| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g26147 | 3:29,070,012-29,073,995 | - | C2H3g04730 | CX3g031002 | LOC_Os03g54160 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| C1H3g02420 | 3:29,085,506-29,088,803 | - | C2H3g23019 | CX3g026708 | LOC_Os03g54160 | Os03g0752800 | MADS14, OsMADS14, FDRMADS6, RMADS211, AGL10, RAP1B | Detail |
| C1H3g27451 | 3:29,096,276-29,101,760 | - | C2H3g26552 | CX3g031002 | LOC_Os03g54170 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| C1H3g02242 | 3:29,102,198-29,102,386 | - | C2H3g26951 | CX3g031002 | LOC_Os03g54170 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| C1H3g27471 | 3:29,119,242-29,120,381 | + | C2H3g04287 | CX3g026043 | - | - | - | Detail |
| C1H3g27092 | 3:29,121,877-29,125,562 | - | C2H3g04194 | CX3g027702 | LOC_Os03g54750 | Os03g0754500 | - | Detail |
| C1H3g31483 | 3:29,129,030-29,132,412 | + | C2H3g28760 | CX3g030330 | LOC_Os03g54760 | Os03g0754800 | - | Detail |
| C1H3g01206 | 3:29,134,980-29,139,800 | + | C2H3g21643 | CX3g030692 | LOC_Os03g54770 | Os03g0754900 | - | Detail |
| C1H3g11086 | 3:29,140,364-29,149,350 | + | C2H3g21643 | CX3g030684 | LOC_Os03g54780 | Os03g0755000 | - | Detail |
| C1H3g02500 | 3:29,150,305-29,155,599 | + | C2H3g18088 | CX3g030008 | LOC_Os03g54790 | Os03g0755900 | - | Detail |
| C1H3g16167 | 3:29,158,887-29,161,287 | + | C2H3g29659 | CX3g026242 | LOC_Os03g54870 | Os03g0755600 | - | Detail |
| C1H3g22849 | 3:29,162,291-29,163,604 | + | C2H3g29659 | - | LOC_Os03g54860 | Os03g0755625 | - | Detail |
| C1H3g28843 | 3:29,167,429-29,168,265 | + | C2H3g18088 | CX3g030008 | LOC_Os03g54790 | Os03g0755100 | ALS1, OsALS1, OsABCB25 | Detail |
| C1H3g23278 | 3:29,173,703-29,175,359 | + | C2H3g30501 | CX7g046958 | LOC_Os03g54890 | Os03g0756000 | - | Detail |
| C1H3g18285 | 3:29,177,473-29,182,434 | - | C2H3g18957 | CX3g029420 | LOC_Os03g54900 | Os03g0756200 | - | Detail |
| C1H3g24157 | 3:29,187,079-29,188,859 | - | C2H3g16088 | CX3g031296 | LOC_Os03g54910 | Os03g0756300 | - | Detail |
| C1H3g08569 | 3:29,191,173-29,194,316 | - | C2H3g07304 | CX3g026830 | LOC_Os03g54920 | Os03g0756400 | - | Detail |
| C1H3g25183 | 3:29,195,731-29,202,063 | - | C2H3g22264 | CX3g027104 | LOC_Os03g54930 | Os03g0756500 | - | Detail |
| C1H3g07989 | 3:29,206,938-29,212,229 | - | C2H3g18479 | CX3g027732 | LOC_Os03g54970 | Os03g0756700 | - | Detail |
| C1H3g04866 | 3:29,212,412-29,216,380 | + | C2H3g11581 | CX3g030336 | LOC_Os03g54980 | Os03g0756800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005520 | 1:3,196,065-3,196,412 | - | C1H1g30232 | C2H1g06196 | LOC_Os01g07620 | Os01g0170900 | - | Detail |
| CX1g000199 | 1:3,198,866-3,203,894 | - | C1H1g10821 | C2H1g29680 | LOC_Os01g07630 | Os01g0171000 | - | Detail |
| CX1g001021 | 1:3,209,846-3,212,713 | - | C1H1g27422 | C2H1g04571 | LOC_Os01g07640 | Os01g0171100 | - | Detail |
| CX1g000373 | 1:3,219,436-3,219,877 | + | - | - | - | - | - | Detail |
| CX1g001907 | 1:3,235,562-3,238,328 | - | C1H1g10155 | C2H1g23784 | LOC_Os01g07700 | Os01g0171800 | - | Detail |
| CX1g002415 | 1:3,243,058-3,245,311 | + | C1H1g26958 | C2H1g20738 | LOC_Os01g07710 | - | - | Detail |
| CX1g006763 | 1:3,246,369-3,249,582 | - | C1H1g20095 | C2H1g20386 | LOC_Os01g07720 | Os01g0172000 | - | Detail |
| CX1g003588 | 1:3,252,069-3,254,053 | + | C1H1g10981 | C2H1g03942 | LOC_Os01g07730 | Os01g0172100 | - | Detail |
| CX1g004788 | 1:3,254,755-3,258,980 | - | C1H1g04902 | C2H1g18220 | LOC_Os01g07740 | Os01g0172200 | OsDB10 | Detail |
| CX1g001295 | 1:3,261,029-3,263,521 | - | C1H1g23634 | C2H1g18869 | LOC_Os01g07750 | Os01g0172300 | - | Detail |
| CX1g001900 | 1:3,264,981-3,268,433 | - | C1H1g21846 | C2H1g28778 | LOC_Os01g07760 | Os01g0172400 | - | Detail |
| CX1g005114 | 1:3,271,274-3,273,173 | + | C1H1g19012 | C2H1g21544 | LOC_Os01g07770 | Os01g0172600 | - | Detail |
| CX1g002646 | 1:3,275,646-3,276,218 | + | C1H1g10453 | C2H1g20728 | LOC_Os01g07780 | Os01g0172800 | - | Detail |
| CX1g000708 | 1:3,277,374-3,280,290 | + | C1H1g07102 | C2H1g22521 | LOC_Os01g07790 | Os01g0172900 | - | Detail |
| CX1g005561 | 1:3,280,448-3,281,707 | - | C1H1g22748 | C2H1g05856 | LOC_Os01g07800 | Os01g0173000 | - | Detail |
| CX1g002508 | 1:3,282,622-3,284,039 | - | C1H1g06548 | C2H1g12136 | LOC_Os01g07810 | Os01g0173100 | - | Detail |
| CX1g005870 | 1:3,296,607-3,298,321 | + | C1H1g18797 | C2H1g26590 | LOC_Os01g07850 | Os01g0173600 | - | Detail |
| CX1g003563 | 1:3,302,946-3,303,194 | + | - | - | - | - | - | Detail |
| CX1g004204 | 1:3,304,075-3,304,320 | - | - | - | LOC_Os12g41550 | Os12g0609100 | - | Detail |
| CX1g006575 | 1:3,311,399-3,311,623 | + | - | - | - | - | - | Detail |