| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g19266 | 1:31,509,696-31,513,272 | - | C1H1g00383 | CX1g001311 | LOC_Os01g61580 | Os01g0832200 | - | Detail |
| C2H1g14897 | 1:31,519,060-31,524,680 | + | C1H1g00574 | CX1g004790 | LOC_Os01g61590 | Os01g0832300 | OsCPK3 | Detail |
| C2H1g11131 | 1:31,539,536-31,545,198 | + | C1H1g31694 | CX1g000601 | LOC_Os01g61610 | Os01g0832600 | - | Detail |
| C2H1g22191 | 1:31,557,505-31,562,700 | + | C1H1g07002 | CX1g006439 | LOC_Os01g61620 | Os01g0832900 | - | Detail |
| C2H1g03571 | 1:31,563,054-31,565,051 | + | C1H1g10107 | CX1g006609 | LOC_Os01g61630 | Os01g0833000 | - | Detail |
| C2H1g17085 | 1:31,565,343-31,568,129 | - | C1H1g13635 | CX1g003404 | LOC_Os01g61640 | Os01g0833100 | - | Detail |
| C2H1g00983 | 1:31,572,935-31,573,270 | + | C1H1g07003 | CX1g003333 | LOC_Os01g61670 | Os01g0833150 | - | Detail |
| C2H1g27052 | 1:31,573,508-31,576,185 | + | C1H1g07003 | CX1g003333 | LOC_Os01g61670 | Os01g0833200 | - | Detail |
| C2H1g24837 | 1:31,577,218-31,577,884 | + | C1H1g07552 | CX1g005332 | LOC_Os01g61680 | Os01g0833400 | - | Detail |
| C2H1g22767 | 1:31,578,637-31,582,534 | - | C1H1g26345 | CX1g001176 | LOC_Os01g61690 | Os01g0833500 | - | Detail |
| C2H1g05497 | 1:31,583,766-31,584,739 | - | C1H1g02922 | CX1g000140 | LOC_Os01g61700 | Os01g0833600 | - | Detail |
| C2H1g26726 | 1:31,585,550-31,592,623 | - | C1H1g09497 | CX1g003313 | LOC_Os01g61710 | Os01g0833700 | - | Detail |
| C2H1g11920 | 1:31,594,680-31,598,908 | - | C1H1g22933 | CX1g003450 | LOC_Os01g61720 | Os01g0833800 | - | Detail |
| C2H1g18321 | 1:31,610,325-31,616,645 | + | C1H1g06428 | CX1g005181 | - | Os01g0663400 | - | Detail |
| C2H1g11202 | 1:31,625,734-31,626,432 | + | C1H1g08789 | - | LOC_Os01g61750 | - | - | Detail |
| C2H1g03973 | 1:31,626,307-31,630,738 | - | C1H1g12416 | CX1g000146 | LOC_Os01g61760 | Os01g0834100 | - | Detail |
| C2H1g25411 | 1:31,635,422-31,646,181 | + | C1H1g06212 | CX1g002696 | LOC_Os01g61780 | Os01g0834200 | - | Detail |
| C2H1g04378 | 1:31,652,315-31,654,763 | - | C1H1g30061 | CX1g000392 | LOC_Os01g61810 | Os01g0834400 | HAP3A, OsHAP3A, OsNF-YB-2, NFYB2 | Detail |
| C2H1g11057 | 1:31,654,816-31,655,016 | - | C1H1g30061 | CX1g000392 | LOC_Os01g61810 | Os01g0834400 | HAP3A, OsHAP3A, OsNF-YB-2, NFYB2 | Detail |
| C2H1g10042 | 1:31,660,441-31,661,642 | - | C1H1g07712 | CX1g001710 | LOC_Os01g61814 | Os01g0834500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000226 | 1:34,083,561-34,086,020 | + | C1H1g29332 | C2H1g01164 | LOC_Os01g66250 | Os01g0885700 | SDRLK-17 | Detail |
| CX1g003973 | 1:34,091,911-34,092,618 | + | C1H1g27742 | C2H1g00754 | LOC_Os01g66270 | Os01g0885900 | - | Detail |
| CX1g003328 | 1:34,094,231-34,096,803 | - | C1H1g03785 | C2H1g29714 | LOC_Os01g66280 | Os01g0886000 | - | Detail |
| CX1g005146 | 1:34,101,935-34,102,108 | + | - | - | - | - | - | Detail |
| CX1g007029 | 1:34,105,431-34,108,279 | + | C1H1g16950 | C2H1g10247 | LOC_Os01g66290 | Os01g0886200 | - | Detail |
| CX1g005400 | 1:34,112,975-34,113,316 | + | - | - | - | - | - | Detail |
| CX1g005699 | 1:34,113,469-34,117,075 | + | C1H1g22195 | C2H1g02946 | LOC_Os01g66300 | Os01g0886300 | - | Detail |
| CX1g003847 | 1:34,119,790-34,121,861 | - | C1H1g24324 | C2H1g26611 | LOC_Os01g66320 | Os01g0886500 | - | Detail |
| CX1g001643 | 1:34,122,993-34,128,358 | - | C1H1g06569 | C2H1g25926 | LOC_Os01g66330 | Os01g0886600 | - | Detail |
| CX1g002780 | 1:34,136,403-34,140,949 | + | C1H1g09303 | C2H1g16527 | LOC_Os01g66350 | Os01g0886900 | - | Detail |
| CX1g001757 | 1:34,142,847-34,145,750 | + | C1H1g04514 | C2H1g22994 | LOC_Os01g66360 | Os01g0887100 | - | Detail |
| CX1g005333 | 1:34,146,321-34,151,069 | - | C1H1g16536 | C2H1g01577 | LOC_Os01g66379 | Os01g0887400 | - | Detail |
| CX1g003758 | 1:34,158,408-34,158,557 | - | - | - | - | Os01g0887550 | - | Detail |
| CX1g004709 | 1:34,160,194-34,165,051 | - | C1H1g11314 | C2H1g28074 | LOC_Os01g66420 | Os01g0887700 | - | Detail |
| CX1g007087 | 1:34,168,208-34,170,915 | + | C1H1g19688 | C2H1g23351 | LOC_Os01g66440 | - | - | Detail |
| CX1g000045 | 1:34,171,916-34,172,179 | - | C1H1g03558 | - | - | Os01g0888022 | - | Detail |
| CX1g001905 | 1:34,188,568-34,190,492 | + | C1H1g13104 | C2H1g28944 | LOC_Os01g66490 | Os01g0888300 | - | Detail |
| CX1g002416 | 1:34,196,510-34,200,848 | - | C1H1g03540 | C2H1g16784 | LOC_Os01g66500 | Os01g0888500 | - | Detail |
| CX1g004975 | 1:34,205,095-34,208,666 | + | C1H1g07656 | C2H1g08009 | LOC_Os01g66510 | Os01g0888600 | - | Detail |
| CX1g003196 | 1:34,209,258-34,212,540 | - | C1H1g05592 | C2H1g13613 | LOC_Os01g66520 | Os01g0888700 | - | Detail |