| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g07907 | 2:9,612,465-9,613,231 | + | C1H2g23683 | - | - | Os02g0284300 | - | Detail |
| C2H2g22092 | 2:9,626,818-9,631,529 | + | C1H2g11438 | CX2g024875 | LOC_Os02g18370 | Os02g0284500 | TAP | Detail |
| C2H2g21013 | 2:9,652,901-9,654,544 | - | C1H2g26314 | CX2g021748 | LOC_Os02g18410 | Os02g0285300 | - | Detail |
| C2H2g23832 | 2:9,663,153-9,665,054 | - | C1H2g07273 | CX2g023523 | LOC_Os02g18430 | Os02g0285700 | - | Detail |
| C2H2g26794 | 2:9,676,411-9,683,990 | + | C1H2g22840 | CX2g018876 | LOC_Os02g18450 | Os02g0285800 | - | Detail |
| C2H2g27610 | 2:9,684,291-9,685,883 | - | C1H2g00859 | CX2g018950 | LOC_Os02g18460 | Os02g0285900 | - | Detail |
| C2H2g12771 | 2:9,707,519-9,711,152 | + | C1H2g08140 | CX2g020301 | LOC_Os02g18480 | Os02g0286200 | - | Detail |
| C2H2g22028 | 2:9,719,609-9,722,527 | - | C1H2g24590 | CX2g022175 | LOC_Os02g18550 | Os02g0287000 | - | Detail |
| C2H2g22070 | 2:9,739,791-9,743,121 | - | C1H2g05642 | CX2g023220 | LOC_Os02g18650 | Os02g0288100 | - | Detail |
| C2H2g19177 | 2:9,746,414-9,750,644 | + | C1H2g19267 | CX2g018977 | LOC_Os02g18660 | Os02g0288200 | - | Detail |
| C2H2g26399 | 2:9,766,803-9,772,531 | - | C1H2g31274 | CX2g019572 | LOC_Os02g18670 | Os02g0288400 | - | Detail |
| C2H2g23610 | 2:9,783,672-9,786,230 | - | C1H2g21282 | CX2g024446 | LOC_Os02g18690 | Os02g0288600 | - | Detail |
| C2H2g11555 | 2:9,787,954-9,788,382 | - | C1H2g21282 | CX2g024446 | LOC_Os02g18690 | - | - | Detail |
| C2H2g06348 | 2:9,799,150-9,804,767 | - | C1H2g14772 | CX2g019572 | LOC_Os02g18670 | Os02g0288400 | - | Detail |
| C2H2g20798 | 2:9,810,678-9,814,495 | - | C1H2g20847 | CX2g024606 | LOC_Os02g21340 | Os02g0318450 | - | Detail |
| C2H2g01298 | 2:9,818,998-9,819,207 | - | - | - | - | - | - | Detail |
| C2H2g29157 | 2:9,839,789-9,848,134 | + | - | - | - | - | - | Detail |
| C2H2g27765 | 2:9,849,515-9,863,786 | - | C1H2g06145 | CX2g024827 | LOC_Os02g18820 | Os02g0290300 | SLG2 | Detail |
| C2H2g17529 | 2:9,867,729-9,870,543 | + | C1H2g17019 | CX2g024204 | LOC_Os02g18830 | Os02g0290400 | - | Detail |
| C2H2g30224 | 2:9,871,338-9,874,683 | - | C1H2g27720 | CX2g021037 | LOC_Os02g18840 | Os02g0290500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001863 | 1:33,935,523-33,937,288 | - | C1H1g12565 | C2H1g26075 | LOC_Os01g66010 | Os01g0882800 | OsAAP8 | Detail |
| CX1g000828 | 1:33,939,764-33,939,925 | + | - | - | - | - | - | Detail |
| CX1g003084 | 1:33,942,281-33,944,215 | + | C1H1g06649 | C2H1g14239 | LOC_Os01g66020 | Os01g0883000 | - | Detail |
| CX1g000214 | 1:33,944,881-33,946,963 | - | C1H1g27902 | C2H1g11503 | LOC_Os01g66030 | Os01g0883100 | OsMADS2 | Detail |
| CX1g004776 | 1:33,949,311-33,955,753 | + | C1H1g29165 | C2H1g08965 | LOC_Os01g66050 | Os01g0883200 | - | Detail |
| CX1g000593 | 1:33,959,845-33,968,027 | + | C1H1g17858 | C2H1g04719 | LOC_Os01g66070 | Os01g0883400 | - | Detail |
| CX1g004921 | 1:33,989,208-33,992,010 | + | C1H1g04579 | C2H1g18953 | LOC_Os01g66100 | Os01g0883800 | 20ox2, C20OX2, GA20, GA20ox-2, Os20ox2, OsGA20ox-2, OsGA20ox2, SD1, SD1-in, SD1-ja, Sd-1, d47, d49, sd-1, sd1, "sd1 (d47, sd1-d, sd1-1)", sd1-1, sd1-2, sd1-3, sd1-4 | Detail |
| CX1g004480 | 1:33,993,658-33,998,018 | - | C1H1g11499 | C2H1g12762 | LOC_Os01g66110 | Os01g0883900 | - | Detail |
| CX1g006945 | 1:34,007,437-34,009,092 | - | C1H1g00819 | C2H1g26289 | LOC_Os01g66120 | Os01g0884300 | OsNAC6 | Detail |
| CX1g000207 | 1:34,017,196-34,021,584 | + | C1H1g22008 | C2H1g15992 | LOC_Os01g66130 | Os01g0884400 | OsPUB16, OsPIE3 | Detail |
| CX1g001201 | 1:34,022,209-34,033,298 | - | C1H1g14405 | C2H1g16552 | LOC_Os01g66140 | Os01g0884500 | - | Detail |
| CX1g001119 | 1:34,035,411-34,037,759 | - | C1H1g17014 | C2H1g27234 | - | - | - | Detail |
| CX1g001844 | 1:34,042,450-34,044,296 | - | C1H1g08290 | C2H1g20664 | LOC_Os01g66150 | Os01g0884700 | - | Detail |
| CX1g005283 | 1:34,046,357-34,047,913 | + | C1H1g07105 | C2H1g19237 | LOC_Os01g66160 | Os01g0884800 | - | Detail |
| CX1g006373 | 1:34,048,153-34,051,176 | - | C1H1g15937 | C2H1g27259 | LOC_Os01g66170 | Os01g0884900 | - | Detail |
| CX1g005687 | 1:34,052,308-34,054,346 | + | C1H1g27873 | C2H1g17695 | LOC_Os01g66180 | Os01g0885000 | - | Detail |
| CX1g002386 | 1:34,056,894-34,058,087 | - | C1H1g01709 | - | LOC_Os01g66190 | Os01g0885200 | - | Detail |
| CX1g002733 | 1:34,062,193-34,065,439 | - | C1H1g19782 | C2H1g03917 | LOC_Os01g66200 | Os01g0885300 | - | Detail |
| CX1g006568 | 1:34,075,160-34,077,988 | - | C1H1g04510 | C2H1g15479 | LOC_Os01g66230 | Os01g0885500 | - | Detail |
| CX1g005515 | 1:34,078,588-34,082,522 | + | C1H1g01972 | C2H1g18513 | LOC_Os01g66240 | Os01g0885600 | - | Detail |