| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g12135 | 4:15,716,293-15,717,732 | + | C2H4g13161 | CX4g033855 | LOC_Os04g30750 | Os04g0376200 | - | Detail |
| C1H4g11616 | 4:15,719,731-15,724,399 | - | C2H4g28902 | CX4g034926 | LOC_Os04g30760 | Os04g0376300 | OsPLS4 | Detail |
| C1H4g04380 | 4:15,729,923-15,731,437 | - | C2H4g22640 | CX4g034222 | LOC_Os04g30770 | Os04g0376400 | - | Detail |
| C1H4g04365 | 4:15,738,903-15,743,317 | - | C2H4g16376 | CX4g036230 | LOC_Os04g30780 | Os04g0376500 | - | Detail |
| C1H4g01599 | 4:15,745,235-15,747,694 | - | C2H4g13123 | CX4g033110 | LOC_Os04g30790 | Os04g0376600 | - | Detail |
| C1H4g10257 | 4:15,751,901-15,755,187 | - | C2H4g22799 | CX11g013645 | LOC_Os04g30800 | Os04g0376700 | - | Detail |
| C1H4g19859 | 4:15,772,605-15,776,447 | + | C2H4g24581 | CX4g034805 | LOC_Os04g30880 | Os04g0377600 | - | Detail |
| C1H4g31829 | 4:15,777,330-15,781,663 | - | C2H4g01775 | - | - | - | - | Detail |
| C1H4g06621 | 4:15,784,774-15,789,597 | + | C2H4g24005 | CX4g034126 | LOC_Os04g30910 | Os04g0378200 | - | Detail |
| C1H4g07551 | 4:15,801,277-15,805,083 | + | C2H4g13399 | CX4g031629 | LOC_Os04g30930 | Os04g0378575 | - | Detail |
| C1H4g12695 | 4:15,828,886-15,838,820 | + | C2H4g06070 | CX4g033147 | LOC_Os04g31000 | Os04g0379300 | - | Detail |
| C1H4g10583 | 4:15,843,566-15,845,420 | - | C2H4g14670 | CX4g036303 | LOC_Os04g31010 | Os04g0379400 | - | Detail |
| C1H4g25398 | 4:15,846,813-15,850,977 | + | C2H4g17952 | CX4g033620 | LOC_Os04g31020 | - | - | Detail |
| C1H4g14850 | 4:15,857,314-15,858,811 | + | C2H4g21030 | CX4g036222 | LOC_Os04g31030 | Os04g0379600 | - | Detail |
| C1H4g24339 | 4:15,859,429-15,862,134 | - | C2H4g09470 | CX4g032400 | LOC_Os04g31040 | Os04g0379700 | OsVDE | Detail |
| C1H4g13382 | 4:15,864,675-15,869,263 | + | C2H4g26874 | CX4g033149 | LOC_Os04g31050 | Os04g0379800 | - | Detail |
| C1H4g26878 | 4:15,870,495-15,872,900 | - | C2H4g26825 | CX4g036511 | LOC_Os04g31070 | Os04g0379900 | - | Detail |
| C1H4g30575 | 4:15,902,606-15,904,937 | + | C2H4g19037 | CX4g035040 | LOC_Os04g31110 | Os04g0380200 | - | Detail |
| C1H4g22670 | 4:15,906,753-15,908,117 | - | C2H4g14356 | CX4g035366 | LOC_Os04g31120 | Os04g0380300 | - | Detail |
| C1H4g10860 | 4:15,934,724-15,937,828 | - | C2H4g11769 | CX4g033366 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001863 | 1:33,935,523-33,937,288 | - | C1H1g12565 | C2H1g26075 | LOC_Os01g66010 | Os01g0882800 | OsAAP8 | Detail |
| CX1g000828 | 1:33,939,764-33,939,925 | + | - | - | - | - | - | Detail |
| CX1g003084 | 1:33,942,281-33,944,215 | + | C1H1g06649 | C2H1g14239 | LOC_Os01g66020 | Os01g0883000 | - | Detail |
| CX1g000214 | 1:33,944,881-33,946,963 | - | C1H1g27902 | C2H1g11503 | LOC_Os01g66030 | Os01g0883100 | OsMADS2 | Detail |
| CX1g004776 | 1:33,949,311-33,955,753 | + | C1H1g29165 | C2H1g08965 | LOC_Os01g66050 | Os01g0883200 | - | Detail |
| CX1g000593 | 1:33,959,845-33,968,027 | + | C1H1g17858 | C2H1g04719 | LOC_Os01g66070 | Os01g0883400 | - | Detail |
| CX1g004921 | 1:33,989,208-33,992,010 | + | C1H1g04579 | C2H1g18953 | LOC_Os01g66100 | Os01g0883800 | 20ox2, C20OX2, GA20, GA20ox-2, Os20ox2, OsGA20ox-2, OsGA20ox2, SD1, SD1-in, SD1-ja, Sd-1, d47, d49, sd-1, sd1, "sd1 (d47, sd1-d, sd1-1)", sd1-1, sd1-2, sd1-3, sd1-4 | Detail |
| CX1g004480 | 1:33,993,658-33,998,018 | - | C1H1g11499 | C2H1g12762 | LOC_Os01g66110 | Os01g0883900 | - | Detail |
| CX1g006945 | 1:34,007,437-34,009,092 | - | C1H1g00819 | C2H1g26289 | LOC_Os01g66120 | Os01g0884300 | OsNAC6 | Detail |
| CX1g000207 | 1:34,017,196-34,021,584 | + | C1H1g22008 | C2H1g15992 | LOC_Os01g66130 | Os01g0884400 | OsPUB16, OsPIE3 | Detail |
| CX1g001201 | 1:34,022,209-34,033,298 | - | C1H1g14405 | C2H1g16552 | LOC_Os01g66140 | Os01g0884500 | - | Detail |
| CX1g001119 | 1:34,035,411-34,037,759 | - | C1H1g17014 | C2H1g27234 | - | - | - | Detail |
| CX1g001844 | 1:34,042,450-34,044,296 | - | C1H1g08290 | C2H1g20664 | LOC_Os01g66150 | Os01g0884700 | - | Detail |
| CX1g005283 | 1:34,046,357-34,047,913 | + | C1H1g07105 | C2H1g19237 | LOC_Os01g66160 | Os01g0884800 | - | Detail |
| CX1g006373 | 1:34,048,153-34,051,176 | - | C1H1g15937 | C2H1g27259 | LOC_Os01g66170 | Os01g0884900 | - | Detail |
| CX1g005687 | 1:34,052,308-34,054,346 | + | C1H1g27873 | C2H1g17695 | LOC_Os01g66180 | Os01g0885000 | - | Detail |
| CX1g002386 | 1:34,056,894-34,058,087 | - | C1H1g01709 | - | LOC_Os01g66190 | Os01g0885200 | - | Detail |
| CX1g002733 | 1:34,062,193-34,065,439 | - | C1H1g19782 | C2H1g03917 | LOC_Os01g66200 | Os01g0885300 | - | Detail |
| CX1g006568 | 1:34,075,160-34,077,988 | - | C1H1g04510 | C2H1g15479 | LOC_Os01g66230 | Os01g0885500 | - | Detail |
| CX1g005515 | 1:34,078,588-34,082,522 | + | C1H1g01972 | C2H1g18513 | LOC_Os01g66240 | Os01g0885600 | - | Detail |