| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g10431 | 2:5,983,556-5,987,268 | - | C1H2g20950 | CX2g024892 | LOC_Os02g12420 | Os02g0215700 | - | Detail |
| C2H2g09480 | 2:5,984,322-5,986,246 | + | - | - | - | - | - | Detail |
| C2H2g07772 | 2:5,986,592-5,987,909 | + | - | - | - | - | - | Detail |
| C2H2g02434 | 2:5,992,722-5,996,713 | + | C1H2g30669 | CX2g021303 | LOC_Os02g12440 | Os02g0215900 | OsGIRL1 | Detail |
| C2H2g25097 | 2:5,998,084-6,001,817 | + | C1H2g31159 | CX2g020152 | LOC_Os02g12450 | Os02g0216000 | - | Detail |
| C2H2g25657 | 2:6,020,080-6,020,384 | + | C1H2g21017 | CX2g021453 | LOC_Os02g12530 | Os02g0217400 | - | Detail |
| C2H2g02696 | 2:6,027,884-6,029,877 | + | C1H2g11667 | CX2g023027 | LOC_Os02g12540 | Os02g0217400 | - | Detail |
| C2H2g14429 | 2:6,031,423-6,033,403 | + | C1H2g21017 | CX2g021453 | LOC_Os02g12550 | Os02g0217400 | - | Detail |
| C2H2g26935 | 2:6,038,963-6,039,433 | - | C1H2g30831 | CX2g023330 | LOC_Os02g12560 | Os02g0216300 | - | Detail |
| C2H2g30519 | 2:6,039,941-6,040,355 | - | C1H5g15170 | CX5g039522 | - | - | - | Detail |
| C2H2g29582 | 2:6,041,757-6,045,670 | + | C1H2g13963 | CX2g021931 | LOC_Os02g12570 | Os02g0217500 | - | Detail |
| C2H2g00474 | 2:6,046,289-6,050,559 | - | C1H2g08914 | CX2g021895 | LOC_Os02g12580 | Os02g0217600 | OsPP2A-3 | Detail |
| C2H2g14099 | 2:6,053,911-6,058,861 | + | C1H2g12784 | CX2g020586 | LOC_Os02g12600 | Os02g0217800 | - | Detail |
| C2H2g24551 | 2:6,063,925-6,071,277 | + | C1H2g05762 | CX2g023749 | LOC_Os02g12650 | Os02g0218200 | - | Detail |
| C2H2g28393 | 2:6,073,457-6,075,308 | + | - | - | - | - | - | Detail |
| C2H2g28852 | 2:6,075,399-6,079,403 | - | C1H2g24654 | CX2g022045 | LOC_Os02g12660 | Os02g0218400 | - | Detail |
| C2H2g15247 | 2:6,081,736-6,082,080 | - | C1H2g26993 | - | - | Os02g0218550 | - | Detail |
| C2H2g19601 | 2:6,081,842-6,089,001 | + | C1H2g21561 | CX2g024682 | LOC_Os02g12670 | Os02g0218600 | - | Detail |
| C2H2g01092 | 2:6,113,898-6,115,205 | - | C1H2g22168 | CX2g023095 | LOC_Os02g12710 | Os02g0219050 | - | Detail |
| C2H2g08176 | 2:6,121,532-6,126,661 | - | C1H2g02339 | CX2g024197 | LOC_Os02g12730 | Os02g0219200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000691 | 1:33,218,738-33,221,298 | - | C1H1g09141 | C2H1g11092 | LOC_Os01g64730 | Os01g0867300 | BZIP12, OsbZIP12, OsABF1 | Detail |
| CX1g007025 | 1:33,223,782-33,223,949 | - | - | - | - | - | - | Detail |
| CX1g004395 | 1:33,231,060-33,239,112 | + | C1H1g05827 | C2H1g28759 | LOC_Os01g64750 | Os01g0867600 | - | Detail |
| CX1g001594 | 1:33,240,148-33,242,129 | + | C1H1g05655 | C2H1g15067 | LOC_Os01g64760 | Os01g0867700 | - | Detail |
| CX1g006145 | 1:33,243,624-33,247,288 | + | C1H1g18522 | C2H1g28339 | LOC_Os01g64770 | Os01g0867800 | OsPTB1 | Detail |
| CX1g001130 | 1:33,248,077-33,250,798 | - | C1H1g30751 | C2H1g30207 | LOC_Os01g64780 | Os01g0867900 | - | Detail |
| CX1g003660 | 1:33,253,031-33,255,675 | - | C1H1g06977 | C2H1g00754 | LOC_Os01g64790 | Os01g0868000 | ERF99, OsEREBP2, EREBP2, OsERF#099, OsERF099, OsERF99, AP2/EREBP#080, AP2/EREBP80 | Detail |
| CX1g001548 | 1:33,277,152-33,281,367 | - | C1H1g15696 | C2H1g16482 | LOC_Os01g64810 | Os01g0868200 | - | Detail |
| CX1g000694 | 1:33,285,156-33,295,071 | - | C1H1g06751 | C2H1g13803 | LOC_Os01g64820 | Os01g0868300 | - | Detail |
| CX1g005471 | 1:33,301,360-33,302,817 | + | C1H1g05607 | C2H1g22549 | LOC_Os01g64840 | Os01g0868600 | - | Detail |
| CX1g000216 | 1:33,305,359-33,307,632 | + | C1H1g26609 | C2H1g27055 | LOC_Os01g64850 | Os01g0868800 | - | Detail |
| CX1g007065 | 1:33,310,129-33,312,399 | + | C1H1g03086 | C2H1g27055 | LOC_Os01g64860 | Os01g0868900 | - | Detail |
| CX1g007144 | 1:33,313,864-33,319,715 | - | C1H1g21599 | C2H1g17173 | LOC_Os01g64870 | Os01g0869000 | - | Detail |
| CX1g007080 | 1:33,321,084-33,323,463 | + | C1H1g30307 | C2H1g09905 | LOC_Os01g64890 | Os01g0869200 | OsMGT1, OsMRS2-2 | Detail |
| CX1g002156 | 1:33,324,027-33,338,128 | - | C1H1g03661 | C2H1g06937 | LOC_Os01g64900 | Os01g0869300 | - | Detail |
| CX1g005021 | 1:33,339,235-33,340,533 | + | - | - | - | Os01g0869450 | - | Detail |
| CX1g002614 | 1:33,342,937-33,345,353 | - | C1H1g25047 | C2H1g30680 | LOC_Os01g64920 | Os01g0869500 | - | Detail |
| CX1g001436 | 1:33,346,681-33,349,294 | + | C1H1g19257 | C2H1g14315 | LOC_Os01g64930 | Os01g0869600 | - | Detail |
| CX1g002829 | 1:33,350,786-33,353,072 | + | C1H1g00245 | C2H1g12747 | LOC_Os01g64960 | Os01g0869800 | PSBS1, OsPsbS1, PsbS1 | Detail |
| CX1g002612 | 1:33,359,405-33,359,596 | - | - | - | - | - | - | Detail |