| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g18264 | 2:22,785,429-22,788,083 | + | C2H2g20688 | CX2g024892 | LOC_Os02g40130 | Os02g0614966 | - | Detail |
| C1H2g30063 | 2:22,792,176-22,795,547 | + | C2H2g24104 | CX2g019718 | LOC_Os02g40180 | Os02g0615400 | - | Detail |
| C1H2g00311 | 2:22,809,258-22,809,955 | + | C2H10g03172 | - | - | - | - | Detail |
| C1H2g05371 | 2:22,812,589-22,816,778 | + | C2H2g27798 | CX2g023917 | LOC_Os02g40240 | Os02g0615800 | - | Detail |
| C1H2g28443 | 2:22,851,233-22,853,939 | - | - | - | - | - | - | Detail |
| C1H2g02395 | 2:22,891,925-22,893,245 | - | C2H2g08455 | CX2g020249 | LOC_Os02g40270 | Os02g0616199 | - | Detail |
| C1H2g19871 | 2:22,905,314-22,911,195 | - | C2H2g09185 | CX2g022448 | LOC_Os02g40410 | Os02g0617100 | - | Detail |
| C1H2g09487 | 2:22,917,792-22,922,311 | - | C2H2g01683 | - | LOC_Os02g40420 | - | - | Detail |
| C1H2g18153 | 2:22,923,517-22,936,773 | - | C2H2g12073 | CX2g019193 | LOC_Os02g40430 | Os02g0617300 | - | Detail |
| C1H2g29661 | 2:22,948,386-22,949,915 | + | C2H2g17921 | CX2g022735 | LOC_Os02g40440 | Os02g0617400 | - | Detail |
| C1H2g22026 | 2:22,950,572-22,959,121 | + | C2H2g21511 | CX2g022878 | LOC_Os02g40450 | Os02g0617500 | MER3, OsMER3 | Detail |
| C1H2g23006 | 2:22,959,190-22,962,842 | - | C2H2g09254 | CX2g020956 | LOC_Os02g40454 | Os02g0617600 | - | Detail |
| C1H2g02429 | 2:22,963,406-22,971,975 | - | C2H2g18815 | CX2g019377 | LOC_Os02g40460 | Os02g0617700 | - | Detail |
| C1H2g02028 | 2:22,988,335-22,988,934 | - | - | - | LOC_Os02g53020 | - | - | Detail |
| C1H2g22582 | 2:22,992,141-22,994,350 | + | C2H2g26929 | - | LOC_Os02g40490 | - | - | Detail |
| C1H2g02238 | 2:22,998,546-23,000,240 | + | C2H2g04756 | CX2g024840 | LOC_Os02g40500 | Os02g0618100 | OsGRX9, OsGrx_C2.1 | Detail |
| C1H2g04978 | 2:23,001,507-23,005,434 | + | C2H2g05107 | CX2g024264 | LOC_Os02g40510 | Os02g0618200 | OsPRR1, OsTOC1, OsPRR1/OsTOC1 | Detail |
| C1H2g16546 | 2:23,005,880-23,007,215 | - | C2H2g25708 | - | LOC_Os02g40514 | Os02g0618250 | - | Detail |
| C1H2g01139 | 2:23,012,056-23,013,639 | - | C2H2g01262 | CX2g019264 | LOC_Os02g40530 | Os02g0618400 | OsMPS | Detail |
| C1H2g19268 | 2:23,028,666-23,030,167 | + | C2H2g01838 | CX2g024894 | LOC_Os02g40550 | Os02g0618700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002038 | 1:33,543,503-33,545,686 | + | C1H1g02581 | C2H1g08988 | LOC_Os01g65310 | Os01g0873700 | - | Detail |
| CX1g005957 | 1:33,546,679-33,553,065 | - | C1H1g07269 | C2H1g14444 | LOC_Os01g65320 | Os01g0873800 | - | Detail |
| CX1g003528 | 1:33,554,656-33,561,592 | - | C1H1g13757 | C2H1g05655 | LOC_Os01g65330 | Os01g0873900 | - | Detail |
| CX1g003166 | 1:33,569,522-33,573,248 | - | C1H1g26896 | C2H1g01794 | LOC_Os01g65350 | Os01g0874100 | OsdNK2 | Detail |
| CX1g000187 | 1:33,578,831-33,579,154 | + | - | - | - | - | - | Detail |
| CX1g005567 | 1:33,579,787-33,580,080 | - | - | - | - | - | - | Detail |
| CX1g006020 | 1:33,588,620-33,588,868 | + | - | - | - | Os01g0822501 | - | Detail |
| CX1g001179 | 1:33,589,789-33,590,737 | + | C1H1g24290 | C2H1g23370 | LOC_Os01g65370 | Os01g0874300 | MYB22 | Detail |
| CX1g003478 | 1:33,591,702-33,592,358 | + | C1H7g13200 | C2H1g23370 | - | - | - | Detail |
| CX1g006315 | 1:33,608,147-33,610,613 | + | C1H1g11453 | C2H1g22166 | LOC_Os01g65380 | Os01g0874700 | - | Detail |
| CX1g006909 | 1:33,616,529-33,618,145 | - | C1H1g12487 | C2H1g23932 | LOC_Os01g65400 | Os01g0874800 | - | Detail |
| CX1g000339 | 1:33,622,086-33,625,762 | + | C1H1g05548 | C2H1g14352 | LOC_Os01g65410 | Os01g0874900 | OsCADT1, LCRP, SHMT4 | Detail |
| CX1g000853 | 1:33,628,551-33,629,669 | - | C1H1g31376 | C2H1g27444 | LOC_Os01g65420 | Os01g0875000 | - | Detail |
| CX1g001730 | 1:33,642,393-33,644,639 | + | C1H1g11118 | C2H1g15980 | LOC_Os01g65440 | Os01g0875300 | - | Detail |
| CX1g002428 | 1:33,646,293-33,650,770 | - | C1H1g24481 | C2H1g28268 | LOC_Os01g65450 | Os01g0875400 | - | Detail |
| CX1g000719 | 1:33,654,034-33,660,537 | + | C1H1g11688 | C2H1g06632 | LOC_Os01g65460 | Os01g0875500 | - | Detail |
| CX1g004689 | 1:33,668,953-33,671,066 | + | C1H1g04147 | C2H1g04754 | LOC_Os01g65480 | Os01g0875700 | - | Detail |
| CX1g003607 | 1:33,672,253-33,673,507 | - | C1H1g31658 | C2H1g28608 | LOC_Os01g65490 | Os01g0875800 | - | Detail |
| CX1g007138 | 1:33,677,190-33,681,212 | + | C1H1g10887 | C2H1g12912 | LOC_Os01g65500 | Os01g0876100 | OsCLC1 | Detail |
| CX1g002720 | 1:33,682,594-33,683,757 | + | - | - | - | - | - | Detail |