| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g11007 | 5:21,751,839-21,754,410 | + | C1H5g09160 | CX2g020717 | LOC_Os05g44550 | - | - | Detail |
| C2H5g01580 | 5:21,756,862-21,764,434 | - | C1H5g15943 | CX5g037570 | LOC_Os05g44560 | Os05g0397900 | - | Detail |
| C2H5g06721 | 5:21,766,922-21,769,347 | - | C1H5g15028 | CX5g040762 | LOC_Os05g44570 | Os05g0521300 | - | Detail |
| C2H5g11284 | 5:21,773,403-21,776,983 | + | C1H5g27271 | CX5g040709 | - | Os05g0521400 | - | Detail |
| C2H5g26977 | 5:21,779,250-21,784,672 | + | C1H5g22714 | CX5g039109 | LOC_Os05g44590 | Os05g0521500 | - | Detail |
| C2H5g14641 | 5:21,786,344-21,789,447 | + | C1H5g12005 | CX5g038255 | LOC_Os05g44600 | Os05g0521600 | - | Detail |
| C2H5g07449 | 5:21,792,000-21,793,025 | + | - | CX5g041159 | - | - | - | Detail |
| C2H5g18579 | 5:21,797,866-21,800,923 | - | C1H5g04739 | CX5g036755 | LOC_Os05g44630 | Os05g0521900 | - | Detail |
| C2H5g21908 | 5:21,808,786-21,813,508 | + | C1H5g28062 | CX5g037506 | LOC_Os05g44760 | Os05g0522500 | OsHXK5 | Detail |
| C2H5g17737 | 5:21,813,433-21,817,047 | - | C1H5g03113 | CX5g036790 | LOC_Os05g44770 | Os05g0522600 | - | Detail |
| C2H5g20123 | 5:21,819,482-21,820,186 | - | C1H5g12912 | CX5g037587 | LOC_Os05g44780 | Os05g0522700 | - | Detail |
| C2H5g25706 | 5:21,826,958-21,829,361 | - | C1H5g11095 | CX5g039399 | LOC_Os05g44810 | Os05g0523300 | OsIAA18 | Detail |
| C2H5g29240 | 5:21,833,026-21,833,625 | - | - | - | - | - | - | Detail |
| C2H5g29517 | 5:21,842,261-21,845,584 | - | C1H5g00746 | CX5g039562 | LOC_Os05g44910 | Os05g0524200 | - | Detail |
| C2H5g22943 | 5:21,847,513-21,851,102 | + | C1H5g24165 | CX5g038177 | LOC_Os05g44916 | Os05g0524300 | - | Detail |
| C2H5g10764 | 5:21,852,551-21,857,283 | + | C1H5g22941 | CX5g039367 | LOC_Os05g44922 | Os05g0524400 | - | Detail |
| C2H5g04969 | 5:21,858,199-21,861,002 | + | C1H5g02947 | CX5g040988 | LOC_Os05g44930 | Os05g0524500 | - | Detail |
| C2H5g15304 | 5:21,861,404-21,862,958 | + | C1H5g09944 | CX5g040988 | LOC_Os05g44930 | Os05g0524500 | - | Detail |
| C2H5g08028 | 5:21,866,062-21,867,048 | + | C1H5g25393 | CX5g040988 | LOC_Os05g44940 | Os05g0524600 | - | Detail |
| C2H5g12376 | 5:21,868,189-21,870,257 | + | C1H5g09028 | CX5g040988 | LOC_Os05g44940 | Os05g0524600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000691 | 1:33,218,738-33,221,298 | - | C1H1g09141 | C2H1g11092 | LOC_Os01g64730 | Os01g0867300 | BZIP12, OsbZIP12, OsABF1 | Detail |
| CX1g007025 | 1:33,223,782-33,223,949 | - | - | - | - | - | - | Detail |
| CX1g004395 | 1:33,231,060-33,239,112 | + | C1H1g05827 | C2H1g28759 | LOC_Os01g64750 | Os01g0867600 | - | Detail |
| CX1g001594 | 1:33,240,148-33,242,129 | + | C1H1g05655 | C2H1g15067 | LOC_Os01g64760 | Os01g0867700 | - | Detail |
| CX1g006145 | 1:33,243,624-33,247,288 | + | C1H1g18522 | C2H1g28339 | LOC_Os01g64770 | Os01g0867800 | OsPTB1 | Detail |
| CX1g001130 | 1:33,248,077-33,250,798 | - | C1H1g30751 | C2H1g30207 | LOC_Os01g64780 | Os01g0867900 | - | Detail |
| CX1g003660 | 1:33,253,031-33,255,675 | - | C1H1g06977 | C2H1g00754 | LOC_Os01g64790 | Os01g0868000 | ERF99, OsEREBP2, EREBP2, OsERF#099, OsERF099, OsERF99, AP2/EREBP#080, AP2/EREBP80 | Detail |
| CX1g001548 | 1:33,277,152-33,281,367 | - | C1H1g15696 | C2H1g16482 | LOC_Os01g64810 | Os01g0868200 | - | Detail |
| CX1g000694 | 1:33,285,156-33,295,071 | - | C1H1g06751 | C2H1g13803 | LOC_Os01g64820 | Os01g0868300 | - | Detail |
| CX1g005471 | 1:33,301,360-33,302,817 | + | C1H1g05607 | C2H1g22549 | LOC_Os01g64840 | Os01g0868600 | - | Detail |
| CX1g000216 | 1:33,305,359-33,307,632 | + | C1H1g26609 | C2H1g27055 | LOC_Os01g64850 | Os01g0868800 | - | Detail |
| CX1g007065 | 1:33,310,129-33,312,399 | + | C1H1g03086 | C2H1g27055 | LOC_Os01g64860 | Os01g0868900 | - | Detail |
| CX1g007144 | 1:33,313,864-33,319,715 | - | C1H1g21599 | C2H1g17173 | LOC_Os01g64870 | Os01g0869000 | - | Detail |
| CX1g007080 | 1:33,321,084-33,323,463 | + | C1H1g30307 | C2H1g09905 | LOC_Os01g64890 | Os01g0869200 | OsMGT1, OsMRS2-2 | Detail |
| CX1g002156 | 1:33,324,027-33,338,128 | - | C1H1g03661 | C2H1g06937 | LOC_Os01g64900 | Os01g0869300 | - | Detail |
| CX1g005021 | 1:33,339,235-33,340,533 | + | - | - | - | Os01g0869450 | - | Detail |
| CX1g002614 | 1:33,342,937-33,345,353 | - | C1H1g25047 | C2H1g30680 | LOC_Os01g64920 | Os01g0869500 | - | Detail |
| CX1g001436 | 1:33,346,681-33,349,294 | + | C1H1g19257 | C2H1g14315 | LOC_Os01g64930 | Os01g0869600 | - | Detail |
| CX1g002829 | 1:33,350,786-33,353,072 | + | C1H1g00245 | C2H1g12747 | LOC_Os01g64960 | Os01g0869800 | PSBS1, OsPsbS1, PsbS1 | Detail |
| CX1g002612 | 1:33,359,405-33,359,596 | - | - | - | - | - | - | Detail |