| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g05770 | 3:12,121,330-12,124,833 | + | C2H3g06071 | CX3g031073 | LOC_Os03g23960 | Os03g0355700 | - | Detail |
| C1H3g06132 | 3:12,125,485-12,127,722 | - | C2H3g19901 | CX3g030920 | LOC_Os03g23970 | Os03g0355800 | - | Detail |
| C1H3g21571 | 3:12,129,195-12,132,058 | - | C2H3g13826 | CX3g031321 | LOC_Os03g23980 | Os03g0355900 | - | Detail |
| C1H3g12783 | 3:12,137,479-12,139,967 | - | C2H3g28171 | CX3g028805 | LOC_Os03g24020 | Os03g0356300 | - | Detail |
| C1H3g04093 | 3:12,143,997-12,147,716 | - | C2H3g03916 | CX3g029486 | LOC_Os03g24040 | Os03g0356414 | OsDIS1, RIP5 | Detail |
| C1H3g10870 | 3:12,158,192-12,161,185 | - | C2H3g11837 | CX3g028879 | LOC_Os03g24060 | Os03g0356484 | - | Detail |
| C1H3g31470 | 3:12,170,300-12,173,233 | + | C2H3g26682 | CX3g029746 | LOC_Os03g24070 | Os03g0356498 | - | Detail |
| C1H3g17743 | 3:12,199,252-12,203,723 | + | C2H3g08808 | CX3g025443 | LOC_Os03g24160 | Os03g0356582 | - | Detail |
| C1H3g08944 | 3:12,203,997-12,209,435 | + | C2H3g17773 | CX3g026195 | LOC_Os03g24170 | Os03g0356596 | - | Detail |
| C1H3g10425 | 3:12,211,416-12,223,031 | - | C2H3g23180 | CX3g030641 | LOC_Os03g24180 | Os03g0356638 | - | Detail |
| C1H3g18732 | 3:12,228,197-12,232,366 | - | C2H3g21028 | - | LOC_Os03g24184 | Os03g0356652 | - | Detail |
| C1H3g13461 | 3:12,238,493-12,247,765 | - | C2H3g17361 | CX3g027125 | - | - | - | Detail |
| C1H3g23838 | 3:12,260,339-12,272,066 | + | C2H3g17190 | CX3g026980 | LOC_Os03g24220 | Os03g0356700 | - | Detail |
| C1H3g26654 | 3:12,300,781-12,317,324 | - | C2H3g04618 | CX3g025978 | LOC_Os03g24339 | Os03g0358000 | - | Detail |
| C1H3g20604 | 3:12,323,583-12,326,716 | + | C2H3g25339 | CX3g027667 | LOC_Os03g24380 | Os03g0358100 | OsPHGPX | Detail |
| C1H3g15120 | 3:12,328,181-12,330,447 | - | C2H3g18105 | CX3g026378 | LOC_Os03g24390 | Os03g0358200 | - | Detail |
| C1H3g25429 | 3:12,330,989-12,331,724 | - | C2H3g18105 | CX3g026378 | LOC_Os03g24390 | Os03g0358200 | - | Detail |
| C1H3g03806 | 3:12,337,343-12,338,848 | + | C2H3g29820 | CX3g027747 | LOC_Os03g24430 | Os03g0358800 | - | Detail |
| C1H3g03929 | 3:12,340,514-12,340,877 | + | C2H3g02173 | - | - | - | - | Detail |
| C1H3g20488 | 3:12,347,514-12,355,111 | - | C2H3g26481 | CX3g029410 | LOC_Os03g24450 | Os03g0359000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001116 | 1:34,784,674-34,784,997 | + | - | - | - | Os01g0902000 | - | Detail |
| CX1g002834 | 1:34,790,442-34,797,235 | + | C1H1g07945 | C2H1g01159 | LOC_Os01g67590 | Os01g0902200 | - | Detail |
| CX1g004278 | 1:34,798,226-34,800,462 | - | C1H1g09859 | C2H1g09953 | LOC_Os01g67600 | Os01g0902300 | - | Detail |
| CX1g003173 | 1:34,806,131-34,808,833 | + | C1H1g10919 | C2H1g21673 | LOC_Os01g67630 | Os01g0902700 | - | Detail |
| CX1g000416 | 1:34,812,000-34,815,195 | + | C1H1g02991 | C2H1g11697 | LOC_Os01g67640 | Os01g0902800 | - | Detail |
| CX1g005371 | 1:34,818,876-34,819,637 | + | C1H1g01517 | C2H1g22514 | LOC_Os01g67650 | Os01g0842200 | - | Detail |
| CX1g006854 | 1:34,836,351-34,841,304 | - | C1H1g12112 | C2H1g29533 | LOC_Os01g67720 | Os01g0904200 | - | Detail |
| CX1g003334 | 1:34,841,759-34,843,750 | + | C1H1g23804 | C2H1g19214 | LOC_Os01g67730 | Os01g0904300 | - | Detail |
| CX1g000154 | 1:34,847,811-34,855,698 | - | C1H1g23062 | C2H1g10276 | LOC_Os01g67740 | Os01g0904400 | - | Detail |
| CX1g001313 | 1:34,856,926-34,861,148 | - | C1H1g02720 | C2H1g16992 | LOC_Os01g67750 | Os01g0904500 | - | Detail |
| CX1g004760 | 1:34,864,000-34,867,538 | - | C1H1g03400 | C2H1g05837 | LOC_Os01g67770 | Os01g0904700 | RR26, OsRR26, Rrb6, Orr6, OsRR16, OsRRB6 | Detail |
| CX1g000275 | 1:34,880,111-34,881,901 | + | C1H1g01129 | C2H1g29165 | LOC_Os01g67810 | Os01g0905200 | - | Detail |
| CX1g001652 | 1:34,883,598-34,885,652 | + | C1H1g31042 | C2H1g16521 | LOC_Os01g67820 | Os01g0905300 | - | Detail |
| CX1g000161 | 1:34,887,498-34,890,781 | - | C1H1g11384 | C2H1g29056 | LOC_Os01g67830 | Os01g0905400 | - | Detail |
| CX1g004783 | 1:34,898,171-34,901,532 | + | C1H1g03018 | C2H1g13823 | LOC_Os01g67850 | Os01g0905700 | - | Detail |
| CX1g001709 | 1:34,903,379-34,913,262 | - | C1H1g11811 | C2H1g10330 | LOC_Os01g67860 | Os01g0905800 | - | Detail |
| CX1g002463 | 1:34,917,734-34,926,141 | - | C1H1g19357 | C2H1g09299 | LOC_Os01g67880 | Os01g0906200 | - | Detail |
| CX1g003860 | 1:34,930,251-34,935,671 | - | C1H1g19297 | C2H1g18200 | LOC_Os01g67920 | Os01g0906600 | - | Detail |
| CX1g003493 | 1:34,938,932-34,939,720 | + | C1H1g12726 | C2H1g20697 | LOC_Os01g67950 | Os01g0907200 | - | Detail |
| CX1g004144 | 1:34,942,662-34,947,277 | + | C1H1g26541 | C2H1g10610 | LOC_Os01g67960 | Os01g0907300 | - | Detail |