| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g07379 | 7:1,284,437-1,284,955 | + | C2H7g30099 | CX7g046883 | LOC_Os07g03690 | Os07g0128800 | - | Detail |
| C1H7g03279 | 7:1,291,717-1,292,223 | + | C2H7g02005 | CX7g046883 | LOC_Os07g03710 | Os07g0129200 | PR1A, OsPR1a, OsPR-1a, PR1a, OsPR1#074, OsPR1-74, PR-1a, OsSCP, SCP | Detail |
| C1H7g25003 | 7:1,303,236-1,305,696 | - | C2H7g21640 | CX7g049764 | LOC_Os07g03760 | - | - | Detail |
| C1H7g21106 | 7:1,333,451-1,339,476 | + | C2H7g07364 | CX7g047059 | LOC_Os07g03770 | Os07g0129700 | OSH15, Oskn3 | Detail |
| C1H7g23406 | 7:1,344,162-1,344,768 | - | C2H7g12349 | - | LOC_Os07g03780 | Os07g0129800 | - | Detail |
| C1H7g13341 | 7:1,348,098-1,350,020 | - | C2H7g17374 | - | LOC_Os07g03790 | Os07g0129900 | - | Detail |
| C1H7g01046 | 7:1,354,016-1,357,784 | + | C2H7g09208 | - | - | Os07g0130000 | - | Detail |
| C1H7g10554 | 7:1,358,011-1,360,053 | - | C2H7g28273 | - | LOC_Os07g03810 | Os07g0130100 | - | Detail |
| C1H7g13345 | 7:1,362,971-1,365,064 | - | C2H7g22634 | - | LOC_Os07g03820 | Os07g0130200 | - | Detail |
| C1H7g20486 | 7:1,366,531-1,369,170 | - | C2H7g04790 | - | LOC_Os07g03830 | Os07g0131375 | - | Detail |
| C1H7g13914 | 7:1,370,512-1,372,590 | - | C2H7g13157 | - | LOC_Os07g03840 | Os07g0130400 | - | Detail |
| C1H7g22179 | 7:1,373,843-1,374,382 | - | - | - | - | - | - | Detail |
| C1H7g21616 | 7:1,375,748-1,377,748 | - | C2H7g09954 | - | LOC_Os07g03890 | Os07g0262800 | - | Detail |
| C1H7g05952 | 7:1,379,335-1,381,323 | - | C2H7g14045 | - | LOC_Os07g03860 | Os07g0131375 | - | Detail |
| C1H7g30530 | 7:1,382,905-1,384,935 | - | C2H7g25684 | - | LOC_Os07g03870 | Os07g0130800 | - | Detail |
| C1H7g17964 | 7:1,383,025-1,383,546 | + | C2H7g18582 | - | LOC_Os07g03849 | Os07g0130500 | - | Detail |
| C1H7g19523 | 7:1,389,128-1,391,047 | - | - | - | - | - | - | Detail |
| C1H7g31707 | 7:1,391,236-1,396,119 | - | C2H7g19397 | - | LOC_Os07g03880 | Os07g0262800 | - | Detail |
| C1H7g19595 | 7:1,391,252-1,392,807 | + | C2H7g18582 | - | LOC_Os07g03849 | Os07g0130500 | - | Detail |
| C1H7g21406 | 7:1,396,162-1,403,733 | - | C2H7g17372 | - | LOC_Os07g03890 | Os07g0131375 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000627 | 1:34,319,962-34,320,339 | + | - | - | - | Os01g0891033 | - | Detail |
| CX1g003946 | 1:34,323,575-34,325,423 | + | C1H1g19630 | C2H1g30359 | LOC_Os01g66710 | Os01g0623600 | - | Detail |
| CX1g002014 | 1:34,327,166-34,329,295 | + | C1H1g26350 | C2H1g30414 | LOC_Os01g66720 | Os01g0891300 | - | Detail |
| CX1g002591 | 1:34,330,403-34,333,092 | - | C1H1g20377 | C2H1g16879 | LOC_Os01g66730 | Os01g0891400 | - | Detail |
| CX1g005535 | 1:34,335,296-34,336,141 | + | C1H1g08607 | C2H1g27326 | LOC_Os01g66820 | Os01g0892300 | - | Detail |
| CX1g006423 | 1:34,369,433-34,369,606 | - | - | - | - | - | - | Detail |
| CX1g006441 | 1:34,370,763-34,374,042 | + | C1H1g20700 | C2H1g05403 | LOC_Os01g66860 | Os01g0892800 | - | Detail |
| CX1g000329 | 1:34,383,153-34,384,370 | + | - | C2H1g00114 | LOC_Os01g66700 | Os01g0891000 | - | Detail |
| CX1g003394 | 1:34,386,647-34,388,597 | + | C1H1g19705 | C2H1g12836 | LOC_Os01g66890 | Os01g0893400 | - | Detail |
| CX1g001996 | 1:34,391,244-34,396,294 | - | C1H1g17433 | C2H1g12267 | LOC_Os01g66900 | Os01g0893700 | - | Detail |
| CX1g004421 | 1:34,402,909-34,403,426 | - | C1H1g27447 | C2H1g08390 | - | - | - | Detail |
| CX1g001005 | 1:34,405,210-34,408,676 | + | C1H1g30439 | C2H1g29880 | LOC_Os01g66920 | Os01g0894000 | - | Detail |
| CX1g003625 | 1:34,412,217-34,414,377 | - | C1H1g12515 | C2H1g06719 | LOC_Os01g66940 | Os01g0894300 | - | Detail |
| CX1g002052 | 1:34,418,106-34,420,146 | + | C1H1g10154 | C2H1g21200 | LOC_Os01g66960 | Os01g0894500 | - | Detail |
| CX1g006885 | 1:34,421,675-34,424,200 | - | C1H1g26928 | C2H1g25022 | LOC_Os01g66970 | Os01g0894600 | - | Detail |
| CX1g004652 | 1:34,427,512-34,429,429 | - | C1H1g16084 | C2H1g27913 | LOC_Os01g66980 | Os01g0894700 | - | Detail |
| CX1g001151 | 1:34,437,418-34,441,505 | - | C1H1g16957 | C2H1g00638 | LOC_Os01g67000 | Os01g0895100 | - | Detail |
| CX1g006213 | 1:34,442,616-34,444,162 | + | C1H1g02433 | C2H1g18438 | LOC_Os01g67010 | Os01g0895200 | - | Detail |
| CX1g003616 | 1:34,450,736-34,452,126 | + | C1H1g06118 | C2H1g11785 | LOC_Os01g67030 | Os01g0895300 | - | Detail |
| CX1g004536 | 1:34,457,518-34,460,722 | - | C1H1g22691 | C2H1g22365 | LOC_Os01g67054 | Os01g0895600 | OsCRT3 | Detail |