g18966 | - | LOC_Os01g68090 | Os01g0909000 | - | Detail |
| CX1g001897 | 1:35,033,860-35,036,731 | + | C1H1g09218 | C2H1g29519 | LOC_Os01g68104 | Os01g0909100 | - | Detail |
| CX1g000171 | 1:35,039,632-35,039,793 | - | - | C2H1g05938 | - | Os01g0909150 | - | Detail |
| CX1g001307 | 1:35,041,815-35,051,455 | - | C1H1g21604 | C2H1g23470 | LOC_Os01g68120 | Os01g0909200 | OsDCL3a | Detail |
| CX1g003340 | 1:35,052,600-35,052,986 | - | - | - | - | - | - | Detail |
| CX1g000844 | 1:35,055,581-35,059,205 | + | C1H1g09277 | C2H1g03983 | LOC_Os01g68130 | Os01g0909300 | - | Detail |
| CX1g002611 | 1:35,060,767-35,061,732 | - | C1H1g09913 | - | LOC_Os01g68140 | Os01g0909400 | - | Detail |
| CX1g003036 | 1:35,068,085-35,071,545 | + | C1H1g04879 | C2H1g20920 | LOC_Os01g68260 | Os01g0971200 | - | Detail |
| CX1g005194 | 1:35,072,157-35,073,446 | - | C1H1g17800 | C2H1g26270 | - | Os01g0910500 | - | Detail |