| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g07544 | 12:102,598-103,917 | + | C2H12g02893 | CX12g017682 | LOC_Os12g01100 | Os11g0101200 | OsRpp30 | Detail |
| C1H12g12488 | 12:127,314-142,590 | + | C2H12g20048 | CX12g015600 | LOC_Os12g01140 | Os12g0101800 | OsNPH1a, OsPHOT1b | Detail |
| C1H12g09986 | 12:146,095-148,796 | + | C2H12g15714 | CX12g018399 | LOC_Os12g01160 | Os12g0102100 | - | Detail |
| C1H12g25436 | 12:149,725-152,579 | + | C2H12g02013 | CX12g017181 | LOC_Os12g01170 | Os12g0102200 | - | Detail |
| C1H12g28474 | 12:159,945-166,674 | + | C2H12g07971 | CX12g017806 | LOC_Os12g01190 | Os12g0102400 | OsRINGC2-2 | Detail |
| C1H12g06345 | 12:166,769-174,343 | - | C2H12g27539 | CX12g018387 | LOC_Os12g01200 | Os12g0102500 | - | Detail |
| C1H12g23007 | 12:183,114-184,169 | + | C2H12g11186 | CX12g018791 | LOC_Os12g01210 | Os12g0102600 | - | Detail |
| C1H12g01531 | 12:184,744-185,769 | + | C2H12g11186 | CX12g018791 | LOC_Os12g01210 | Os12g0102600 | - | Detail |
| C1H12g22834 | 12:186,473-190,678 | - | C2H12g27482 | CX12g016067 | LOC_Os12g01220 | Os12g0102700 | - | Detail |
| C1H12g08323 | 12:191,472-199,298 | + | C2H12g29309 | CX12g015478 | LOC_Os12g01230 | Os12g0102900 | - | Detail |
| C1H12g30443 | 12:206,428-211,338 | - | C2H12g06286 | CX12g017122 | LOC_Os12g01240 | Os12g0103000 | - | Detail |
| C1H12g16522 | 12:229,061-230,378 | + | C2H12g09673 | CX12g017647 | LOC_Os12g01250 | Os12g0103150 | - | Detail |
| C1H12g07971 | 12:242,657-245,709 | + | C2H12g09673 | CX12g016699 | LOC_Os12g01250 | Os12g0103150 | - | Detail |
| C1H12g00720 | 12:246,660-247,943 | + | C2H11g06934 | CX12g018098 | LOC_Os12g01350 | Os12g0104200 | - | Detail |
| C1H12g07188 | 12:267,413-272,742 | + | C2H12g24208 | CX12g015572 | LOC_Os12g01360 | Os12g0104300 | - | Detail |
| C1H12g08293 | 12:273,589-276,661 | - | C2H12g07052 | CX12g015174 | LOC_Os12g01370 | Os12g0104400 | - | Detail |
| C1H12g04111 | 12:289,072-293,595 | + | C2H12g00110 | CX12g017889 | LOC_Os12g01380 | Os12g0104700 | - | Detail |
| C1H12g25419 | 12:296,094-306,499 | + | C2H12g02913 | CX12g015577 | LOC_Os12g01390 | Os12g0104800 | - | Detail |
| C1H12g09737 | 12:322,397-324,374 | - | C2H12g14287 | CX12g017835 | LOC_Os12g01430 | Os12g0105200 | - | Detail |
| C1H12g16869 | 12:325,294-329,835 | - | C2H12g09075 | CX12g016242 | LOC_Os12g01449 | Os12g0105300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000691 | 1:33,218,738-33,221,298 | - | C1H1g09141 | C2H1g11092 | LOC_Os01g64730 | Os01g0867300 | BZIP12, OsbZIP12, OsABF1 | Detail |
| CX1g007025 | 1:33,223,782-33,223,949 | - | - | - | - | - | - | Detail |
| CX1g004395 | 1:33,231,060-33,239,112 | + | C1H1g05827 | C2H1g28759 | LOC_Os01g64750 | Os01g0867600 | - | Detail |
| CX1g001594 | 1:33,240,148-33,242,129 | + | C1H1g05655 | C2H1g15067 | LOC_Os01g64760 | Os01g0867700 | - | Detail |
| CX1g006145 | 1:33,243,624-33,247,288 | + | C1H1g18522 | C2H1g28339 | LOC_Os01g64770 | Os01g0867800 | OsPTB1 | Detail |
| CX1g001130 | 1:33,248,077-33,250,798 | - | C1H1g30751 | C2H1g30207 | LOC_Os01g64780 | Os01g0867900 | - | Detail |
| CX1g003660 | 1:33,253,031-33,255,675 | - | C1H1g06977 | C2H1g00754 | LOC_Os01g64790 | Os01g0868000 | ERF99, OsEREBP2, EREBP2, OsERF#099, OsERF099, OsERF99, AP2/EREBP#080, AP2/EREBP80 | Detail |
| CX1g001548 | 1:33,277,152-33,281,367 | - | C1H1g15696 | C2H1g16482 | LOC_Os01g64810 | Os01g0868200 | - | Detail |
| CX1g000694 | 1:33,285,156-33,295,071 | - | C1H1g06751 | C2H1g13803 | LOC_Os01g64820 | Os01g0868300 | - | Detail |
| CX1g005471 | 1:33,301,360-33,302,817 | + | C1H1g05607 | C2H1g22549 | LOC_Os01g64840 | Os01g0868600 | - | Detail |
| CX1g000216 | 1:33,305,359-33,307,632 | + | C1H1g26609 | C2H1g27055 | LOC_Os01g64850 | Os01g0868800 | - | Detail |
| CX1g007065 | 1:33,310,129-33,312,399 | + | C1H1g03086 | C2H1g27055 | LOC_Os01g64860 | Os01g0868900 | - | Detail |
| CX1g007144 | 1:33,313,864-33,319,715 | - | C1H1g21599 | C2H1g17173 | LOC_Os01g64870 | Os01g0869000 | - | Detail |
| CX1g007080 | 1:33,321,084-33,323,463 | + | C1H1g30307 | C2H1g09905 | LOC_Os01g64890 | Os01g0869200 | OsMGT1, OsMRS2-2 | Detail |
| CX1g002156 | 1:33,324,027-33,338,128 | - | C1H1g03661 | C2H1g06937 | LOC_Os01g64900 | Os01g0869300 | - | Detail |
| CX1g005021 | 1:33,339,235-33,340,533 | + | - | - | - | Os01g0869450 | - | Detail |
| CX1g002614 | 1:33,342,937-33,345,353 | - | C1H1g25047 | C2H1g30680 | LOC_Os01g64920 | Os01g0869500 | - | Detail |
| CX1g001436 | 1:33,346,681-33,349,294 | + | C1H1g19257 | C2H1g14315 | LOC_Os01g64930 | Os01g0869600 | - | Detail |
| CX1g002829 | 1:33,350,786-33,353,072 | + | C1H1g00245 | C2H1g12747 | LOC_Os01g64960 | Os01g0869800 | PSBS1, OsPsbS1, PsbS1 | Detail |
| CX1g002612 | 1:33,359,405-33,359,596 | - | - | - | - | - | - | Detail |