| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g16390 | 6:3,252,109-3,268,767 | - | C1H6g28905 | CX6g042053 | LOC_Os06g08380 | Os06g0182300 | GSL5, OsGSL5 | Detail |
| C2H6g02045 | 6:3,271,911-3,276,116 | + | C1H6g20285 | CX6g041705 | LOC_Os06g08390 | - | - | Detail |
| C2H6g17246 | 6:3,277,364-3,285,254 | + | C1H6g18809 | CX6g042466 | LOC_Os06g08400 | Os06g0182500 | - | Detail |
| C2H6g25998 | 6:3,294,069-3,294,383 | - | C1H6g30036 | - | - | - | - | Detail |
| C2H6g09876 | 6:3,319,719-3,323,508 | + | C1H6g06067 | CX6g042952 | LOC_Os06g08550 | Os06g0184500 | OsNPY2 | Detail |
| C2H6g09197 | 6:3,328,441-3,332,856 | - | C1H6g08815 | CX6g043855 | LOC_Os06g08730 | Os06g0186500 | - | Detail |
| C2H6g26593 | 6:3,340,733-3,346,861 | + | C1H6g03621 | CX6g043949 | LOC_Os06g08720 | Os06g0186400 | - | Detail |
| C2H6g15979 | 6:3,350,815-3,354,306 | + | C1H6g04589 | CX6g044426 | LOC_Os06g08710 | Os06g0186300 | - | Detail |
| C2H6g28335 | 6:3,375,421-3,380,754 | + | C1H6g29216 | CX6g043481 | LOC_Os06g08440 | Os06g0183100 | ORR2, ORR2, B-type RR | Detail |
| C2H6g18941 | 6:3,380,961-3,388,251 | - | C1H6g11123 | CX6g041664 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C2H6g17086 | 6:3,393,570-3,395,054 | + | C1H6g14213 | CX6g044750 | LOC_Os06g08460 | Os06g0183600 | - | Detail |
| C2H6g26636 | 6:3,395,818-3,399,180 | - | C1H6g00515 | CX6g043120 | LOC_Os06g08470 | Os06g0183700 | - | Detail |
| C2H6g26382 | 6:3,399,457-3,416,201 | - | C1H6g09185 | CX6g043183 | LOC_Os06g08480 | Os06g0183800 | OsCHR702, CHR702 | Detail |
| C2H6g23757 | 6:3,421,711-3,422,763 | - | - | CX6g044993 | LOC_Os06g08490 | Os06g0183900 | - | Detail |
| C2H6g18991 | 6:3,425,422-3,427,727 | - | C1H6g27595 | CX6g041255 | LOC_Os06g08500 | Os06g0184000 | OsRHL1 | Detail |
| C2H6g17059 | 6:3,433,660-3,434,220 | - | C1H6g21452 | CX6g042954 | LOC_Os06g08510 | Os06g0184100 | DPL2 | Detail |
| C2H6g17339 | 6:3,438,154-3,439,624 | - | C1H6g01823 | CX6g043502 | LOC_Os06g08520 | Os06g0184200 | - | Detail |
| C2H6g05817 | 6:3,447,165-3,452,264 | - | C1H6g09856 | CX6g045722 | LOC_Os06g08530 | Os06g0184300 | - | Detail |
| C2H6g11053 | 6:3,454,823-3,460,982 | + | C1H6g07584 | CX6g042782 | LOC_Os06g08540 | Os06g0184400 | - | Detail |
| C2H6g21573 | 6:3,462,352-3,466,661 | - | C1H6g06067 | CX6g042952 | LOC_Os06g08550 | Os06g0184500 | OsNPY2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001366 | 1:34,610,771-34,612,933 | + | C1H1g20281 | C2H1g30021 | LOC_Os01g67320 | Os01g0898800 | - | Detail |
| CX1g002818 | 1:34,616,179-34,621,149 | + | C1H1g13611 | C2H1g25365 | LOC_Os01g67330 | Os01g0898900 | - | Detail |
| CX1g005754 | 1:34,623,228-34,625,380 | - | C1H1g22738 | C2H1g14239 | LOC_Os01g67340 | Os01g0899000 | - | Detail |
| CX1g000738 | 1:34,633,572-34,633,787 | + | C1H1g24100 | C2H1g03375 | LOC_Os01g67350 | Os01g0899100 | - | Detail |
| CX1g003678 | 1:34,635,164-34,638,166 | - | C1H1g16761 | C2H1g12354 | LOC_Os01g67360 | Os01g0899200 | - | Detail |
| CX1g003648 | 1:34,643,448-34,647,980 | - | C1H1g13163 | C2H1g12009 | LOC_Os01g67370 | Os01g0899500 | - | Detail |
| CX1g003014 | 1:34,650,882-34,652,577 | - | C1H1g18275 | C2H1g06986 | LOC_Os01g67390 | Os01g0899700 | COG2 | Detail |
| CX1g005480 | 1:34,654,801-34,658,417 | - | C1H1g21259 | C2H1g13678 | LOC_Os01g67410 | Os01g0899800 | - | Detail |
| CX1g001856 | 1:34,668,641-34,674,930 | + | C1H1g15270 | C2H1g15739 | LOC_Os01g67420 | Os01g0900200 | - | Detail |
| CX1g005565 | 1:34,687,349-34,688,707 | + | C1H1g31442 | C2H1g20530 | LOC_Os01g67430 | Os01g0900400 | EG1, eg1 | Detail |
| CX1g005830 | 1:34,699,359-34,700,696 | + | C1H1g09474 | C2H1g20530 | LOC_Os01g67450 | Os01g0900700 | - | Detail |
| CX1g005857 | 1:34,715,761-34,720,403 | + | C1H1g14363 | C2H1g07733 | LOC_Os01g67480 | Os01g0900800 | - | Detail |
| CX1g000615 | 1:34,721,058-34,721,589 | - | C1H1g14549 | C2H1g29765 | LOC_Os01g67490 | Os01g0900900 | - | Detail |
| CX1g005989 | 1:34,726,002-34,728,903 | - | C1H1g27174 | C2H1g26804 | LOC_Os01g67500 | Os01g0901000 | - | Detail |
| CX1g004183 | 1:34,741,738-34,747,018 | - | C1H1g12588 | C2H1g11554 | LOC_Os01g67510 | Os01g0901200 | - | Detail |
| CX1g001539 | 1:34,756,049-34,759,482 | + | C1H1g13500 | C2H1g28157 | LOC_Os01g67530 | Os01g0901500 | - | Detail |
| CX1g003814 | 1:34,765,343-34,768,905 | + | C1H1g11167 | C2H1g14160 | LOC_Os01g67550 | Os01g0901700 | - | Detail |
| CX1g002950 | 1:34,769,605-34,771,813 | - | C1H1g11537 | C2H1g10209 | LOC_Os01g67560 | Os01g0901800 | - | Detail |
| CX1g002071 | 1:34,773,392-34,777,370 | - | C1H1g11165 | C2H1g18397 | LOC_Os01g67570 | Os01g0901900 | OsPAP3 | Detail |
| CX1g003005 | 1:34,778,526-34,784,328 | - | C1H1g07120 | C2H1g27175 | LOC_Os01g67580 | Os01g0902100 | - | Detail |