| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g27753 | 11:3,696,855-3,700,159 | - | C1H11g22592 | CX11g014704 | LOC_Os11g08400 | Os11g0187100 | - | Detail |
| C2H11g00409 | 11:3,714,247-3,717,356 | + | C1H11g23754 | CX11g013260 | LOC_Os11g08440 | Os11g0187500 | - | Detail |
| C2H11g21129 | 11:3,735,613-3,738,730 | - | C1H11g12403 | CX11g010954 | LOC_Os11g08460 | Os11g0187600 | - | Detail |
| C2H11g20573 | 11:3,746,734-3,749,883 | - | C1H11g23413 | CX11g014509 | LOC_Os11g08470 | Os11g0187500 | - | Detail |
| C2H11g14619 | 11:3,778,034-3,791,339 | + | C1H11g23968 | CX11g013581 | LOC_Os11g08569 | Os11g0189600 | - | Detail |
| C2H11g20977 | 11:3,797,940-3,804,076 | + | C1H11g22913 | CX11g011066 | LOC_Os11g08569 | Os11g0189600 | - | Detail |
| C2H11g26546 | 11:3,808,405-3,817,631 | - | C1H11g10468 | CX11g012982 | LOC_Os11g08590 | Os11g0189900 | - | Detail |
| C2H11g29669 | 11:3,864,508-3,873,731 | + | C1H11g25835 | CX11g011671 | LOC_Os11g08660 | Os11g0191300 | - | Detail |
| C2H11g19184 | 11:3,875,456-3,882,489 | + | C1H11g28039 | CX11g012982 | LOC_Os11g08670 | Os11g0191400 | - | Detail |
| C2H11g28044 | 11:3,895,452-3,896,165 | - | C1H11g18680 | CX11g014240 | LOC_Os11g08918 | Os11g0193800 | - | Detail |
| C2H11g03117 | 11:3,898,386-3,898,688 | - | - | - | - | - | - | Detail |
| C2H11g05785 | 11:3,905,203-3,905,712 | - | C1H11g07281 | CX11g012315 | LOC_Os11g08760 | Os11g0192500 | - | Detail |
| C2H11g16644 | 11:3,916,594-3,918,440 | + | C1H11g29353 | CX11g014246 | LOC_Os11g08750 | Os11g0192400 | - | Detail |
| C2H11g03438 | 11:3,933,566-3,934,126 | - | C1H11g02352 | CX11g014524 | LOC_Os11g08860 | Os11g0194100 | OsPMEI41 | Detail |
| C2H11g13650 | 11:3,935,618-3,938,058 | - | C1H11g05928 | - | - | - | - | Detail |
| C2H11g17029 | 11:3,942,661-3,944,453 | + | C1H11g00706 | CX11g013175 | LOC_Os11g08940 | Os11g0194800 | - | Detail |
| C2H11g22885 | 11:3,945,609-3,949,481 | - | C1H11g10333 | CX11g014621 | LOC_Os11g08950 | Os11g0194900 | - | Detail |
| C2H11g27751 | 11:3,966,474-3,966,790 | - | C1H11g04398 | - | - | - | - | Detail |
| C2H11g01028 | 11:3,970,379-3,971,123 | - | C1H11g15377 | CX11g013394 | LOC_Os11g08970 | Os11g0195000 | - | Detail |
| C2H11g29460 | 11:3,971,465-3,980,645 | + | C1H11g04515 | CX11g014274 | LOC_Os11g08980 | Os11g0195100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000691 | 1:33,218,738-33,221,298 | - | C1H1g09141 | C2H1g11092 | LOC_Os01g64730 | Os01g0867300 | BZIP12, OsbZIP12, OsABF1 | Detail |
| CX1g007025 | 1:33,223,782-33,223,949 | - | - | - | - | - | - | Detail |
| CX1g004395 | 1:33,231,060-33,239,112 | + | C1H1g05827 | C2H1g28759 | LOC_Os01g64750 | Os01g0867600 | - | Detail |
| CX1g001594 | 1:33,240,148-33,242,129 | + | C1H1g05655 | C2H1g15067 | LOC_Os01g64760 | Os01g0867700 | - | Detail |
| CX1g006145 | 1:33,243,624-33,247,288 | + | C1H1g18522 | C2H1g28339 | LOC_Os01g64770 | Os01g0867800 | OsPTB1 | Detail |
| CX1g001130 | 1:33,248,077-33,250,798 | - | C1H1g30751 | C2H1g30207 | LOC_Os01g64780 | Os01g0867900 | - | Detail |
| CX1g003660 | 1:33,253,031-33,255,675 | - | C1H1g06977 | C2H1g00754 | LOC_Os01g64790 | Os01g0868000 | ERF99, OsEREBP2, EREBP2, OsERF#099, OsERF099, OsERF99, AP2/EREBP#080, AP2/EREBP80 | Detail |
| CX1g001548 | 1:33,277,152-33,281,367 | - | C1H1g15696 | C2H1g16482 | LOC_Os01g64810 | Os01g0868200 | - | Detail |
| CX1g000694 | 1:33,285,156-33,295,071 | - | C1H1g06751 | C2H1g13803 | LOC_Os01g64820 | Os01g0868300 | - | Detail |
| CX1g005471 | 1:33,301,360-33,302,817 | + | C1H1g05607 | C2H1g22549 | LOC_Os01g64840 | Os01g0868600 | - | Detail |
| CX1g000216 | 1:33,305,359-33,307,632 | + | C1H1g26609 | C2H1g27055 | LOC_Os01g64850 | Os01g0868800 | - | Detail |
| CX1g007065 | 1:33,310,129-33,312,399 | + | C1H1g03086 | C2H1g27055 | LOC_Os01g64860 | Os01g0868900 | - | Detail |
| CX1g007144 | 1:33,313,864-33,319,715 | - | C1H1g21599 | C2H1g17173 | LOC_Os01g64870 | Os01g0869000 | - | Detail |
| CX1g007080 | 1:33,321,084-33,323,463 | + | C1H1g30307 | C2H1g09905 | LOC_Os01g64890 | Os01g0869200 | OsMGT1, OsMRS2-2 | Detail |
| CX1g002156 | 1:33,324,027-33,338,128 | - | C1H1g03661 | C2H1g06937 | LOC_Os01g64900 | Os01g0869300 | - | Detail |
| CX1g005021 | 1:33,339,235-33,340,533 | + | - | - | - | Os01g0869450 | - | Detail |
| CX1g002614 | 1:33,342,937-33,345,353 | - | C1H1g25047 | C2H1g30680 | LOC_Os01g64920 | Os01g0869500 | - | Detail |
| CX1g001436 | 1:33,346,681-33,349,294 | + | C1H1g19257 | C2H1g14315 | LOC_Os01g64930 | Os01g0869600 | - | Detail |
| CX1g002829 | 1:33,350,786-33,353,072 | + | C1H1g00245 | C2H1g12747 | LOC_Os01g64960 | Os01g0869800 | PSBS1, OsPsbS1, PsbS1 | Detail |
| CX1g002612 | 1:33,359,405-33,359,596 | - | - | - | - | - | - | Detail |