| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g01681 | 9:13,681,021-13,684,172 | + | C1H9g16732 | CX9g055317 | LOC_Os09g26920 | Os09g0441000 | - | Detail |
| C2H9g14256 | 9:13,686,635-13,688,330 | - | C1H9g00795 | CX9g056608 | LOC_Os09g26940 | Os09g0441100 | - | Detail |
| C2H9g29608 | 9:13,695,289-13,696,109 | - | - | - | - | - | - | Detail |
| C2H9g11039 | 9:13,698,956-13,699,243 | + | C1H9g13952 | - | - | - | - | Detail |
| C2H9g06261 | 9:13,712,511-13,715,100 | + | C1H9g04789 | CX9g055711 | LOC_Os09g26960 | Os09g0441400 | - | Detail |
| C2H9g20934 | 9:13,717,585-13,720,216 | + | C1H9g04387 | CX9g057450 | LOC_Os09g26970 | Os09g0441600 | qGL9.1 | Detail |
| C2H9g16046 | 9:13,723,202-13,728,472 | - | C1H9g03625 | CX9g055711 | LOC_Os09g26980 | Os09g0441700 | - | Detail |
| C2H9g26101 | 9:13,737,002-13,742,890 | + | C1H9g22464 | CX9g057036 | LOC_Os09g26999 | Os09g0441900 | - | Detail |
| C2H9g18709 | 9:13,771,124-13,773,920 | - | C1H9g22007 | CX9g056107 | LOC_Os09g27010 | Os09g0442100 | - | Detail |
| C2H9g10492 | 9:13,787,469-13,792,222 | + | C1H9g14149 | CX9g055060 | LOC_Os09g27030 | Os09g0442300 | - | Detail |
| C2H9g27420 | 9:13,794,348-13,796,769 | + | C1H9g06228 | CX9g054851 | LOC_Os09g27040 | Os09g0442400 | OsGEX1 | Detail |
| C2H9g03487 | 9:13,802,362-13,805,866 | + | C1H9g28611 | CX9g058113 | LOC_Os09g27050 | Os09g0442600 | OsRSH3 | Detail |
| C2H9g20875 | 9:13,809,213-13,809,820 | - | C1H9g25409 | CX9g057038 | LOC_Os09g27060 | Os09g0442700 | OsDDM1a | Detail |
| C2H9g29144 | 9:13,820,560-13,825,025 | - | C1H9g17795 | CX9g057038 | LOC_Os09g27060 | Os09g0442700 | OsDDM1a | Detail |
| C2H9g18109 | 9:13,828,304-13,828,585 | + | C1H9g01438 | CX9g057769 | LOC_Os09g27070 | Os09g0442800 | - | Detail |
| C2H9g05302 | 9:13,834,070-13,838,764 | + | C1H9g25976 | CX9g056575 | LOC_Os09g27080 | Os09g0442900 | - | Detail |
| C2H9g09021 | 9:13,842,853-13,843,461 | + | C1H9g19048 | CX9g055406 | LOC_Os09g27100 | Os09g0443000 | - | Detail |
| C2H9g16776 | 9:13,853,540-13,856,823 | - | C1H9g16243 | CX9g054949 | LOC_Os09g27140 | Os09g0443500 | - | Detail |
| C2H9g27037 | 9:13,860,031-13,861,885 | - | C1H9g02557 | CX9g055154 | LOC_Os09g27150 | Os09g0544300 | - | Detail |
| C2H9g09304 | 9:13,863,378-13,864,400 | + | C1H9g23735 | CX9g056527 | LOC_Os09g27160 | Os09g0443800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001116 | 1:34,784,674-34,784,997 | + | - | - | - | Os01g0902000 | - | Detail |
| CX1g002834 | 1:34,790,442-34,797,235 | + | C1H1g07945 | C2H1g01159 | LOC_Os01g67590 | Os01g0902200 | - | Detail |
| CX1g004278 | 1:34,798,226-34,800,462 | - | C1H1g09859 | C2H1g09953 | LOC_Os01g67600 | Os01g0902300 | - | Detail |
| CX1g003173 | 1:34,806,131-34,808,833 | + | C1H1g10919 | C2H1g21673 | LOC_Os01g67630 | Os01g0902700 | - | Detail |
| CX1g000416 | 1:34,812,000-34,815,195 | + | C1H1g02991 | C2H1g11697 | LOC_Os01g67640 | Os01g0902800 | - | Detail |
| CX1g005371 | 1:34,818,876-34,819,637 | + | C1H1g01517 | C2H1g22514 | LOC_Os01g67650 | Os01g0842200 | - | Detail |
| CX1g006854 | 1:34,836,351-34,841,304 | - | C1H1g12112 | C2H1g29533 | LOC_Os01g67720 | Os01g0904200 | - | Detail |
| CX1g003334 | 1:34,841,759-34,843,750 | + | C1H1g23804 | C2H1g19214 | LOC_Os01g67730 | Os01g0904300 | - | Detail |
| CX1g000154 | 1:34,847,811-34,855,698 | - | C1H1g23062 | C2H1g10276 | LOC_Os01g67740 | Os01g0904400 | - | Detail |
| CX1g001313 | 1:34,856,926-34,861,148 | - | C1H1g02720 | C2H1g16992 | LOC_Os01g67750 | Os01g0904500 | - | Detail |
| CX1g004760 | 1:34,864,000-34,867,538 | - | C1H1g03400 | C2H1g05837 | LOC_Os01g67770 | Os01g0904700 | RR26, OsRR26, Rrb6, Orr6, OsRR16, OsRRB6 | Detail |
| CX1g000275 | 1:34,880,111-34,881,901 | + | C1H1g01129 | C2H1g29165 | LOC_Os01g67810 | Os01g0905200 | - | Detail |
| CX1g001652 | 1:34,883,598-34,885,652 | + | C1H1g31042 | C2H1g16521 | LOC_Os01g67820 | Os01g0905300 | - | Detail |
| CX1g000161 | 1:34,887,498-34,890,781 | - | C1H1g11384 | C2H1g29056 | LOC_Os01g67830 | Os01g0905400 | - | Detail |
| CX1g004783 | 1:34,898,171-34,901,532 | + | C1H1g03018 | C2H1g13823 | LOC_Os01g67850 | Os01g0905700 | - | Detail |
| CX1g001709 | 1:34,903,379-34,913,262 | - | C1H1g11811 | C2H1g10330 | LOC_Os01g67860 | Os01g0905800 | - | Detail |
| CX1g002463 | 1:34,917,734-34,926,141 | - | C1H1g19357 | C2H1g09299 | LOC_Os01g67880 | Os01g0906200 | - | Detail |
| CX1g003860 | 1:34,930,251-34,935,671 | - | C1H1g19297 | C2H1g18200 | LOC_Os01g67920 | Os01g0906600 | - | Detail |
| CX1g003493 | 1:34,938,932-34,939,720 | + | C1H1g12726 | C2H1g20697 | LOC_Os01g67950 | Os01g0907200 | - | Detail |
| CX1g004144 | 1:34,942,662-34,947,277 | + | C1H1g26541 | C2H1g10610 | LOC_Os01g67960 | Os01g0907300 | - | Detail |