| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g00950 | 5:21,541,272-21,542,509 | + | C1H5g08677 | CX5g037606 | LOC_Os05g44170 | Os05g0517900 | - | Detail |
| C2H5g12138 | 5:21,543,665-21,544,469 | - | C1H5g28867 | CX5g039831 | LOC_Os05g44180 | Os05g0518000 | OsFTL10 | Detail |
| C2H5g05606 | 5:21,553,705-21,558,185 | + | C1H5g21350 | CX5g040142 | LOC_Os05g44190 | Os05g0518200 | - | Detail |
| C2H5g18484 | 5:21,559,670-21,561,645 | - | C1H5g09247 | CX5g037767 | LOC_Os05g44200 | Os05g0518300 | - | Detail |
| C2H5g13659 | 5:21,594,702-21,602,429 | + | C1H5g08772 | CX5g038489 | LOC_Os05g44210 | Os05g0518600 | OsTPS1 | Detail |
| C2H5g28427 | 5:21,611,673-21,612,074 | + | C1H5g24612 | CX5g040893 | LOC_Os05g44260 | Os05g0518800 | OsS40-2 | Detail |
| C2H5g28470 | 5:21,624,872-21,625,684 | + | C1H5g01128 | CX5g040062 | LOC_Os05g44270 | Os05g0519000 | - | Detail |
| C2H5g30115 | 5:21,635,439-21,639,564 | + | C1H5g07867 | CX5g038803 | LOC_Os05g44290 | Os05g0519200 | - | Detail |
| C2H5g03043 | 5:21,640,808-21,642,898 | - | C1H5g30314 | CX5g038305 | LOC_Os05g44300 | Os05g0519300 | OsDUF50606 | Detail |
| C2H5g21922 | 5:21,646,192-21,652,804 | - | C1H5g04824 | CX5g038313 | LOC_Os05g44310 | Os05g0519400 | - | Detail |
| C2H5g04929 | 5:21,653,179-21,657,675 | - | C1H5g25319 | CX5g039441 | LOC_Os05g44320 | Os05g0519500 | - | Detail |
| C2H5g22047 | 5:21,662,308-21,667,615 | + | C1H5g00452 | CX5g038744 | LOC_Os05g44330 | Os05g0519600 | - | Detail |
| C2H5g05695 | 5:21,667,985-21,671,634 | - | C1H5g17989 | CX5g037782 | LOC_Os05g44340 | Os05g0519700 | - | Detail |
| C2H5g00768 | 5:21,672,327-21,675,439 | + | C1H5g30392 | CX5g040719 | LOC_Os05g44350 | Os05g0519800 | - | Detail |
| C2H5g18682 | 5:21,675,907-21,681,749 | - | C1H5g16249 | CX5g037061 | LOC_Os05g44360 | Os05g0519900 | - | Detail |
| C2H5g28805 | 5:21,684,358-21,686,500 | - | C1H5g12015 | CX5g038893 | LOC_Os05g44380 | Os05g0520100 | - | Detail |
| C2H5g23024 | 5:21,688,469-21,690,441 | - | C1H5g13206 | CX5g039614 | LOC_Os05g44390 | Os05g0520200 | - | Detail |
| C2H5g29984 | 5:21,696,528-21,698,603 | + | C1H5g27133 | CX5g041084 | LOC_Os05g44400 | Os05g0520300 | - | Detail |
| C2H5g01469 | 5:21,709,557-21,710,541 | + | C1H5g30703 | CX5g037559 | LOC_Os05g44410 | Os05g0202600 | - | Detail |
| C2H5g12159 | 5:21,728,412-21,729,362 | + | C1H5g26951 | CX5g037160 | LOC_Os05g44420 | Os05g0520600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001863 | 1:33,935,523-33,937,288 | - | C1H1g12565 | C2H1g26075 | LOC_Os01g66010 | Os01g0882800 | OsAAP8 | Detail |
| CX1g000828 | 1:33,939,764-33,939,925 | + | - | - | - | - | - | Detail |
| CX1g003084 | 1:33,942,281-33,944,215 | + | C1H1g06649 | C2H1g14239 | LOC_Os01g66020 | Os01g0883000 | - | Detail |
| CX1g000214 | 1:33,944,881-33,946,963 | - | C1H1g27902 | C2H1g11503 | LOC_Os01g66030 | Os01g0883100 | OsMADS2 | Detail |
| CX1g004776 | 1:33,949,311-33,955,753 | + | C1H1g29165 | C2H1g08965 | LOC_Os01g66050 | Os01g0883200 | - | Detail |
| CX1g000593 | 1:33,959,845-33,968,027 | + | C1H1g17858 | C2H1g04719 | LOC_Os01g66070 | Os01g0883400 | - | Detail |
| CX1g004921 | 1:33,989,208-33,992,010 | + | C1H1g04579 | C2H1g18953 | LOC_Os01g66100 | Os01g0883800 | 20ox2, C20OX2, GA20, GA20ox-2, Os20ox2, OsGA20ox-2, OsGA20ox2, SD1, SD1-in, SD1-ja, Sd-1, d47, d49, sd-1, sd1, "sd1 (d47, sd1-d, sd1-1)", sd1-1, sd1-2, sd1-3, sd1-4 | Detail |
| CX1g004480 | 1:33,993,658-33,998,018 | - | C1H1g11499 | C2H1g12762 | LOC_Os01g66110 | Os01g0883900 | - | Detail |
| CX1g006945 | 1:34,007,437-34,009,092 | - | C1H1g00819 | C2H1g26289 | LOC_Os01g66120 | Os01g0884300 | OsNAC6 | Detail |
| CX1g000207 | 1:34,017,196-34,021,584 | + | C1H1g22008 | C2H1g15992 | LOC_Os01g66130 | Os01g0884400 | OsPUB16, OsPIE3 | Detail |
| CX1g001201 | 1:34,022,209-34,033,298 | - | C1H1g14405 | C2H1g16552 | LOC_Os01g66140 | Os01g0884500 | - | Detail |
| CX1g001119 | 1:34,035,411-34,037,759 | - | C1H1g17014 | C2H1g27234 | - | - | - | Detail |
| CX1g001844 | 1:34,042,450-34,044,296 | - | C1H1g08290 | C2H1g20664 | LOC_Os01g66150 | Os01g0884700 | - | Detail |
| CX1g005283 | 1:34,046,357-34,047,913 | + | C1H1g07105 | C2H1g19237 | LOC_Os01g66160 | Os01g0884800 | - | Detail |
| CX1g006373 | 1:34,048,153-34,051,176 | - | C1H1g15937 | C2H1g27259 | LOC_Os01g66170 | Os01g0884900 | - | Detail |
| CX1g005687 | 1:34,052,308-34,054,346 | + | C1H1g27873 | C2H1g17695 | LOC_Os01g66180 | Os01g0885000 | - | Detail |
| CX1g002386 | 1:34,056,894-34,058,087 | - | C1H1g01709 | - | LOC_Os01g66190 | Os01g0885200 | - | Detail |
| CX1g002733 | 1:34,062,193-34,065,439 | - | C1H1g19782 | C2H1g03917 | LOC_Os01g66200 | Os01g0885300 | - | Detail |
| CX1g006568 | 1:34,075,160-34,077,988 | - | C1H1g04510 | C2H1g15479 | LOC_Os01g66230 | Os01g0885500 | - | Detail |
| CX1g005515 | 1:34,078,588-34,082,522 | + | C1H1g01972 | C2H1g18513 | LOC_Os01g66240 | Os01g0885600 | - | Detail |