| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g19073 | 9:15,635,940-15,636,245 | - | C1H9g13405 | CX9g055841 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C2H9g18629 | 9:15,645,202-15,646,614 | - | C1H9g23005 | CX9g057859 | LOC_Os09g30510 | Os09g0482860 | - | Detail |
| C2H9g07652 | 9:15,652,256-15,652,732 | - | C1H9g23005 | CX9g057859 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C2H9g29260 | 9:15,652,813-15,653,379 | - | C1H9g23005 | CX9g057859 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C2H9g17054 | 9:15,660,942-15,661,916 | + | - | - | - | - | - | Detail |
| C2H9g17845 | 9:15,666,891-15,667,313 | + | C1H9g13668 | CX9g057607 | LOC_Os09g31025 | Os09g0483300 | - | Detail |
| C2H9g03683 | 9:15,669,227-15,669,756 | + | - | - | - | - | - | Detail |
| C2H9g03838 | 9:15,671,286-15,673,112 | - | C1H9g12952 | CX9g057792 | LOC_Os09g31050 | Os09g0483600 | - | Detail |
| C2H9g25938 | 9:15,688,650-15,695,073 | - | C1H9g10463 | CX9g055724 | LOC_Os09g31090 | Os09g0484300 | - | Detail |
| C2H9g09529 | 9:15,714,246-15,716,121 | + | C1H9g25716 | CX9g056137 | LOC_Os09g31120 | Os09g0484800 | - | Detail |
| C2H9g06729 | 9:15,723,060-15,725,638 | + | C1H9g21552 | CX9g055844 | LOC_Os09g31130 | Os09g0484900 | - | Detail |
| C2H9g05554 | 9:15,744,629-15,749,440 | + | C1H9g28280 | CX9g057232 | LOC_Os09g31140 | Os09g0485600 | - | Detail |
| C2H9g12865 | 9:15,757,978-15,759,283 | + | C1H9g16686 | CX9g057421 | LOC_Os09g31170 | Os09g0485800 | - | Detail |
| C2H9g08271 | 9:15,759,761-15,761,485 | - | C1H9g09571 | CX9g056446 | LOC_Os09g31180 | Os09g0485900 | - | Detail |
| C2H9g29447 | 9:15,761,838-15,762,480 | - | - | CX9g057305 | - | Os09g0485950 | - | Detail |
| C2H9g15653 | 9:15,761,911-15,762,471 | + | C1H9g07652 | - | LOC_Os09g31190 | Os09g0486000 | - | Detail |
| C2H9g10052 | 9:15,766,622-15,767,116 | + | C1H9g10100 | CX9g058060 | LOC_Os09g31200 | Os09g0486500 | SAP1, Osi-SAP1, ISAP1, OsiSAP1, OSISAP1, OsSAP1 | Detail |
| C2H9g09908 | 9:15,775,628-15,777,004 | + | C1H9g04466 | CX9g056228 | LOC_Os09g31210 | Os09g0486700 | OsAGC18 | Detail |
| C2H9g21283 | 9:15,784,041-15,784,806 | + | - | - | - | - | - | Detail |
| C2H9g06324 | 9:15,785,151-15,790,314 | - | C1H9g26143 | CX9g057251 | LOC_Os09g31230 | Os09g0487200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002038 | 1:33,543,503-33,545,686 | + | C1H1g02581 | C2H1g08988 | LOC_Os01g65310 | Os01g0873700 | - | Detail |
| CX1g005957 | 1:33,546,679-33,553,065 | - | C1H1g07269 | C2H1g14444 | LOC_Os01g65320 | Os01g0873800 | - | Detail |
| CX1g003528 | 1:33,554,656-33,561,592 | - | C1H1g13757 | C2H1g05655 | LOC_Os01g65330 | Os01g0873900 | - | Detail |
| CX1g003166 | 1:33,569,522-33,573,248 | - | C1H1g26896 | C2H1g01794 | LOC_Os01g65350 | Os01g0874100 | OsdNK2 | Detail |
| CX1g000187 | 1:33,578,831-33,579,154 | + | - | - | - | - | - | Detail |
| CX1g005567 | 1:33,579,787-33,580,080 | - | - | - | - | - | - | Detail |
| CX1g006020 | 1:33,588,620-33,588,868 | + | - | - | - | Os01g0822501 | - | Detail |
| CX1g001179 | 1:33,589,789-33,590,737 | + | C1H1g24290 | C2H1g23370 | LOC_Os01g65370 | Os01g0874300 | MYB22 | Detail |
| CX1g003478 | 1:33,591,702-33,592,358 | + | C1H7g13200 | C2H1g23370 | - | - | - | Detail |
| CX1g006315 | 1:33,608,147-33,610,613 | + | C1H1g11453 | C2H1g22166 | LOC_Os01g65380 | Os01g0874700 | - | Detail |
| CX1g006909 | 1:33,616,529-33,618,145 | - | C1H1g12487 | C2H1g23932 | LOC_Os01g65400 | Os01g0874800 | - | Detail |
| CX1g000339 | 1:33,622,086-33,625,762 | + | C1H1g05548 | C2H1g14352 | LOC_Os01g65410 | Os01g0874900 | OsCADT1, LCRP, SHMT4 | Detail |
| CX1g000853 | 1:33,628,551-33,629,669 | - | C1H1g31376 | C2H1g27444 | LOC_Os01g65420 | Os01g0875000 | - | Detail |
| CX1g001730 | 1:33,642,393-33,644,639 | + | C1H1g11118 | C2H1g15980 | LOC_Os01g65440 | Os01g0875300 | - | Detail |
| CX1g002428 | 1:33,646,293-33,650,770 | - | C1H1g24481 | C2H1g28268 | LOC_Os01g65450 | Os01g0875400 | - | Detail |
| CX1g000719 | 1:33,654,034-33,660,537 | + | C1H1g11688 | C2H1g06632 | LOC_Os01g65460 | Os01g0875500 | - | Detail |
| CX1g004689 | 1:33,668,953-33,671,066 | + | C1H1g04147 | C2H1g04754 | LOC_Os01g65480 | Os01g0875700 | - | Detail |
| CX1g003607 | 1:33,672,253-33,673,507 | - | C1H1g31658 | C2H1g28608 | LOC_Os01g65490 | Os01g0875800 | - | Detail |
| CX1g007138 | 1:33,677,190-33,681,212 | + | C1H1g10887 | C2H1g12912 | LOC_Os01g65500 | Os01g0876100 | OsCLC1 | Detail |
| CX1g002720 | 1:33,682,594-33,683,757 | + | - | - | - | - | - | Detail |