| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g31584 | 9:14,397,174-14,398,148 | - | C2H9g05249 | CX9g055140 | LOC_Os09g28750 | Os09g0462200 | - | Detail |
| C1H9g31193 | 9:14,398,159-14,399,079 | - | C2H9g03017 | - | - | Os09g0462301 | - | Detail |
| C1H9g18452 | 9:14,402,609-14,405,130 | + | C2H9g27701 | CX9g057311 | LOC_Os09g28770 | Os09g0462400 | OsMATL2, OspPLAIIeta, OspPLA-IIalpha | Detail |
| C1H9g29610 | 9:14,407,442-14,407,735 | + | C2H9g19629 | CX9g056435 | LOC_Os09g28780 | Os08g0475500 | OsCEP6, OsCEP6.1 | Detail |
| C1H9g28013 | 9:14,417,767-14,421,876 | + | C2H9g05705 | CX9g055048 | LOC_Os09g28810 | Os09g0462700 | - | Detail |
| C1H9g15723 | 9:14,423,139-14,423,470 | + | C2H9g21321 | - | - | Os09g0462850 | - | Detail |
| C1H9g15089 | 9:14,425,555-14,428,291 | - | C2H9g19364 | CX9g057216 | LOC_Os09g28830 | Os09g0462875 | - | Detail |
| C1H9g24460 | 9:14,431,895-14,435,261 | - | C2H9g06754 | CX9g056317 | LOC_Os09g28840 | Os09g0463100 | - | Detail |
| C1H9g16758 | 9:14,443,505-14,446,049 | - | C2H9g26932 | - | - | - | - | Detail |
| C1H9g08405 | 9:14,445,917-14,450,400 | + | C2H9g17616 | CX9g055989 | LOC_Os09g28850 | Os09g0463300 | - | Detail |
| C1H9g27922 | 9:14,462,626-14,463,366 | + | C2H8g04634 | CX8g053678 | LOC_Os09g28880 | Os09g0463600 | - | Detail |
| C1H9g22383 | 9:14,469,635-14,470,756 | + | - | CX8g050532 | LOC_Os09g28890 | Os09g0463700 | - | Detail |
| C1H9g29908 | 9:14,477,978-14,478,205 | + | C2H9g06208 | CX9g058102 | LOC_Os09g28900 | Os09g0463900 | - | Detail |
| C1H9g13495 | 9:14,479,436-14,479,918 | + | C2H9g06208 | CX9g055813 | LOC_Os09g28900 | Os09g0410700 | - | Detail |
| C1H9g11908 | 9:14,481,560-14,486,123 | - | C2H9g27359 | CX9g057340 | LOC_Os09g28910 | Os09g0464000 | - | Detail |
| C1H9g03015 | 9:14,485,149-14,486,023 | + | - | - | - | Os09g0464066 | - | Detail |
| C1H9g26305 | 9:14,498,312-14,499,307 | - | C2H9g21979 | CX9g056952 | LOC_Os09g28930 | Os09g0464300 | - | Detail |
| C1H9g02656 | 9:14,510,601-14,518,761 | - | C2H9g10275 | CX9g056356 | LOC_Os09g28940 | Os09g0464400 | - | Detail |
| C1H9g11367 | 9:14,531,631-14,532,587 | - | C2H9g26296 | CX9g057742 | LOC_Os09g29050 | Os09g0465400 | - | Detail |
| C1H9g04483 | 9:14,534,358-14,537,056 | + | C2H9g25155 | CX9g057144 | LOC_Os09g29060 | Os09g0465500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g007016 | 1:33,065,554-33,066,270 | - | C1H1g05172 | - | LOC_Os01g64470 | Os01g0864500 | OsSDS1 | Detail |
| CX1g000270 | 1:33,070,633-33,076,078 | - | C1H1g09530 | C2H1g03532 | LOC_Os01g64490 | Os01g0864700 | - | Detail |
| CX1g005197 | 1:33,085,311-33,088,730 | - | C1H1g19766 | C2H1g19719 | LOC_Os01g64520 | Os01g0865100 | - | Detail |
| CX1g005842 | 1:33,101,507-33,102,901 | - | C1H1g06728 | C2H1g05127 | LOC_Os01g64540 | Os01g0865400 | - | Detail |
| CX1g000455 | 1:33,104,585-33,104,851 | - | - | - | - | - | - | Detail |
| CX1g002273 | 1:33,106,295-33,110,057 | - | - | C2H5g07853 | - | - | - | Detail |
| CX1g004450 | 1:33,120,358-33,125,403 | + | C1H1g22449 | C2H1g23075 | LOC_Os01g64560 | Os01g0865600 | - | Detail |
| CX1g006391 | 1:33,126,393-33,127,211 | - | C1H1g07142 | C2H1g15992 | LOC_Os01g64570 | Os01g0865700 | - | Detail |
| CX1g005395 | 1:33,135,156-33,136,911 | - | - | C2H1g27972 | - | Os01g0702900 | - | Detail |
| CX1g006607 | 1:33,139,478-33,140,440 | - | C1H1g19115 | C2H1g27008 | LOC_Os01g64590 | Os01g0865800 | - | Detail |
| CX1g006898 | 1:33,154,019-33,154,657 | + | C1H1g24698 | C2H1g08171 | LOC_Os01g64620 | Os01g0866000 | - | Detail |
| CX1g000712 | 1:33,158,109-33,158,552 | + | - | - | - | - | - | Detail |
| CX1g006788 | 1:33,168,376-33,170,284 | + | C1H1g21443 | C2H1g14468 | LOC_Os01g64630 | Os01g0964133 | - | Detail |
| CX1g002061 | 1:33,172,333-33,180,243 | + | C1H1g19890 | C2H1g13692 | LOC_Os01g64660 | Os01g0866400 | OscFBP1, MOC2 | Detail |
| CX1g003440 | 1:33,180,694-33,183,136 | - | C1H1g06687 | C2H1g27654 | LOC_Os01g64670 | Os01g0866500 | - | Detail |
| CX1g000969 | 1:33,185,518-33,186,027 | - | C1H1g03251 | C2H1g02604 | LOC_Os01g64680 | Os01g0866600 | - | Detail |
| CX1g003378 | 1:33,187,324-33,188,728 | - | C1H1g20073 | C2H1g04946 | LOC_Os01g64690 | Os01g0866700 | - | Detail |
| CX1g004424 | 1:33,199,329-33,201,144 | + | C1H1g10677 | C2H1g24433 | LOC_Os01g64700 | Os01g0866800 | - | Detail |
| CX1g005582 | 1:33,205,340-33,212,581 | + | C1H1g07172 | C2H1g21915 | - | Os01g0867100 | - | Detail |
| CX1g006694 | 1:33,213,857-33,217,761 | + | C1H1g15015 | C2H1g21118 | LOC_Os01g64720 | Os01g0867200 | - | Detail |