| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g21556 | 9:17,127,349-17,133,457 | - | C2H9g08359 | CX9g057694 | LOC_Os09g35760 | Os09g0526300 | - | Detail |
| C1H9g19093 | 9:17,139,670-17,140,260 | + | - | CX9g056474 | LOC_Os09g35780 | Os09g0526500 | - | Detail |
| C1H9g12923 | 9:17,146,380-17,146,933 | - | C2H9g23914 | - | - | - | - | Detail |
| C1H9g05187 | 9:17,148,932-17,150,504 | - | C2H9g25457 | CX9g056876 | LOC_Os09g35790 | Os09g0526600 | - | Detail |
| C1H9g15216 | 9:17,155,623-17,157,739 | - | C2H9g28414 | CX9g055153 | LOC_Os09g35800 | Os09g0526700 | - | Detail |
| C1H9g04329 | 9:17,161,222-17,163,941 | - | C2H9g05438 | CX9g057418 | LOC_Os09g35810 | Os09g0526800 | - | Detail |
| C1H9g13766 | 9:17,173,966-17,175,193 | + | C2H9g26745 | CX9g055265 | LOC_Os09g35830 | Os09g0527100 | - | Detail |
| C1H9g12148 | 9:17,182,248-17,183,559 | + | C2H9g10324 | - | LOC_Os09g35850 | Os09g0527500 | - | Detail |
| C1H9g01116 | 9:17,183,602-17,186,780 | + | C2H9g10324 | CX9g055830 | LOC_Os09g35850 | Os09g0527500 | - | Detail |
| C1H9g07362 | 9:17,190,988-17,192,576 | + | C2H9g01691 | CX9g055927 | LOC_Os09g35860 | Os09g0527600 | - | Detail |
| C1H9g25049 | 9:17,195,929-17,196,462 | - | C2H9g08969 | CX9g056672 | LOC_Os09g35870 | Os09g0527700 | - | Detail |
| C1H9g07553 | 9:17,200,149-17,203,100 | - | C2H9g07509 | CX9g055267 | LOC_Os09g35880 | Os09g0527900 | - | Detail |
| C1H9g01949 | 9:17,208,904-17,212,955 | + | C2H9g28114 | CX9g055134 | LOC_Os09g35890 | Os09g0528000 | - | Detail |
| C1H9g14577 | 9:17,213,730-17,213,993 | + | - | CX9g056632 | LOC_Os09g35900 | Os09g0528100 | - | Detail |
| C1H9g05805 | 9:17,224,444-17,225,287 | + | C2H9g04300 | CX9g055268 | LOC_Os09g35910 | Os09g0528200 | - | Detail |
| C1H9g07637 | 9:17,228,909-17,231,126 | - | C2H9g16123 | CX9g055503 | LOC_Os09g35920 | Os09g0528300 | - | Detail |
| C1H9g29475 | 9:17,242,233-17,244,144 | + | C2H9g26896 | CX9g055183 | LOC_Os09g35940 | Os09g0528700 | - | Detail |
| C1H9g30526 | 9:17,270,916-17,275,957 | - | C2H9g28773 | CX9g055032 | LOC_Os09g35960 | Os09g0528800 | - | Detail |
| C1H9g28769 | 9:17,279,664-17,282,648 | - | C2H9g02120 | CX9g056476 | LOC_Os09g35970 | Os09g0529100 | - | Detail |
| C1H9g03629 | 9:17,285,519-17,293,203 | - | C2H9g25877 | CX9g055769 | LOC_Os09g35980 | Os09g0529300 | SPK, Spk(t), Spk, OsTAC1, TAC1, qTAC9 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000226 | 1:34,083,561-34,086,020 | + | C1H1g29332 | C2H1g01164 | LOC_Os01g66250 | Os01g0885700 | SDRLK-17 | Detail |
| CX1g003973 | 1:34,091,911-34,092,618 | + | C1H1g27742 | C2H1g00754 | LOC_Os01g66270 | Os01g0885900 | - | Detail |
| CX1g003328 | 1:34,094,231-34,096,803 | - | C1H1g03785 | C2H1g29714 | LOC_Os01g66280 | Os01g0886000 | - | Detail |
| CX1g005146 | 1:34,101,935-34,102,108 | + | - | - | - | - | - | Detail |
| CX1g007029 | 1:34,105,431-34,108,279 | + | C1H1g16950 | C2H1g10247 | LOC_Os01g66290 | Os01g0886200 | - | Detail |
| CX1g005400 | 1:34,112,975-34,113,316 | + | - | - | - | - | - | Detail |
| CX1g005699 | 1:34,113,469-34,117,075 | + | C1H1g22195 | C2H1g02946 | LOC_Os01g66300 | Os01g0886300 | - | Detail |
| CX1g003847 | 1:34,119,790-34,121,861 | - | C1H1g24324 | C2H1g26611 | LOC_Os01g66320 | Os01g0886500 | - | Detail |
| CX1g001643 | 1:34,122,993-34,128,358 | - | C1H1g06569 | C2H1g25926 | LOC_Os01g66330 | Os01g0886600 | - | Detail |
| CX1g002780 | 1:34,136,403-34,140,949 | + | C1H1g09303 | C2H1g16527 | LOC_Os01g66350 | Os01g0886900 | - | Detail |
| CX1g001757 | 1:34,142,847-34,145,750 | + | C1H1g04514 | C2H1g22994 | LOC_Os01g66360 | Os01g0887100 | - | Detail |
| CX1g005333 | 1:34,146,321-34,151,069 | - | C1H1g16536 | C2H1g01577 | LOC_Os01g66379 | Os01g0887400 | - | Detail |
| CX1g003758 | 1:34,158,408-34,158,557 | - | - | - | - | Os01g0887550 | - | Detail |
| CX1g004709 | 1:34,160,194-34,165,051 | - | C1H1g11314 | C2H1g28074 | LOC_Os01g66420 | Os01g0887700 | - | Detail |
| CX1g007087 | 1:34,168,208-34,170,915 | + | C1H1g19688 | C2H1g23351 | LOC_Os01g66440 | - | - | Detail |
| CX1g000045 | 1:34,171,916-34,172,179 | - | C1H1g03558 | - | - | Os01g0888022 | - | Detail |
| CX1g001905 | 1:34,188,568-34,190,492 | + | C1H1g13104 | C2H1g28944 | LOC_Os01g66490 | Os01g0888300 | - | Detail |
| CX1g002416 | 1:34,196,510-34,200,848 | - | C1H1g03540 | C2H1g16784 | LOC_Os01g66500 | Os01g0888500 | - | Detail |
| CX1g004975 | 1:34,205,095-34,208,666 | + | C1H1g07656 | C2H1g08009 | LOC_Os01g66510 | Os01g0888600 | - | Detail |
| CX1g003196 | 1:34,209,258-34,212,540 | - | C1H1g05592 | C2H1g13613 | LOC_Os01g66520 | Os01g0888700 | - | Detail |