| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19937 | 4:5,291,901-5,292,961 | + | C2H4g08911 | CX4g035259 | LOC_Os04g11970 | Os04g0196200 | OsASMT2 | Detail |
| C1H4g07183 | 4:5,314,463-5,317,161 | - | C2H4g17260 | CX4g034245 | LOC_Os04g12010 | Os04g0196600 | - | Detail |
| C1H4g18138 | 4:5,360,316-5,361,260 | + | C2H4g18642 | - | LOC_Os04g12060 | Os04g0197100 | - | Detail |
| C1H4g08988 | 4:5,365,722-5,370,854 | + | C2H4g00649 | CX4g035840 | LOC_Os04g12080 | Os04g0197200 | - | Detail |
| C1H4g25771 | 4:5,383,678-5,385,078 | - | C2H4g18722 | CX4g031765 | - | Os04g0197500 | - | Detail |
| C1H4g21757 | 4:5,393,908-5,398,869 | - | C2H4g14359 | CX1g000225 | - | Os04g0226400 | - | Detail |
| C1H4g22550 | 4:5,400,219-5,400,623 | + | - | - | - | - | - | Detail |
| C1H4g27102 | 4:5,441,945-5,450,377 | + | C2H4g15606 | CX4g035107 | LOC_Os04g12140 | Os04g0198733 | - | Detail |
| C1H4g06363 | 4:5,465,567-5,467,925 | - | - | - | - | - | - | Detail |
| C1H4g17776 | 4:5,469,221-5,470,399 | + | C2H4g26263 | CX4g032660 | - | Os04g0195100 | - | Detail |
| C1H4g14073 | 4:5,504,041-5,505,003 | + | C2H4g26263 | CX4g032660 | - | Os04g0195100 | - | Detail |
| C1H4g12642 | 4:5,563,624-5,567,254 | + | C2H4g11156 | CX4g034543 | - | Os09g0124200 | - | Detail |
| C1H4g15169 | 4:5,636,019-5,638,800 | - | C2H4g14785 | CX4g034359 | LOC_Os04g12390 | Os04g0200400 | - | Detail |
| C1H4g14978 | 4:5,644,403-5,645,228 | - | C2H4g14785 | CX4g034359 | LOC_Os04g12390 | Os04g0200400 | - | Detail |
| C1H4g16267 | 4:5,768,059-5,771,751 | - | C2H4g18135 | CX4g031446 | LOC_Os04g12460 | Os04g0201000 | - | Detail |
| C1H4g16105 | 4:5,789,191-5,795,814 | - | C2H4g10504 | CX4g034375 | LOC_Os04g12480 | Os04g0201200 | - | Detail |
| C1H4g17374 | 4:5,823,492-5,834,769 | - | C2H4g26946 | CX4g033852 | LOC_Os04g12530 | Os04g0201500 | OsAAT30 | Detail |
| C1H4g14971 | 4:5,847,100-5,850,704 | - | C2H4g03852 | CX4g034779 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| C1H4g07233 | 4:5,851,032-5,851,822 | + | - | - | - | - | - | Detail |
| C1H4g17048 | 4:5,863,850-5,866,285 | - | C2H4g12193 | CX4g034921 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001484 | 1:33,364,096-33,368,735 | + | C1H1g27512 | C2H1g12820 | LOC_Os01g64970 | Os01g0869900 | SAPK4, OsSAPK4 | Detail |
| CX1g002784 | 1:33,369,700-33,374,674 | - | C1H1g13667 | C2H1g15095 | LOC_Os01g64980 | Os01g0870100 | - | Detail |
| CX1g005868 | 1:33,376,637-33,377,274 | + | - | - | - | - | - | Detail |
| CX1g005766 | 1:33,377,933-33,382,091 | + | C1H1g03643 | C2H1g13430 | LOC_Os01g64990 | Os01g0870201 | - | Detail |
| CX1g004934 | 1:33,383,233-33,384,599 | + | C1H1g25940 | C2H1g08641 | LOC_Os01g64990 | Os01g0870300 | OsAMT3;1 | Detail |
| CX1g001460 | 1:33,391,515-33,394,609 | + | C1H1g14637 | C2H1g07832 | LOC_Os01g65000 | Os01g0831300 | - | Detail |
| CX1g006514 | 1:33,395,596-33,403,336 | - | C1H1g07139 | C2H1g11379 | LOC_Os01g65010 | Os01g0870400 | SDRLK-16 | Detail |
| CX1g001391 | 1:33,414,575-33,417,355 | - | C1H1g27684 | C2H1g08106 | LOC_Os01g65030 | Os01g0870500 | - | Detail |
| CX1g004252 | 1:33,428,327-33,430,453 | + | C1H1g16493 | C2H1g11379 | LOC_Os01g65060 | Os01g0871000 | SDRLK-70 | Detail |
| CX1g002432 | 1:33,432,071-33,438,578 | + | C1H1g29415 | C2H1g28915 | LOC_Os01g65070 | Os01g0871100 | - | Detail |
| CX1g002794 | 1:33,445,709-33,446,923 | + | C1H1g07095 | C2H1g16877 | LOC_Os01g65080 | Os01g0871200 | - | Detail |
| CX1g005777 | 1:33,447,924-33,451,012 | + | C1H1g03641 | C2H1g00963 | LOC_Os01g65090 | Os01g0871300 | - | Detail |
| CX1g000514 | 1:33,451,881-33,453,771 | - | C1H1g20493 | C2H1g24816 | LOC_Os01g65094 | Os01g0871350 | - | Detail |
| CX1g003681 | 1:33,456,942-33,457,133 | - | - | - | - | Os01g0871400 | - | Detail |
| CX1g000896 | 1:33,498,164-33,508,022 | + | C1H1g07629 | C2H1g29025 | LOC_Os01g65200 | Os01g0872600 | - | Detail |
| CX1g005372 | 1:33,509,407-33,511,415 | + | C1H1g09821 | C2H1g20570 | LOC_Os01g65210 | - | - | Detail |
| CX1g004185 | 1:33,513,119-33,520,380 | - | C1H1g00390 | C2H1g01785 | LOC_Os01g65220 | Os01g0872700 | - | Detail |
| CX1g005034 | 1:33,521,485-33,524,857 | - | C1H1g04115 | C2H1g08678 | LOC_Os01g65230 | Os01g0872800 | - | Detail |
| CX1g000711 | 1:33,527,666-33,527,830 | + | - | - | - | - | - | Detail |
| CX1g000705 | 1:33,530,203-33,531,840 | - | C1H1g24921 | - | LOC_Os01g65260 | Os01g0873100 | - | Detail |