| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g19767 | 8:15,121,275-15,124,496 | - | C1H8g30278 | CX8g051831 | LOC_Os08g28710 | Os08g0374701 | - | Detail |
| C2H8g22977 | 8:15,137,161-15,143,449 | - | C1H8g03479 | CX8g050795 | LOC_Os08g28730 | Os08g0374800 | Osfc24, OsUGE2, FC24/OsUGE2 | Detail |
| C2H8g13630 | 8:15,148,212-15,150,239 | - | C1H8g29557 | - | LOC_Os08g28740 | Os08g0374900 | - | Detail |
| C2H8g05259 | 8:15,150,858-15,151,166 | + | C1H8g03522 | - | - | - | - | Detail |
| C2H8g22793 | 8:15,151,403-15,151,849 | + | C1H8g21037 | CX8g051236 | - | - | - | Detail |
| C2H8g25045 | 8:15,163,933-15,165,787 | + | C1H8g29076 | CX8g051811 | LOC_Os08g29020 | Os08g0501500 | - | Detail |
| C2H8g13021 | 8:15,169,575-15,169,992 | + | - | - | - | - | - | Detail |
| C2H8g14500 | 8:15,199,178-15,203,504 | + | C1H8g18242 | CX8g054118 | LOC_Os08g28760 | Os08g0375700 | - | Detail |
| C2H8g04590 | 8:15,247,686-15,251,366 | + | C1H8g05287 | CX8g052570 | LOC_Os08g28840 | Os08g0375900 | - | Detail |
| C2H8g13625 | 8:15,256,922-15,259,854 | + | C1H8g14753 | CX8g050967 | LOC_Os08g28860 | Os08g0376200 | - | Detail |
| C2H8g14131 | 8:15,263,635-15,266,955 | - | C1H8g21009 | CX8g050470 | LOC_Os08g28870 | Os08g0376300 | - | Detail |
| C2H8g19942 | 8:15,273,609-15,276,904 | + | C1H8g02054 | CX8g054764 | LOC_Os08g28880 | Os08g0376550 | - | Detail |
| C2H8g17464 | 8:15,287,058-15,293,670 | + | C1H8g13677 | CX8g050879 | LOC_Os08g28890 | Os08g0376600 | - | Detail |
| C2H8g19076 | 8:15,298,457-15,298,695 | + | C1H8g10652 | - | - | - | - | Detail |
| C2H8g16728 | 8:15,312,119-15,316,563 | + | C1H8g03144 | CX8g053091 | LOC_Os08g28940 | Os08g0377100 | - | Detail |
| C2H8g04374 | 8:15,327,050-15,327,845 | + | C1H8g29066 | CX8g053242 | LOC_Os08g28950 | Os08g0377200 | RR12, OsRR12, Rra11, OsRR8, OsRRA11 | Detail |
| C2H8g25366 | 8:15,348,126-15,349,326 | + | C1H8g14468 | CX8g050766 | LOC_Os08g28970 | Os08g0377500 | - | Detail |
| C2H8g07044 | 8:15,349,645-15,352,586 | - | C1H8g30557 | CX8g054003 | LOC_Os08g28980 | Os08g0377400 | - | Detail |
| C2H8g29695 | 8:15,359,864-15,361,745 | - | C1H8g10166 | CX8g053995 | LOC_Os08g29110 | Os08g0378900 | OsTRXz | Detail |
| C2H8g10295 | 8:15,362,865-15,378,768 | - | C1H8g31869 | CX8g051710 | LOC_Os08g29124 | Os08g0379000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006253 | 1:34,461,325-34,461,477 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g002713 | 1:34,465,720-34,468,436 | + | C1H1g01482 | C2H1g22375 | LOC_Os01g67090 | Os01g0896200 | - | Detail |
| CX1g001546 | 1:34,471,924-34,476,790 | + | C1H1g30893 | C2H1g04575 | LOC_Os01g67100 | Os01g0896300 | FSM | Detail |
| CX1g003492 | 1:34,477,347-34,477,847 | - | C1H1g26029 | C2H1g25928 | LOC_Os01g67110 | Os01g0896400 | - | Detail |
| CX1g003887 | 1:34,478,935-34,479,096 | - | - | - | - | - | - | Detail |
| CX1g000252 | 1:34,480,368-34,484,754 | - | C1H1g29763 | C2H1g14182 | LOC_Os01g67120 | Os01g0896500 | - | Detail |
| CX1g000222 | 1:34,487,037-34,489,517 | + | C1H1g30911 | C2H1g29299 | LOC_Os01g67134 | Os01g0896700 | - | Detail |
| CX1g005697 | 1:34,492,202-34,494,633 | + | C1H1g14713 | C2H1g27158 | LOC_Os01g67134 | Os01g0896700 | - | Detail |
| CX1g003038 | 1:34,500,489-34,503,170 | - | C1H1g19882 | C2H1g23719 | LOC_Os01g67160 | Os01g0897000 | OsCDKB1;1 | Detail |
| CX1g002421 | 1:34,506,076-34,508,332 | + | C1H1g17352 | C2H1g07378 | LOC_Os01g67170 | Os01g0897100 | - | Detail |
| CX1g007222 | 1:34,509,651-34,512,173 | - | C1H1g14594 | C2H1g16084 | LOC_Os01g67180 | Os01g0897200 | - | Detail |
| CX1g003511 | 1:34,520,438-34,522,633 | + | C1H1g28282 | C2H1g29383 | LOC_Os01g67210 | Os01g0897500 | - | Detail |
| CX1g005094 | 1:34,525,094-34,529,791 | + | C1H1g13480 | C2H1g08138 | LOC_Os01g67220 | Os01g0897600 | Os1βGlu4 | Detail |
| CX1g000659 | 1:34,531,508-34,531,780 | - | - | - | - | - | - | Detail |
| CX1g001233 | 1:34,535,195-34,539,005 | - | C1H1g31716 | C2H1g28742 | LOC_Os01g67240 | Os01g0897700 | OsFH1 | Detail |
| CX1g000742 | 1:34,547,878-34,557,178 | - | C1H1g23647 | C2H1g17165 | LOC_Os01g67250 | Os01g0897800 | - | Detail |
| CX1g005478 | 1:34,583,582-34,589,110 | - | C1H1g27730 | C2H1g12889 | LOC_Os01g67290 | Os01g0898300 | - | Detail |
| CX1g002008 | 1:34,595,606-34,597,156 | + | C1H1g09687 | C2H1g09014 | LOC_Os01g67300 | Os01g0898400 | - | Detail |
| CX1g006649 | 1:34,598,130-34,600,271 | + | C1H1g23893 | C2H1g04830 | LOC_Os01g67310 | Os01g0898500 | - | Detail |
| CX1g000739 | 1:34,601,901-34,604,187 | - | C1H1g03088 | C2H1g01136 | LOC_Os01g67314 | Os01g0898600 | - | Detail |