| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g17420 | 12:576,328-576,815 | - | C1H11g07924 | CX11g011992 | - | - | - | Detail |
| C2H12g21007 | 12:577,403-582,931 | + | C1H12g10573 | CX12g017281 | LOC_Os12g02130 | Os12g0112600 | - | Detail |
| C2H12g15227 | 12:587,768-589,454 | + | C1H12g21697 | CX12g016942 | LOC_Os12g02150 | Os12g0112800 | - | Detail |
| C2H12g26510 | 12:614,749-615,195 | - | C1H11g09702 | CX12g016971 | LOC_Os12g02210 | Os12g0113700 | - | Detail |
| C2H12g25203 | 12:616,927-618,834 | + | C1H12g19599 | CX12g016492 | LOC_Os12g02230 | Os12g0113900 | - | Detail |
| C2H12g01364 | 12:622,997-627,989 | - | C1H12g09257 | CX12g018666 | LOC_Os12g02250 | Os12g0114100 | - | Detail |
| C2H12g16786 | 12:631,503-632,558 | + | C1H12g12697 | CX12g017586 | - | Os07g0631500 | - | Detail |
| C2H12g25278 | 12:633,669-641,140 | - | C1H12g19945 | CX12g018689 | LOC_Os12g02260 | Os12g0114200 | - | Detail |
| C2H12g02687 | 12:661,889-662,788 | + | C1H12g28409 | - | LOC_Os12g02310 | Os12g0115000 | LTPC1 | Detail |
| C2H12g29120 | 12:686,886-688,007 | - | C1H12g16682 | CX12g015227 | LOC_Os12g02370 | Os12g0115700 | OsCHIL2 | Detail |
| C2H12g30415 | 12:689,434-691,909 | + | C1H12g13992 | CX12g018356 | LOC_Os12g02380 | Os12g0115900 | - | Detail |
| C2H12g22137 | 12:692,281-700,295 | - | C1H12g11893 | CX12g017180 | LOC_Os11g02460 | Os12g0116000 | - | Detail |
| C2H12g20641 | 12:701,612-702,907 | - | C1H12g28204 | CX12g015666 | LOC_Os12g02400 | Os12g0116100 | OsWRKY114 | Detail |
| C2H12g12304 | 12:724,976-726,010 | - | C1H12g11890 | CX12g018039 | LOC_Os12g02440 | Os12g0116600 | - | Detail |
| C2H12g07276 | 12:730,152-731,391 | - | C1H11g22300 | CX12g015666 | LOC_Os12g02450 | Os12g0116700 | OsWRKY64 | Detail |
| C2H12g00570 | 12:737,668-739,200 | - | C1H12g31265 | CX12g015666 | LOC_Os12g02470 | Os12g0116800 | OsWRKY65 | Detail |
| C2H12g24474 | 12:747,212-751,283 | - | C1H12g18259 | CX12g015559 | LOC_Os12g02490 | Os11g0117700 | - | Detail |
| C2H12g05739 | 12:755,673-756,760 | + | C1H12g22137 | CX12g015723 | LOC_Os12g02500 | Os12g0117100 | - | Detail |
| C2H12g05075 | 12:757,387-759,134 | + | C1H12g11262 | CX12g015723 | LOC_Os12g02510 | Os12g0117200 | - | Detail |
| C2H12g16005 | 12:760,160-761,669 | - | C1H12g13059 | CX12g017747 | LOC_Os11g02600 | Os12g0117300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000691 | 1:33,218,738-33,221,298 | - | C1H1g09141 | C2H1g11092 | LOC_Os01g64730 | Os01g0867300 | BZIP12, OsbZIP12, OsABF1 | Detail |
| CX1g007025 | 1:33,223,782-33,223,949 | - | - | - | - | - | - | Detail |
| CX1g004395 | 1:33,231,060-33,239,112 | + | C1H1g05827 | C2H1g28759 | LOC_Os01g64750 | Os01g0867600 | - | Detail |
| CX1g001594 | 1:33,240,148-33,242,129 | + | C1H1g05655 | C2H1g15067 | LOC_Os01g64760 | Os01g0867700 | - | Detail |
| CX1g006145 | 1:33,243,624-33,247,288 | + | C1H1g18522 | C2H1g28339 | LOC_Os01g64770 | Os01g0867800 | OsPTB1 | Detail |
| CX1g001130 | 1:33,248,077-33,250,798 | - | C1H1g30751 | C2H1g30207 | LOC_Os01g64780 | Os01g0867900 | - | Detail |
| CX1g003660 | 1:33,253,031-33,255,675 | - | C1H1g06977 | C2H1g00754 | LOC_Os01g64790 | Os01g0868000 | ERF99, OsEREBP2, EREBP2, OsERF#099, OsERF099, OsERF99, AP2/EREBP#080, AP2/EREBP80 | Detail |
| CX1g001548 | 1:33,277,152-33,281,367 | - | C1H1g15696 | C2H1g16482 | LOC_Os01g64810 | Os01g0868200 | - | Detail |
| CX1g000694 | 1:33,285,156-33,295,071 | - | C1H1g06751 | C2H1g13803 | LOC_Os01g64820 | Os01g0868300 | - | Detail |
| CX1g005471 | 1:33,301,360-33,302,817 | + | C1H1g05607 | C2H1g22549 | LOC_Os01g64840 | Os01g0868600 | - | Detail |
| CX1g000216 | 1:33,305,359-33,307,632 | + | C1H1g26609 | C2H1g27055 | LOC_Os01g64850 | Os01g0868800 | - | Detail |
| CX1g007065 | 1:33,310,129-33,312,399 | + | C1H1g03086 | C2H1g27055 | LOC_Os01g64860 | Os01g0868900 | - | Detail |
| CX1g007144 | 1:33,313,864-33,319,715 | - | C1H1g21599 | C2H1g17173 | LOC_Os01g64870 | Os01g0869000 | - | Detail |
| CX1g007080 | 1:33,321,084-33,323,463 | + | C1H1g30307 | C2H1g09905 | LOC_Os01g64890 | Os01g0869200 | OsMGT1, OsMRS2-2 | Detail |
| CX1g002156 | 1:33,324,027-33,338,128 | - | C1H1g03661 | C2H1g06937 | LOC_Os01g64900 | Os01g0869300 | - | Detail |
| CX1g005021 | 1:33,339,235-33,340,533 | + | - | - | - | Os01g0869450 | - | Detail |
| CX1g002614 | 1:33,342,937-33,345,353 | - | C1H1g25047 | C2H1g30680 | LOC_Os01g64920 | Os01g0869500 | - | Detail |
| CX1g001436 | 1:33,346,681-33,349,294 | + | C1H1g19257 | C2H1g14315 | LOC_Os01g64930 | Os01g0869600 | - | Detail |
| CX1g002829 | 1:33,350,786-33,353,072 | + | C1H1g00245 | C2H1g12747 | LOC_Os01g64960 | Os01g0869800 | PSBS1, OsPsbS1, PsbS1 | Detail |
| CX1g002612 | 1:33,359,405-33,359,596 | - | - | - | - | - | - | Detail |