| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g10957 | 4:15,270,002-15,274,850 | - | C1H4g23526 | CX4g035973 | LOC_Os04g30430 | Os04g0372800 | - | Detail |
| C2H4g23915 | 4:15,280,849-15,281,550 | + | C1H4g19886 | - | - | - | - | Detail |
| C2H4g15991 | 4:15,282,642-15,285,663 | + | C1H4g17345 | CX4g031881 | LOC_Os04g30450 | Os04g0373000 | - | Detail |
| C2H4g25729 | 4:15,290,286-15,290,513 | + | C1H4g15354 | CX4g034490 | LOC_Os04g30460 | - | - | Detail |
| C2H4g18361 | 4:15,302,768-15,303,096 | + | C1H4g23534 | CX4g034565 | LOC_Os04g30490 | Os04g0373400 | - | Detail |
| C2H4g27653 | 4:15,303,881-15,306,581 | + | C1H4g23534 | CX4g034565 | LOC_Os04g30490 | Os04g0373400 | - | Detail |
| C2H4g16321 | 4:15,350,952-15,356,452 | + | C1H4g09226 | CX4g032818 | LOC_Os04g30610 | Os04g0375300 | - | Detail |
| C2H4g25498 | 4:15,374,314-15,378,838 | + | C1H4g09226 | CX4g032818 | LOC_Os04g30660 | Os04g0375300 | - | Detail |
| C2H4g15638 | 4:15,392,590-15,397,148 | - | C1H4g09945 | CX4g032755 | LOC_Os04g30720 | Os04g0375900 | - | Detail |
| C2H4g24509 | 4:15,402,517-15,403,963 | - | C1H4g09093 | CX4g035820 | LOC_Os02g30050 | Os04g0376000 | - | Detail |
| C2H4g23366 | 4:15,404,901-15,408,517 | - | C1H4g14613 | CX4g036314 | LOC_Os04g30740 | Os04g0376100 | - | Detail |
| C2H4g02514 | 4:15,410,891-15,411,646 | + | C1H4g11665 | CX4g033855 | LOC_Os04g30750 | - | - | Detail |
| C2H4g13161 | 4:15,411,838-15,413,283 | + | C1H4g12135 | CX4g033855 | LOC_Os04g30750 | Os04g0376200 | - | Detail |
| C2H4g28902 | 4:15,416,552-15,421,210 | - | C1H4g11616 | CX4g034926 | LOC_Os04g30760 | Os04g0376300 | OsPLS4 | Detail |
| C2H4g22640 | 4:15,426,774-15,428,288 | - | C1H4g04380 | CX4g034222 | LOC_Os04g30770 | Os04g0376400 | - | Detail |
| C2H4g16376 | 4:15,433,976-15,438,516 | - | C1H4g04365 | CX4g036230 | LOC_Os04g30780 | Os04g0376500 | - | Detail |
| C2H4g13123 | 4:15,440,432-15,442,902 | - | C1H4g01599 | CX4g033110 | LOC_Os04g30790 | Os04g0376600 | - | Detail |
| C2H4g22799 | 4:15,447,246-15,450,378 | - | C1H4g10257 | CX11g013645 | LOC_Os04g30800 | Os04g0376700 | - | Detail |
| C2H4g24581 | 4:15,467,640-15,471,482 | + | C1H4g19859 | CX4g034805 | LOC_Os04g30880 | Os04g0377600 | - | Detail |
| C2H4g01775 | 4:15,472,365-15,476,696 | - | C1H4g31829 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001116 | 1:34,784,674-34,784,997 | + | - | - | - | Os01g0902000 | - | Detail |
| CX1g002834 | 1:34,790,442-34,797,235 | + | C1H1g07945 | C2H1g01159 | LOC_Os01g67590 | Os01g0902200 | - | Detail |
| CX1g004278 | 1:34,798,226-34,800,462 | - | C1H1g09859 | C2H1g09953 | LOC_Os01g67600 | Os01g0902300 | - | Detail |
| CX1g003173 | 1:34,806,131-34,808,833 | + | C1H1g10919 | C2H1g21673 | LOC_Os01g67630 | Os01g0902700 | - | Detail |
| CX1g000416 | 1:34,812,000-34,815,195 | + | C1H1g02991 | C2H1g11697 | LOC_Os01g67640 | Os01g0902800 | - | Detail |
| CX1g005371 | 1:34,818,876-34,819,637 | + | C1H1g01517 | C2H1g22514 | LOC_Os01g67650 | Os01g0842200 | - | Detail |
| CX1g006854 | 1:34,836,351-34,841,304 | - | C1H1g12112 | C2H1g29533 | LOC_Os01g67720 | Os01g0904200 | - | Detail |
| CX1g003334 | 1:34,841,759-34,843,750 | + | C1H1g23804 | C2H1g19214 | LOC_Os01g67730 | Os01g0904300 | - | Detail |
| CX1g000154 | 1:34,847,811-34,855,698 | - | C1H1g23062 | C2H1g10276 | LOC_Os01g67740 | Os01g0904400 | - | Detail |
| CX1g001313 | 1:34,856,926-34,861,148 | - | C1H1g02720 | C2H1g16992 | LOC_Os01g67750 | Os01g0904500 | - | Detail |
| CX1g004760 | 1:34,864,000-34,867,538 | - | C1H1g03400 | C2H1g05837 | LOC_Os01g67770 | Os01g0904700 | RR26, OsRR26, Rrb6, Orr6, OsRR16, OsRRB6 | Detail |
| CX1g000275 | 1:34,880,111-34,881,901 | + | C1H1g01129 | C2H1g29165 | LOC_Os01g67810 | Os01g0905200 | - | Detail |
| CX1g001652 | 1:34,883,598-34,885,652 | + | C1H1g31042 | C2H1g16521 | LOC_Os01g67820 | Os01g0905300 | - | Detail |
| CX1g000161 | 1:34,887,498-34,890,781 | - | C1H1g11384 | C2H1g29056 | LOC_Os01g67830 | Os01g0905400 | - | Detail |
| CX1g004783 | 1:34,898,171-34,901,532 | + | C1H1g03018 | C2H1g13823 | LOC_Os01g67850 | Os01g0905700 | - | Detail |
| CX1g001709 | 1:34,903,379-34,913,262 | - | C1H1g11811 | C2H1g10330 | LOC_Os01g67860 | Os01g0905800 | - | Detail |
| CX1g002463 | 1:34,917,734-34,926,141 | - | C1H1g19357 | C2H1g09299 | LOC_Os01g67880 | Os01g0906200 | - | Detail |
| CX1g003860 | 1:34,930,251-34,935,671 | - | C1H1g19297 | C2H1g18200 | LOC_Os01g67920 | Os01g0906600 | - | Detail |
| CX1g003493 | 1:34,938,932-34,939,720 | + | C1H1g12726 | C2H1g20697 | LOC_Os01g67950 | Os01g0907200 | - | Detail |
| CX1g004144 | 1:34,942,662-34,947,277 | + | C1H1g26541 | C2H1g10610 | LOC_Os01g67960 | Os01g0907300 | - | Detail |