| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g27265 | 3:8,406,296-8,413,114 | + | C1H3g22706 | CX3g028994 | LOC_Os03g17210 | Os03g0280700 | - | Detail |
| C2H3g20835 | 3:8,414,698-8,415,657 | + | C1H3g01230 | CX3g029125 | LOC_Os03g17220 | Os03g0280750 | - | Detail |
| C2H3g25701 | 3:8,416,159-8,419,177 | - | C1H3g29688 | CX3g025025 | LOC_Os03g17230 | Os03g0280800 | OsUXS1 | Detail |
| C2H3g19709 | 3:8,420,304-8,423,679 | + | C1H3g02805 | CX3g031048 | LOC_Os03g17240 | Os03g0281000 | - | Detail |
| C2H3g01163 | 3:8,426,934-8,429,275 | + | C1H3g19384 | CX3g028226 | LOC_Os03g17250 | Os03g0281100 | - | Detail |
| C2H3g30239 | 3:8,433,479-8,434,423 | - | C1H3g05247 | CX3g026165 | LOC_Os03g17260 | Os03g0281201 | - | Detail |
| C2H3g10844 | 3:8,435,961-8,444,241 | - | C1H3g09869 | CX3g025004 | LOC_Os03g17270 | Os03g0281300 | - | Detail |
| C2H3g22572 | 3:8,445,096-8,447,903 | - | C1H3g20489 | CX3g030681 | LOC_Os03g14100 | Os03g0378500 | Os2R_MYB37 | Detail |
| C2H3g23238 | 3:8,455,311-8,457,977 | + | C1H3g05953 | CX3g030928 | LOC_Os03g17300 | Os03g0281500 | OsCrRLK1L7 | Detail |
| C2H3g13223 | 3:8,458,066-8,464,430 | - | C1H3g23808 | CX3g030523 | LOC_Os03g17310 | Os03g0281600 | OsECA1 | Detail |
| C2H3g28841 | 3:8,469,216-8,473,827 | - | C1H3g08368 | CX3g026907 | LOC_Os03g17340 | Os03g0281800 | - | Detail |
| C2H3g02883 | 3:8,476,487-8,478,850 | + | C1H3g04312 | CX3g027101 | LOC_Os03g17350 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| C2H3g04384 | 3:8,484,137-8,486,437 | + | C1H3g07058 | CX3g025177 | LOC_Os03g17370 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| C2H3g12323 | 3:8,495,135-8,500,989 | - | - | - | - | - | - | Detail |
| C2H3g12675 | 3:8,515,622-8,516,839 | + | C1H3g15208 | CX3g027572 | LOC_Os03g17432 | Os03g0282700 | - | Detail |
| C2H3g17220 | 3:8,517,221-8,519,724 | - | C1H3g13015 | CX3g026586 | LOC_Os03g17440 | Os03g0282800 | - | Detail |
| C2H3g11550 | 3:8,520,256-8,523,120 | + | C1H3g25350 | CX3g027144 | LOC_Os03g17450 | Os03g0282900 | - | Detail |
| C2H3g03924 | 3:8,524,219-8,525,364 | - | C1H3g12499 | - | LOC_Os03g17460 | Os03g0283000 | - | Detail |
| C2H3g06812 | 3:8,526,764-8,529,124 | - | C1H3g12499 | CX3g029922 | LOC_Os03g17470 | Os03g0283100 | - | Detail |
| C2H3g13775 | 3:8,532,126-8,534,265 | - | C1H3g26286 | CX3g029922 | LOC_Os03g17480 | Os03g0283200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001366 | 1:34,610,771-34,612,933 | + | C1H1g20281 | C2H1g30021 | LOC_Os01g67320 | Os01g0898800 | - | Detail |
| CX1g002818 | 1:34,616,179-34,621,149 | + | C1H1g13611 | C2H1g25365 | LOC_Os01g67330 | Os01g0898900 | - | Detail |
| CX1g005754 | 1:34,623,228-34,625,380 | - | C1H1g22738 | C2H1g14239 | LOC_Os01g67340 | Os01g0899000 | - | Detail |
| CX1g000738 | 1:34,633,572-34,633,787 | + | C1H1g24100 | C2H1g03375 | LOC_Os01g67350 | Os01g0899100 | - | Detail |
| CX1g003678 | 1:34,635,164-34,638,166 | - | C1H1g16761 | C2H1g12354 | LOC_Os01g67360 | Os01g0899200 | - | Detail |
| CX1g003648 | 1:34,643,448-34,647,980 | - | C1H1g13163 | C2H1g12009 | LOC_Os01g67370 | Os01g0899500 | - | Detail |
| CX1g003014 | 1:34,650,882-34,652,577 | - | C1H1g18275 | C2H1g06986 | LOC_Os01g67390 | Os01g0899700 | COG2 | Detail |
| CX1g005480 | 1:34,654,801-34,658,417 | - | C1H1g21259 | C2H1g13678 | LOC_Os01g67410 | Os01g0899800 | - | Detail |
| CX1g001856 | 1:34,668,641-34,674,930 | + | C1H1g15270 | C2H1g15739 | LOC_Os01g67420 | Os01g0900200 | - | Detail |
| CX1g005565 | 1:34,687,349-34,688,707 | + | C1H1g31442 | C2H1g20530 | LOC_Os01g67430 | Os01g0900400 | EG1, eg1 | Detail |
| CX1g005830 | 1:34,699,359-34,700,696 | + | C1H1g09474 | C2H1g20530 | LOC_Os01g67450 | Os01g0900700 | - | Detail |
| CX1g005857 | 1:34,715,761-34,720,403 | + | C1H1g14363 | C2H1g07733 | LOC_Os01g67480 | Os01g0900800 | - | Detail |
| CX1g000615 | 1:34,721,058-34,721,589 | - | C1H1g14549 | C2H1g29765 | LOC_Os01g67490 | Os01g0900900 | - | Detail |
| CX1g005989 | 1:34,726,002-34,728,903 | - | C1H1g27174 | C2H1g26804 | LOC_Os01g67500 | Os01g0901000 | - | Detail |
| CX1g004183 | 1:34,741,738-34,747,018 | - | C1H1g12588 | C2H1g11554 | LOC_Os01g67510 | Os01g0901200 | - | Detail |
| CX1g001539 | 1:34,756,049-34,759,482 | + | C1H1g13500 | C2H1g28157 | LOC_Os01g67530 | Os01g0901500 | - | Detail |
| CX1g003814 | 1:34,765,343-34,768,905 | + | C1H1g11167 | C2H1g14160 | LOC_Os01g67550 | Os01g0901700 | - | Detail |
| CX1g002950 | 1:34,769,605-34,771,813 | - | C1H1g11537 | C2H1g10209 | LOC_Os01g67560 | Os01g0901800 | - | Detail |
| CX1g002071 | 1:34,773,392-34,777,370 | - | C1H1g11165 | C2H1g18397 | LOC_Os01g67570 | Os01g0901900 | OsPAP3 | Detail |
| CX1g003005 | 1:34,778,526-34,784,328 | - | C1H1g07120 | C2H1g27175 | LOC_Os01g67580 | Os01g0902100 | - | Detail |