| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g14338 | 5:23,868,931-23,876,697 | - | C1H5g07868 | CX5g037010 | LOC_Os05g49590 | Os05g0571000 | - | Detail |
| C2H5g15890 | 5:23,882,860-23,884,392 | + | C1H5g09249 | CX5g038156 | LOC_Os05g49610 | Os05g0571100 | - | Detail |
| C2H5g15353 | 5:23,890,748-23,891,029 | + | C1H5g06315 | CX5g039972 | LOC_Os05g49620 | Os05g0571200 | OsWRKY19 | Detail |
| C2H5g11276 | 5:23,891,281-23,891,796 | + | C1H5g19986 | CX5g039972 | LOC_Os05g49620 | Os05g0571200 | OsWRKY19 | Detail |
| C2H5g07321 | 5:23,892,025-23,894,896 | - | C1H5g04002 | CX5g039084 | LOC_Os05g49640 | - | - | Detail |
| C2H5g09536 | 5:23,895,915-23,897,740 | - | C1H5g05630 | CX5g039473 | LOC_Os05g49650 | Os05g0571400 | - | Detail |
| C2H5g14116 | 5:23,898,619-23,902,218 | - | C1H5g23505 | CX5g037409 | LOC_Os05g49680 | Os05g0571700 | - | Detail |
| C2H5g01741 | 5:23,905,975-23,906,802 | - | C1H5g31650 | CX5g038122 | LOC_Os05g49700 | Os05g0572000 | OsRPH1 | Detail |
| C2H5g01004 | 5:23,915,973-23,918,002 | - | C1H5g09233 | CX5g040343 | LOC_Os05g49730 | Os05g0572700 | - | Detail |
| C2H5g20444 | 5:23,925,945-23,928,008 | - | C1H5g26987 | CX5g037759 | LOC_Os05g49740 | Os05g0572900 | - | Detail |
| C2H5g08690 | 5:23,929,370-23,932,564 | - | C1H5g12531 | CX5g039397 | LOC_Os05g49750 | Os05g0573000 | - | Detail |
| C2H5g17652 | 5:23,935,405-23,938,609 | + | C1H5g06006 | CX5g036976 | LOC_Os05g49760 | Os05g0573200 | - | Detail |
| C2H5g07346 | 5:23,938,828-23,945,135 | - | C1H5g18333 | CX5g036857 | LOC_Os05g49770 | Os05g0573300 | - | Detail |
| C2H5g13745 | 5:23,965,402-23,968,553 | + | C1H5g30361 | CX5g039933 | LOC_Os05g49780 | Os05g0573500 | HAP3C, OsHAP3C, OsNF-YB-4, NFYB4 | Detail |
| C2H5g25143 | 5:23,970,861-23,971,274 | - | C1H5g18248 | CX5g040236 | LOC_Os05g49790 | Os05g0573600 | - | Detail |
| C2H5g09568 | 5:23,973,438-23,976,872 | - | C1H5g00854 | CX5g037555 | LOC_Os05g49800 | Os05g0573700 | - | Detail |
| C2H5g06151 | 5:23,979,142-23,980,140 | + | C1H5g11098 | CX5g040047 | LOC_Os05g49810 | Os05g0573800 | - | Detail |
| C2H5g07066 | 5:23,981,387-23,983,427 | + | C1H5g11098 | CX5g040047 | LOC_Os05g49810 | Os05g0573800 | - | Detail |
| C2H5g06386 | 5:23,983,736-23,987,904 | - | C1H5g10056 | CX5g037660 | LOC_Os05g49820 | Os05g0573900 | - | Detail |
| C2H5g04324 | 5:23,991,609-23,992,927 | + | C1H5g18130 | CX5g038298 | LOC_Os05g49830 | Os05g0574000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000627 | 1:34,319,962-34,320,339 | + | - | - | - | Os01g0891033 | - | Detail |
| CX1g003946 | 1:34,323,575-34,325,423 | + | C1H1g19630 | C2H1g30359 | LOC_Os01g66710 | Os01g0623600 | - | Detail |
| CX1g002014 | 1:34,327,166-34,329,295 | + | C1H1g26350 | C2H1g30414 | LOC_Os01g66720 | Os01g0891300 | - | Detail |
| CX1g002591 | 1:34,330,403-34,333,092 | - | C1H1g20377 | C2H1g16879 | LOC_Os01g66730 | Os01g0891400 | - | Detail |
| CX1g005535 | 1:34,335,296-34,336,141 | + | C1H1g08607 | C2H1g27326 | LOC_Os01g66820 | Os01g0892300 | - | Detail |
| CX1g006423 | 1:34,369,433-34,369,606 | - | - | - | - | - | - | Detail |
| CX1g006441 | 1:34,370,763-34,374,042 | + | C1H1g20700 | C2H1g05403 | LOC_Os01g66860 | Os01g0892800 | - | Detail |
| CX1g000329 | 1:34,383,153-34,384,370 | + | - | C2H1g00114 | LOC_Os01g66700 | Os01g0891000 | - | Detail |
| CX1g003394 | 1:34,386,647-34,388,597 | + | C1H1g19705 | C2H1g12836 | LOC_Os01g66890 | Os01g0893400 | - | Detail |
| CX1g001996 | 1:34,391,244-34,396,294 | - | C1H1g17433 | C2H1g12267 | LOC_Os01g66900 | Os01g0893700 | - | Detail |
| CX1g004421 | 1:34,402,909-34,403,426 | - | C1H1g27447 | C2H1g08390 | - | - | - | Detail |
| CX1g001005 | 1:34,405,210-34,408,676 | + | C1H1g30439 | C2H1g29880 | LOC_Os01g66920 | Os01g0894000 | - | Detail |
| CX1g003625 | 1:34,412,217-34,414,377 | - | C1H1g12515 | C2H1g06719 | LOC_Os01g66940 | Os01g0894300 | - | Detail |
| CX1g002052 | 1:34,418,106-34,420,146 | + | C1H1g10154 | C2H1g21200 | LOC_Os01g66960 | Os01g0894500 | - | Detail |
| CX1g006885 | 1:34,421,675-34,424,200 | - | C1H1g26928 | C2H1g25022 | LOC_Os01g66970 | Os01g0894600 | - | Detail |
| CX1g004652 | 1:34,427,512-34,429,429 | - | C1H1g16084 | C2H1g27913 | LOC_Os01g66980 | Os01g0894700 | - | Detail |
| CX1g001151 | 1:34,437,418-34,441,505 | - | C1H1g16957 | C2H1g00638 | LOC_Os01g67000 | Os01g0895100 | - | Detail |
| CX1g006213 | 1:34,442,616-34,444,162 | + | C1H1g02433 | C2H1g18438 | LOC_Os01g67010 | Os01g0895200 | - | Detail |
| CX1g003616 | 1:34,450,736-34,452,126 | + | C1H1g06118 | C2H1g11785 | LOC_Os01g67030 | Os01g0895300 | - | Detail |
| CX1g004536 | 1:34,457,518-34,460,722 | - | C1H1g22691 | C2H1g22365 | LOC_Os01g67054 | Os01g0895600 | OsCRT3 | Detail |