| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g18428 | 4:26,522,638-26,525,709 | - | C2H4g00401 | CX4g033941 | LOC_Os01g43980 | - | - | Detail |
| C1H4g08994 | 4:26,529,593-26,530,784 | + | C2H4g05605 | CX4g035594 | LOC_Os04g51510 | Os04g0604800 | - | Detail |
| C1H4g02562 | 4:26,531,220-26,536,216 | - | C2H4g08080 | CX4g035034 | LOC_Os04g51520 | Os04g0604900 | - | Detail |
| C1H4g24671 | 4:26,545,410-26,546,667 | + | C2H4g16240 | CX4g031874 | LOC_Os04g51560 | Os04g0605100 | - | Detail |
| C1H4g04903 | 4:26,553,082-26,554,962 | + | C2H4g16496 | CX4g031726 | LOC_Os04g51570 | Os04g0605200 | - | Detail |
| C1H4g26879 | 4:26,555,098-26,558,765 | - | C2H4g17480 | CX4g031756 | LOC_Os04g51580 | Os04g0605300 | - | Detail |
| C1H4g23236 | 4:26,568,330-26,580,503 | - | C2H4g19075 | CX4g033983 | LOC_Os04g51610 | Os04g0605500 | - | Detail |
| C1H4g26899 | 4:26,594,144-26,596,413 | + | C2H4g03623 | CX4g032768 | LOC_Os04g51630 | Os04g0605900 | - | Detail |
| C1H4g07538 | 4:26,615,805-26,623,689 | - | C2H4g09768 | CX4g035562 | LOC_Os04g51690 | Os04g0606400 | - | Detail |
| C1H4g23567 | 4:26,625,601-26,634,736 | - | C2H4g16864 | CX4g032296 | LOC_Os04g51700 | Os04g0606450 | Lig4, OsLig4 | Detail |
| C1H4g24052 | 4:26,638,077-26,641,839 | - | C2H4g07503 | CX4g031830 | LOC_Os04g51710 | Os04g0606500 | - | Detail |
| C1H4g00992 | 4:26,650,085-26,651,927 | - | C2H4g13069 | - | LOC_Os04g51770 | Os04g0606700 | - | Detail |
| C1H4g11799 | 4:26,652,379-26,655,463 | + | C2H4g17807 | CX4g031371 | LOC_Os04g51780 | Os04g0606800 | - | Detail |
| C1H4g07895 | 4:26,656,056-26,657,905 | - | C2H4g29943 | - | LOC_Os04g51786 | Os04g0606900 | - | Detail |
| C1H4g22362 | 4:26,658,507-26,659,858 | - | C2H4g13335 | CX4g036256 | LOC_Os04g51792 | Os04g0607000 | - | Detail |
| C1H4g16042 | 4:26,660,534-26,666,001 | - | C2H4g07238 | CX4g034204 | LOC_Os04g51794 | Os04g0607100 | - | Detail |
| C1H4g27180 | 4:26,667,018-26,670,880 | - | C2H4g02950 | CX4g032199 | LOC_Os04g51796 | Os04g0607150 | - | Detail |
| C1H4g02078 | 4:26,671,976-26,674,560 | + | C2H4g22258 | CX4g035845 | - | - | - | Detail |
| C1H4g06166 | 4:26,692,999-26,695,216 | - | C2H4g06267 | CX4g032647 | LOC_Os04g51820 | Os04g0607500 | - | Detail |
| C1H4g21868 | 4:26,696,347-26,697,730 | + | - | - | - | Os04g0607566 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000691 | 1:33,218,738-33,221,298 | - | C1H1g09141 | C2H1g11092 | LOC_Os01g64730 | Os01g0867300 | BZIP12, OsbZIP12, OsABF1 | Detail |
| CX1g007025 | 1:33,223,782-33,223,949 | - | - | - | - | - | - | Detail |
| CX1g004395 | 1:33,231,060-33,239,112 | + | C1H1g05827 | C2H1g28759 | LOC_Os01g64750 | Os01g0867600 | - | Detail |
| CX1g001594 | 1:33,240,148-33,242,129 | + | C1H1g05655 | C2H1g15067 | LOC_Os01g64760 | Os01g0867700 | - | Detail |
| CX1g006145 | 1:33,243,624-33,247,288 | + | C1H1g18522 | C2H1g28339 | LOC_Os01g64770 | Os01g0867800 | OsPTB1 | Detail |
| CX1g001130 | 1:33,248,077-33,250,798 | - | C1H1g30751 | C2H1g30207 | LOC_Os01g64780 | Os01g0867900 | - | Detail |
| CX1g003660 | 1:33,253,031-33,255,675 | - | C1H1g06977 | C2H1g00754 | LOC_Os01g64790 | Os01g0868000 | ERF99, OsEREBP2, EREBP2, OsERF#099, OsERF099, OsERF99, AP2/EREBP#080, AP2/EREBP80 | Detail |
| CX1g001548 | 1:33,277,152-33,281,367 | - | C1H1g15696 | C2H1g16482 | LOC_Os01g64810 | Os01g0868200 | - | Detail |
| CX1g000694 | 1:33,285,156-33,295,071 | - | C1H1g06751 | C2H1g13803 | LOC_Os01g64820 | Os01g0868300 | - | Detail |
| CX1g005471 | 1:33,301,360-33,302,817 | + | C1H1g05607 | C2H1g22549 | LOC_Os01g64840 | Os01g0868600 | - | Detail |
| CX1g000216 | 1:33,305,359-33,307,632 | + | C1H1g26609 | C2H1g27055 | LOC_Os01g64850 | Os01g0868800 | - | Detail |
| CX1g007065 | 1:33,310,129-33,312,399 | + | C1H1g03086 | C2H1g27055 | LOC_Os01g64860 | Os01g0868900 | - | Detail |
| CX1g007144 | 1:33,313,864-33,319,715 | - | C1H1g21599 | C2H1g17173 | LOC_Os01g64870 | Os01g0869000 | - | Detail |
| CX1g007080 | 1:33,321,084-33,323,463 | + | C1H1g30307 | C2H1g09905 | LOC_Os01g64890 | Os01g0869200 | OsMGT1, OsMRS2-2 | Detail |
| CX1g002156 | 1:33,324,027-33,338,128 | - | C1H1g03661 | C2H1g06937 | LOC_Os01g64900 | Os01g0869300 | - | Detail |
| CX1g005021 | 1:33,339,235-33,340,533 | + | - | - | - | Os01g0869450 | - | Detail |
| CX1g002614 | 1:33,342,937-33,345,353 | - | C1H1g25047 | C2H1g30680 | LOC_Os01g64920 | Os01g0869500 | - | Detail |
| CX1g001436 | 1:33,346,681-33,349,294 | + | C1H1g19257 | C2H1g14315 | LOC_Os01g64930 | Os01g0869600 | - | Detail |
| CX1g002829 | 1:33,350,786-33,353,072 | + | C1H1g00245 | C2H1g12747 | LOC_Os01g64960 | Os01g0869800 | PSBS1, OsPsbS1, PsbS1 | Detail |
| CX1g002612 | 1:33,359,405-33,359,596 | - | - | - | - | - | - | Detail |