| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g30250 | 2:24,535,812-24,539,946 | + | C2H2g29983 | CX2g019845 | LOC_Os02g43760 | Os02g0654500 | OsUCH3 | Detail |
| C1H2g07140 | 2:24,540,511-24,542,597 | - | C2H2g23814 | CX2g019074 | LOC_Os02g43770 | Os02g0654600 | - | Detail |
| C1H2g17661 | 2:24,548,631-24,549,217 | + | - | - | - | - | - | Detail |
| C1H2g15432 | 2:24,552,977-24,554,937 | + | C2H2g23602 | CX2g019925 | LOC_Os02g43810 | Os02g0655100 | - | Detail |
| C1H2g01941 | 2:24,563,756-24,564,802 | + | C2H2g05194 | CX2g022981 | LOC_Os02g43820 | Os02g0655200 | ERF95, OsERF#095, OsSta2 | Detail |
| C1H2g19564 | 2:24,575,172-24,576,014 | - | C2H2g06967 | CX2g023444 | LOC_Os02g43830 | Os02g0655300 | - | Detail |
| C1H2g25318 | 2:24,579,203-24,581,273 | + | C2H2g00346 | CX4g033458 | LOC_Os02g43840 | Os02g0655500 | - | Detail |
| C1H2g04583 | 2:24,584,169-24,588,208 | - | C2H2g05782 | CX2g022031 | LOC_Os02g43850 | Os02g0655600 | - | Detail |
| C1H2g12579 | 2:24,598,027-24,601,909 | + | C2H2g15593 | CX2g021119 | LOC_Os02g43860 | Os02g0655700 | - | Detail |
| C1H2g18315 | 2:24,603,770-24,604,216 | - | C2H2g04524 | CX2g020362 | LOC_Os02g43865 | Os02g0655750 | - | Detail |
| C1H2g03124 | 2:24,604,660-24,607,943 | - | C2H2g17063 | CX2g023774 | LOC_Os02g43870 | Os02g0655800 | - | Detail |
| C1H2g01085 | 2:24,611,589-24,611,895 | - | C2H2g08805 | - | - | - | - | Detail |
| C1H2g19219 | 2:24,611,902-24,612,855 | - | C2H2g21079 | CX2g021832 | LOC_Os02g43900 | Os02g0656100 | - | Detail |
| C1H2g14804 | 2:24,614,711-24,625,744 | - | C2H2g20194 | CX2g022474 | LOC_Os02g43906 | Os02g0656200 | - | Detail |
| C1H2g27732 | 2:24,621,707-24,626,012 | + | C2H2g16183 | CX2g024885 | LOC_Os02g43920 | Os02g0656300 | - | Detail |
| C1H2g03674 | 2:24,630,203-24,634,153 | + | C2H2g03356 | CX2g020033 | LOC_Os02g43930 | Os02g0656500 | - | Detail |
| C1H2g25776 | 2:24,675,028-24,677,899 | - | C2H2g24603 | CX2g019542 | LOC_Os02g44010 | Os02g0657700 | - | Detail |
| C1H2g22036 | 2:24,682,286-24,686,319 | + | C2H2g19825 | - | - | - | - | Detail |
| C1H2g03030 | 2:24,689,366-24,690,987 | - | C2H2g25514 | CX2g023520 | LOC_Os02g44040 | Os02g0658000 | - | Detail |
| C1H2g22002 | 2:24,692,432-24,693,362 | - | C2H2g13342 | CX2g020097 | LOC_Os02g44080 | Os02g0658100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001863 | 1:33,935,523-33,937,288 | - | C1H1g12565 | C2H1g26075 | LOC_Os01g66010 | Os01g0882800 | OsAAP8 | Detail |
| CX1g000828 | 1:33,939,764-33,939,925 | + | - | - | - | - | - | Detail |
| CX1g003084 | 1:33,942,281-33,944,215 | + | C1H1g06649 | C2H1g14239 | LOC_Os01g66020 | Os01g0883000 | - | Detail |
| CX1g000214 | 1:33,944,881-33,946,963 | - | C1H1g27902 | C2H1g11503 | LOC_Os01g66030 | Os01g0883100 | OsMADS2 | Detail |
| CX1g004776 | 1:33,949,311-33,955,753 | + | C1H1g29165 | C2H1g08965 | LOC_Os01g66050 | Os01g0883200 | - | Detail |
| CX1g000593 | 1:33,959,845-33,968,027 | + | C1H1g17858 | C2H1g04719 | LOC_Os01g66070 | Os01g0883400 | - | Detail |
| CX1g004921 | 1:33,989,208-33,992,010 | + | C1H1g04579 | C2H1g18953 | LOC_Os01g66100 | Os01g0883800 | 20ox2, C20OX2, GA20, GA20ox-2, Os20ox2, OsGA20ox-2, OsGA20ox2, SD1, SD1-in, SD1-ja, Sd-1, d47, d49, sd-1, sd1, "sd1 (d47, sd1-d, sd1-1)", sd1-1, sd1-2, sd1-3, sd1-4 | Detail |
| CX1g004480 | 1:33,993,658-33,998,018 | - | C1H1g11499 | C2H1g12762 | LOC_Os01g66110 | Os01g0883900 | - | Detail |
| CX1g006945 | 1:34,007,437-34,009,092 | - | C1H1g00819 | C2H1g26289 | LOC_Os01g66120 | Os01g0884300 | OsNAC6 | Detail |
| CX1g000207 | 1:34,017,196-34,021,584 | + | C1H1g22008 | C2H1g15992 | LOC_Os01g66130 | Os01g0884400 | OsPUB16, OsPIE3 | Detail |
| CX1g001201 | 1:34,022,209-34,033,298 | - | C1H1g14405 | C2H1g16552 | LOC_Os01g66140 | Os01g0884500 | - | Detail |
| CX1g001119 | 1:34,035,411-34,037,759 | - | C1H1g17014 | C2H1g27234 | - | - | - | Detail |
| CX1g001844 | 1:34,042,450-34,044,296 | - | C1H1g08290 | C2H1g20664 | LOC_Os01g66150 | Os01g0884700 | - | Detail |
| CX1g005283 | 1:34,046,357-34,047,913 | + | C1H1g07105 | C2H1g19237 | LOC_Os01g66160 | Os01g0884800 | - | Detail |
| CX1g006373 | 1:34,048,153-34,051,176 | - | C1H1g15937 | C2H1g27259 | LOC_Os01g66170 | Os01g0884900 | - | Detail |
| CX1g005687 | 1:34,052,308-34,054,346 | + | C1H1g27873 | C2H1g17695 | LOC_Os01g66180 | Os01g0885000 | - | Detail |
| CX1g002386 | 1:34,056,894-34,058,087 | - | C1H1g01709 | - | LOC_Os01g66190 | Os01g0885200 | - | Detail |
| CX1g002733 | 1:34,062,193-34,065,439 | - | C1H1g19782 | C2H1g03917 | LOC_Os01g66200 | Os01g0885300 | - | Detail |
| CX1g006568 | 1:34,075,160-34,077,988 | - | C1H1g04510 | C2H1g15479 | LOC_Os01g66230 | Os01g0885500 | - | Detail |
| CX1g005515 | 1:34,078,588-34,082,522 | + | C1H1g01972 | C2H1g18513 | LOC_Os01g66240 | Os01g0885600 | - | Detail |