| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g19519 | 5:3,806,535-3,807,523 | + | C1H5g05273 | CX5g039762 | LOC_Os05g08530 | Os05g0178000 | - | Detail |
| C2H5g08820 | 5:3,810,342-3,811,410 | - | C1H5g26746 | CX5g040319 | LOC_Os05g08540 | Os05g0178100 | GA3OX1, OsGA3ox1, GA3ox1, OsGA3OX1 | Detail |
| C2H5g24682 | 5:3,811,471-3,812,055 | - | C1H5g15273 | CX5g040319 | LOC_Os05g08540 | Os05g0178100 | GA3OX1, OsGA3ox1, GA3ox1, OsGA3OX1 | Detail |
| C2H5g23593 | 5:3,812,886-3,813,561 | - | C1H5g24081 | CX5g038579 | LOC_Os05g08550 | - | - | Detail |
| C2H5g22086 | 5:3,814,422-3,816,906 | - | C1H5g18416 | CX5g037926 | LOC_Os05g08554 | Os05g0178300 | - | Detail |
| C2H5g19576 | 5:3,818,245-3,821,564 | - | C1H5g28500 | CX5g037936 | LOC_Os05g08560 | Os05g0178400 | - | Detail |
| C2H5g23931 | 5:3,828,656-3,831,151 | - | C1H5g30909 | CX5g039091 | LOC_Os05g08570 | Os05g0178600 | - | Detail |
| C2H5g20930 | 5:3,831,186-3,831,443 | - | C1H5g11220 | CX5g038646 | - | Os05g0178600 | - | Detail |
| C2H5g20358 | 5:3,851,213-3,855,100 | + | C1H5g28275 | CX5g038400 | LOC_Os05g08600 | Os05g0178900 | - | Detail |
| C2H5g18108 | 5:3,857,538-3,861,896 | + | C1H5g03795 | CX5g039771 | LOC_Os05g08610 | Os05g0179000 | - | Detail |
| C2H5g28488 | 5:3,873,219-3,873,671 | + | C1H5g15516 | - | LOC_Os08g23900 | - | - | Detail |
| C2H5g17102 | 5:3,895,817-3,897,238 | - | C1H5g19959 | CX5g037983 | LOC_Os05g08640 | Os05g0179300 | - | Detail |
| C2H5g23753 | 5:3,923,426-3,926,532 | + | C1H5g21520 | CX5g039721 | LOC_Os05g08730 | Os05g0179800 | - | Detail |
| C2H5g25802 | 5:3,966,183-3,969,681 | - | C1H5g27830 | CX5g038350 | LOC_Os05g08790 | Os05g0180400 | - | Detail |
| C2H5g06685 | 5:3,970,612-3,973,529 | - | C1H5g02747 | CX5g037875 | LOC_Os05g08800 | Os05g0180500 | - | Detail |
| C2H5g05984 | 5:3,988,380-3,998,378 | - | C1H5g20076 | CX5g036876 | LOC_Os05g08810 | Os05g0180600 | - | Detail |
| C2H5g03050 | 5:3,999,805-4,000,905 | + | C1H5g03323 | CX5g037205 | LOC_Os05g08820 | Os05g0180700 | - | Detail |
| C2H5g11956 | 5:4,009,266-4,015,221 | + | C1H5g21276 | CX5g037851 | LOC_Os05g08840 | Os05g0181000 | - | Detail |
| C2H5g06572 | 5:4,019,186-4,020,189 | - | C1H5g29149 | CX5g037202 | LOC_Os05g08854 | Os05g0181250 | - | Detail |
| C2H5g00592 | 5:4,027,481-4,027,732 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005495 | 1:32,949,524-32,950,414 | + | C1H1g27341 | C2H1g17934 | LOC_Os01g64110 | Os01g0860500 | - | Detail |
| CX1g006506 | 1:32,951,496-32,951,979 | + | C1H1g11659 | C2H5g23800 | LOC_Os01g64120 | Os01g0860601 | - | Detail |
| CX1g004023 | 1:32,958,763-32,961,210 | + | C1H1g21642 | C2H1g02020 | LOC_Os01g71830 | Os01g0860800 | - | Detail |
| CX1g001565 | 1:32,964,213-32,965,124 | - | C1H1g02555 | C2H1g24709 | LOC_Os01g64180 | Os01g0860900 | - | Detail |
| CX1g002354 | 1:32,968,052-32,968,441 | - | C1H1g11287 | - | LOC_Os01g64190 | Os01g0861000 | - | Detail |
| CX1g001303 | 1:32,971,512-32,975,504 | + | C1H1g19645 | C2H1g12898 | LOC_Os01g64250 | Os01g0861700 | - | Detail |
| CX1g000394 | 1:32,976,231-32,977,914 | - | C1H1g02871 | C2H1g16354 | LOC_Os01g64256 | Os01g0861900 | - | Detail |
| CX1g004610 | 1:32,978,820-32,981,084 | - | C1H1g27132 | C2H1g00349 | LOC_Os01g64262 | Os01g0862000 | - | Detail |
| CX1g005876 | 1:32,981,584-32,982,328 | + | C1H1g31062 | C2H1g29651 | LOC_Os01g64270 | Os01g0862200 | - | Detail |
| CX1g004635 | 1:32,982,681-32,986,363 | - | C1H1g18011 | C2H1g22939 | LOC_Os01g64280 | Os01g0862300 | - | Detail |
| CX1g000182 | 1:32,988,112-32,988,969 | + | C1H1g00634 | C2H1g16377 | LOC_Os01g64300 | Os01g0862600 | OsS40-9 | Detail |
| CX1g005937 | 1:33,000,672-33,002,008 | + | C1H1g25790 | C2H1g26579 | LOC_Os01g64310 | Os01g0862800 | ENAC1, NAC59 | Detail |
| CX1g004571 | 1:33,014,681-33,015,453 | + | C1H1g31779 | C2H1g23575 | LOC_Os01g64360 | Os01g0863300 | - | Detail |
| CX1g002878 | 1:33,016,772-33,019,641 | - | C1H1g18221 | C2H1g20445 | LOC_Os01g64370 | Os01g0863400 | - | Detail |
| CX1g002036 | 1:33,021,997-33,022,386 | + | C1H1g03594 | C2H1g29837 | - | Os01g0863500 | REL1 | Detail |
| CX1g002788 | 1:33,033,589-33,034,320 | + | C1H1g02485 | - | LOC_Os01g64410 | Os01g0863800 | - | Detail |
| CX1g007094 | 1:33,048,125-33,048,817 | - | C1H1g04807 | - | LOC_Os01g64430 | Os01g0864000 | OsOFP8 | Detail |
| CX1g002891 | 1:33,054,490-33,054,945 | + | C1H1g24366 | - | LOC_Os01g64440 | Os01g0864200 | - | Detail |
| CX1g000816 | 1:33,058,885-33,059,601 | - | C1H1g22559 | - | LOC_Os01g64450 | Os01g0864300 | - | Detail |
| CX1g002803 | 1:33,064,615-33,064,767 | + | - | C2H6g20372 | LOC_Os05g42448 | Os11g0631825 | - | Detail |