| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g15725 | 2:14,990,942-14,992,953 | + | C2H2g14964 | CX2g021903 | LOC_Os02g26300 | Os02g0461200 | - | Detail |
| C1H2g08562 | 2:14,993,940-14,995,741 | + | C2H2g14964 | - | LOC_Os02g26300 | Os02g0461200 | - | Detail |
| C1H2g18802 | 2:15,028,419-15,031,508 | - | C2H2g01724 | CX2g020756 | LOC_Os02g26370 | Os02g0461900 | - | Detail |
| C1H2g15670 | 2:15,035,329-15,035,805 | + | C2H2g28389 | - | - | - | - | Detail |
| C1H2g03987 | 2:15,040,839-15,048,931 | + | C2H2g01116 | - | - | - | - | Detail |
| C1H2g09069 | 2:15,054,256-15,059,889 | - | C2H2g28297 | CX2g021428 | LOC_Os02g26400 | Os02g0462300 | - | Detail |
| C1H2g27968 | 2:15,064,343-15,066,192 | + | - | - | - | - | - | Detail |
| C1H2g21982 | 2:15,067,648-15,068,592 | + | C2H2g04148 | CX2g022930 | LOC_Os02g26430 | Os02g0462800 | WRKY42, OsWRKY42 | Detail |
| C1H2g26806 | 2:15,070,053-15,077,433 | + | C2H2g20091 | CX2g022979 | LOC_Os02g26440 | Os02g0462900 | - | Detail |
| C1H2g18666 | 2:15,090,883-15,091,801 | - | C2H2g05390 | - | LOC_Os02g26470 | Os02g0463401 | - | Detail |
| C1H2g19353 | 2:15,096,441-15,101,213 | - | C2H2g12721 | CX2g019545 | LOC_Os02g26480 | Os02g0463500 | - | Detail |
| C1H2g22877 | 2:15,103,565-15,103,789 | - | C2H2g12721 | CX2g019545 | LOC_Os02g26480 | Os02g0463500 | - | Detail |
| C1H2g26039 | 2:15,122,512-15,126,874 | + | C2H2g18685 | CX2g022576 | LOC_Os02g26560 | Os02g0464500 | - | Detail |
| C1H2g02830 | 2:15,133,571-15,137,248 | - | C2H2g05215 | CX2g020584 | LOC_Os02g26600 | Os02g0464900 | - | Detail |
| C1H2g24229 | 2:15,153,976-15,160,295 | - | C2H2g20421 | CX2g024852 | LOC_Os02g26650 | Os02g0465400 | OsDHCR7 | Detail |
| C1H2g12128 | 2:15,178,293-15,180,504 | - | - | - | - | - | - | Detail |
| C1H2g25809 | 2:15,182,545-15,186,784 | - | C2H2g06691 | CX2g022338 | LOC_Os02g26660 | Os02g0465500 | - | Detail |
| C1H2g20670 | 2:15,199,345-15,202,563 | - | C2H2g12733 | CX2g019150 | LOC_Os02g26700 | Os02g0465900 | OsARP, OsCTP | Detail |
| C1H2g16591 | 2:15,239,849-15,242,066 | - | C2H2g15284 | CX2g022703 | LOC_Os02g26770 | Os02g0467600 | - | Detail |
| C1H2g27142 | 2:15,251,344-15,253,351 | + | C2H2g11442 | CX2g020093 | LOC_Os02g26810 | Os02g0467600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000691 | 1:33,218,738-33,221,298 | - | C1H1g09141 | C2H1g11092 | LOC_Os01g64730 | Os01g0867300 | BZIP12, OsbZIP12, OsABF1 | Detail |
| CX1g007025 | 1:33,223,782-33,223,949 | - | - | - | - | - | - | Detail |
| CX1g004395 | 1:33,231,060-33,239,112 | + | C1H1g05827 | C2H1g28759 | LOC_Os01g64750 | Os01g0867600 | - | Detail |
| CX1g001594 | 1:33,240,148-33,242,129 | + | C1H1g05655 | C2H1g15067 | LOC_Os01g64760 | Os01g0867700 | - | Detail |
| CX1g006145 | 1:33,243,624-33,247,288 | + | C1H1g18522 | C2H1g28339 | LOC_Os01g64770 | Os01g0867800 | OsPTB1 | Detail |
| CX1g001130 | 1:33,248,077-33,250,798 | - | C1H1g30751 | C2H1g30207 | LOC_Os01g64780 | Os01g0867900 | - | Detail |
| CX1g003660 | 1:33,253,031-33,255,675 | - | C1H1g06977 | C2H1g00754 | LOC_Os01g64790 | Os01g0868000 | ERF99, OsEREBP2, EREBP2, OsERF#099, OsERF099, OsERF99, AP2/EREBP#080, AP2/EREBP80 | Detail |
| CX1g001548 | 1:33,277,152-33,281,367 | - | C1H1g15696 | C2H1g16482 | LOC_Os01g64810 | Os01g0868200 | - | Detail |
| CX1g000694 | 1:33,285,156-33,295,071 | - | C1H1g06751 | C2H1g13803 | LOC_Os01g64820 | Os01g0868300 | - | Detail |
| CX1g005471 | 1:33,301,360-33,302,817 | + | C1H1g05607 | C2H1g22549 | LOC_Os01g64840 | Os01g0868600 | - | Detail |
| CX1g000216 | 1:33,305,359-33,307,632 | + | C1H1g26609 | C2H1g27055 | LOC_Os01g64850 | Os01g0868800 | - | Detail |
| CX1g007065 | 1:33,310,129-33,312,399 | + | C1H1g03086 | C2H1g27055 | LOC_Os01g64860 | Os01g0868900 | - | Detail |
| CX1g007144 | 1:33,313,864-33,319,715 | - | C1H1g21599 | C2H1g17173 | LOC_Os01g64870 | Os01g0869000 | - | Detail |
| CX1g007080 | 1:33,321,084-33,323,463 | + | C1H1g30307 | C2H1g09905 | LOC_Os01g64890 | Os01g0869200 | OsMGT1, OsMRS2-2 | Detail |
| CX1g002156 | 1:33,324,027-33,338,128 | - | C1H1g03661 | C2H1g06937 | LOC_Os01g64900 | Os01g0869300 | - | Detail |
| CX1g005021 | 1:33,339,235-33,340,533 | + | - | - | - | Os01g0869450 | - | Detail |
| CX1g002614 | 1:33,342,937-33,345,353 | - | C1H1g25047 | C2H1g30680 | LOC_Os01g64920 | Os01g0869500 | - | Detail |
| CX1g001436 | 1:33,346,681-33,349,294 | + | C1H1g19257 | C2H1g14315 | LOC_Os01g64930 | Os01g0869600 | - | Detail |
| CX1g002829 | 1:33,350,786-33,353,072 | + | C1H1g00245 | C2H1g12747 | LOC_Os01g64960 | Os01g0869800 | PSBS1, OsPsbS1, PsbS1 | Detail |
| CX1g002612 | 1:33,359,405-33,359,596 | - | - | - | - | - | - | Detail |