| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g23844 | 5:860,604-861,531 | + | C1H5g04400 | CX5g039032 | LOC_Os05g02730 | Os05g0118700 | LSY1, OsWOX3 | Detail |
| C2H5g12416 | 5:879,289-881,285 | + | - | CX5g039138 | LOC_Os05g02740 | Os05g0118800 | - | Detail |
| C2H5g07908 | 5:890,481-891,241 | - | C1H5g07583 | CX5g037492 | LOC_Os05g02770 | Os05g0119200 | OsGPRP3 | Detail |
| C2H5g12083 | 5:893,287-895,434 | - | C1H5g14848 | CX5g036862 | LOC_Os05g02780 | - | - | Detail |
| C2H5g19310 | 5:895,991-900,450 | + | C1H5g27829 | - | - | Os05g0119350 | - | Detail |
| C2H5g27633 | 5:896,625-900,818 | - | C1H5g12144 | CX5g038855 | LOC_Os05g02790 | Os05g0119400 | - | Detail |
| C2H5g28586 | 5:902,862-904,767 | + | C1H5g31502 | CX5g039714 | LOC_Os05g02810 | Os05g0119600 | - | Detail |
| C2H5g20475 | 5:906,134-910,098 | - | C1H5g05932 | CX5g039871 | LOC_Os05g02820 | Os05g0119700 | - | Detail |
| C2H5g16207 | 5:914,588-915,130 | + | - | CX5g040523 | - | - | - | Detail |
| C2H5g27318 | 5:924,283-926,397 | - | C1H5g25594 | CX5g040974 | LOC_Os05g02880 | Os05g0120100 | - | Detail |
| C2H5g09848 | 5:958,894-964,680 | + | C1H5g31585 | CX5g037865 | LOC_Os05g02940 | Os05g0120700 | - | Detail |
| C2H5g03610 | 5:968,282-969,866 | + | C1H5g20255 | CX5g040092 | LOC_Os05g02970 | Os05g0120800 | - | Detail |
| C2H5g24004 | 5:980,610-982,014 | + | C1H5g25679 | CX5g038448 | LOC_Os05g02990 | Os05g0121000 | - | Detail |
| C2H5g03745 | 5:983,992-993,664 | + | C1H5g01702 | CX5g038251 | - | Os05g0121100 | - | Detail |
| C2H5g13518 | 5:995,632-999,842 | - | C1H5g21915 | CX5g038381 | LOC_Os05g03000 | Os05g0121200 | - | Detail |
| C2H5g27724 | 5:1,001,134-1,006,398 | + | C1H5g23502 | CX5g037956 | LOC_Os05g03020 | Os05g0121400 | - | Detail |
| C2H5g29033 | 5:1,014,404-1,018,718 | - | C1H5g18884 | CX5g038220 | LOC_Os05g03040 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| C2H5g03539 | 5:1,049,068-1,053,189 | - | C1H5g22491 | CX5g039481 | LOC_Os05g03050 | Os05g0121700 | - | Detail |
| C2H5g07687 | 5:1,059,397-1,063,439 | + | C1H5g25689 | CX5g038840 | LOC_Os05g03060 | Os05g0121800 | - | Detail |
| C2H5g05750 | 5:1,063,498-1,065,255 | - | C1H5g18041 | CX5g041093 | LOC_Os05g03070 | Os05g0121900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001626 | 1:33,807,020-33,809,469 | - | C1H1g27446 | C2H1g14458 | LOC_Os01g65730 | Os01g0879500 | - | Detail |
| CX1g006046 | 1:33,813,435-33,815,495 | + | C1H1g18600 | C2H1g09705 | LOC_Os01g65740 | Os01g0879600 | - | Detail |
| CX1g002139 | 1:33,837,808-33,842,032 | + | C1H1g25092 | C2H1g22339 | LOC_Os01g65780 | Os01g0880200 | - | Detail |
| CX1g002644 | 1:33,847,300-33,850,556 | - | C1H1g20354 | C2H1g26105 | LOC_Os01g65790 | Os01g0880300 | - | Detail |
| CX1g004875 | 1:33,853,937-33,856,102 | - | C1H1g04264 | C2H1g17822 | LOC_Os01g65800 | Os01g0880400 | - | Detail |
| CX1g001455 | 1:33,857,414-33,858,007 | - | - | - | - | - | - | Detail |
| CX1g003781 | 1:33,862,448-33,863,542 | + | C1H1g01792 | C2H1g29982 | LOC_Os01g65830 | Os01g0880800 | - | Detail |
| CX1g001321 | 1:33,864,605-33,866,251 | - | C1H1g17934 | C2H1g06200 | LOC_Os01g65840 | Os01g0880900 | - | Detail |
| CX1g006572 | 1:33,866,704-33,875,152 | - | C1H1g23013 | C2H1g11118 | LOC_Os01g65850 | Os01g0881000 | - | Detail |
| CX1g004581 | 1:33,876,700-33,878,253 | - | C1H1g25389 | C2H1g12436 | LOC_Os01g65860 | Os01g0881100 | - | Detail |
| CX1g005624 | 1:33,880,088-33,881,029 | - | - | - | - | - | - | Detail |
| CX1g005363 | 1:33,893,752-33,897,974 | + | C1H1g04016 | C2H1g12086 | LOC_Os01g65880 | Os01g0881300 | - | Detail |
| CX1g003286 | 1:33,898,577-33,902,020 | + | C1H1g23337 | C2H1g15181 | LOC_Os01g65890 | Os01g0881400 | - | Detail |
| CX1g004270 | 1:33,902,138-33,902,353 | - | - | - | - | - | - | Detail |
| CX1g002063 | 1:33,902,949-33,904,858 | - | C1H1g30922 | C2H1g03014 | LOC_Os01g65900 | Os01g0881500 | - | Detail |
| CX1g004823 | 1:33,910,587-33,912,520 | - | C1H1g06237 | C2H1g06093 | LOC_Os01g65920 | Os01g0881900 | - | Detail |
| CX1g002714 | 1:33,923,099-33,924,098 | + | C1H1g26227 | C2H1g18577 | LOC_Os01g65950 | Os01g0882100 | - | Detail |
| CX1g003062 | 1:33,926,392-33,930,921 | + | C1H1g03465 | C2H1g05908 | LOC_Os01g65986 | Os01g0882300 | - | Detail |
| CX1g004350 | 1:33,931,525-33,932,199 | + | C1H1g03465 | C2H1g05908 | LOC_Os01g65992 | Os01g0882400 | - | Detail |
| CX1g004839 | 1:33,932,421-33,933,374 | - | C1H1g00623 | C2H1g09811 | LOC_Os01g66000 | Os01g0882500 | - | Detail |