| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02733 | 1:884,535-889,937 | + | C1H1g26055 | - | LOC_Os01g02890 | Os01g0118300 | SUI1, OsSUI1, OsPSS-1, PSS-1, OsPSS1, PSS1 | Detail |
| C2H1g25728 | 1:894,155-897,038 | - | C1H1g13587 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C2H1g24887 | 1:905,925-909,298 | - | C1H1g19340 | - | LOC_Os01g02910 | Os01g0118600 | - | Detail |
| C2H1g16133 | 1:911,678-914,437 | - | C1H1g28376 | - | LOC_Os01g02920 | Os01g0118700 | - | Detail |
| C2H1g28060 | 1:918,001-920,692 | - | C1H1g06299 | - | LOC_Os01g02930 | Os01g0119000 | - | Detail |
| C2H1g09306 | 1:929,892-933,650 | - | C1H1g29708 | - | LOC_Os01g02940 | Os01g0119100 | - | Detail |
| C2H1g08550 | 1:940,072-940,593 | + | C1H1g13986 | - | - | - | - | Detail |
| C2H1g16398 | 1:943,043-943,377 | - | - | - | - | - | - | Detail |
| C2H1g12790 | 1:949,262-951,056 | - | C1H1g01366 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C2H1g11248 | 1:951,971-959,371 | - | C1H1g03260 | CX1g005069 | LOC_Os01g03020 | Os01g0120300 | - | Detail |
| C2H1g00360 | 1:959,862-962,390 | - | C1H1g11508 | CX1g001161 | LOC_Os01g03030 | Os01g0120400 | - | Detail |
| C2H1g23693 | 1:963,663-965,148 | - | C1H1g03575 | CX1g002228 | LOC_Os01g03040 | Os01g0120500 | - | Detail |
| C2H1g04453 | 1:966,291-968,290 | + | C1H1g25620 | CX1g000645 | LOC_Os01g03050 | Os01g0120600 | - | Detail |
| C2H1g02238 | 1:969,438-970,298 | - | - | CX1g004156 | LOC_Os01g03060 | Os01g0120700 | OsHRC | Detail |
| C2H1g07428 | 1:972,581-979,601 | - | C1H1g21397 | CX1g002673 | LOC_Os01g03070 | Os01g0120800 | - | Detail |
| C2H1g00585 | 1:982,117-982,722 | + | - | CX1g000024 | LOC_Os01g03080 | Os01g0121000 | - | Detail |
| C2H1g24271 | 1:984,465-987,582 | + | C1H1g11884 | CX1g003419 | LOC_Os01g03090 | Os01g0121100 | - | Detail |
| C2H1g00075 | 1:988,256-990,528 | - | C1H1g21163 | CX1g006351 | LOC_Os01g03100 | Os01g0121200 | - | Detail |
| C2H1g03352 | 1:998,181-1,003,121 | - | C1H1g02205 | CX1g000986 | LOC_Os01g03110 | Os01g0121300 | - | Detail |
| C2H1g22579 | 1:1,018,666-1,019,160 | - | C1H1g30654 | CX1g006139 | LOC_Os01g03130 | Os01g0121500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005520 | 1:3,196,065-3,196,412 | - | C1H1g30232 | C2H1g06196 | LOC_Os01g07620 | Os01g0170900 | - | Detail |
| CX1g000199 | 1:3,198,866-3,203,894 | - | C1H1g10821 | C2H1g29680 | LOC_Os01g07630 | Os01g0171000 | - | Detail |
| CX1g001021 | 1:3,209,846-3,212,713 | - | C1H1g27422 | C2H1g04571 | LOC_Os01g07640 | Os01g0171100 | - | Detail |
| CX1g000373 | 1:3,219,436-3,219,877 | + | - | - | - | - | - | Detail |
| CX1g001907 | 1:3,235,562-3,238,328 | - | C1H1g10155 | C2H1g23784 | LOC_Os01g07700 | Os01g0171800 | - | Detail |
| CX1g002415 | 1:3,243,058-3,245,311 | + | C1H1g26958 | C2H1g20738 | LOC_Os01g07710 | - | - | Detail |
| CX1g006763 | 1:3,246,369-3,249,582 | - | C1H1g20095 | C2H1g20386 | LOC_Os01g07720 | Os01g0172000 | - | Detail |
| CX1g003588 | 1:3,252,069-3,254,053 | + | C1H1g10981 | C2H1g03942 | LOC_Os01g07730 | Os01g0172100 | - | Detail |
| CX1g004788 | 1:3,254,755-3,258,980 | - | C1H1g04902 | C2H1g18220 | LOC_Os01g07740 | Os01g0172200 | OsDB10 | Detail |
| CX1g001295 | 1:3,261,029-3,263,521 | - | C1H1g23634 | C2H1g18869 | LOC_Os01g07750 | Os01g0172300 | - | Detail |
| CX1g001900 | 1:3,264,981-3,268,433 | - | C1H1g21846 | C2H1g28778 | LOC_Os01g07760 | Os01g0172400 | - | Detail |
| CX1g005114 | 1:3,271,274-3,273,173 | + | C1H1g19012 | C2H1g21544 | LOC_Os01g07770 | Os01g0172600 | - | Detail |
| CX1g002646 | 1:3,275,646-3,276,218 | + | C1H1g10453 | C2H1g20728 | LOC_Os01g07780 | Os01g0172800 | - | Detail |
| CX1g000708 | 1:3,277,374-3,280,290 | + | C1H1g07102 | C2H1g22521 | LOC_Os01g07790 | Os01g0172900 | - | Detail |
| CX1g005561 | 1:3,280,448-3,281,707 | - | C1H1g22748 | C2H1g05856 | LOC_Os01g07800 | Os01g0173000 | - | Detail |
| CX1g002508 | 1:3,282,622-3,284,039 | - | C1H1g06548 | C2H1g12136 | LOC_Os01g07810 | Os01g0173100 | - | Detail |
| CX1g005870 | 1:3,296,607-3,298,321 | + | C1H1g18797 | C2H1g26590 | LOC_Os01g07850 | Os01g0173600 | - | Detail |
| CX1g003563 | 1:3,302,946-3,303,194 | + | - | - | - | - | - | Detail |
| CX1g004204 | 1:3,304,075-3,304,320 | - | - | - | LOC_Os12g41550 | Os12g0609100 | - | Detail |
| CX1g006575 | 1:3,311,399-3,311,623 | + | - | - | - | - | - | Detail |