| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g17037 | 6:25,998,476-25,999,487 | - | C2H6g17976 | CX6g043522 | LOC_Os06g49200 | Os06g0705500 | - | Detail |
| C1H6g06789 | 6:26,004,128-26,006,272 | + | C2H6g01709 | CX6g042299 | LOC_Os06g49210 | Os06g0705600 | - | Detail |
| C1H6g02632 | 6:26,010,222-26,012,560 | + | C2H6g20644 | CX6g045693 | LOC_Os06g49220 | Os06g0705700 | - | Detail |
| C1H6g03967 | 6:26,014,401-26,016,334 | + | C2H6g02964 | CX6g045693 | LOC_Os06g49230 | Os06g0706100 | - | Detail |
| C1H6g24113 | 6:26,016,399-26,017,202 | + | C2H6g07764 | CX6g045693 | LOC_Os06g49240 | Os06g0706100 | - | Detail |
| C1H6g07579 | 6:26,020,059-26,024,374 | + | C2H6g16936 | CX6g044738 | LOC_Os06g49250 | Os06g0706400 | OsPTR9 | Detail |
| C1H6g06492 | 6:26,028,504-26,032,588 | - | C2H6g22144 | CX6g043317 | LOC_Os06g49260 | Os06g0706600 | - | Detail |
| C1H6g17051 | 6:26,034,592-26,034,936 | - | - | CX6g045688 | LOC_Os06g49290 | Os06g0706700 | - | Detail |
| C1H6g14791 | 6:26,035,770-26,037,647 | - | C2H6g07496 | CX6g045701 | LOC_Os06g49300 | Os06g0707000 | XYXT1 | Detail |
| C1H6g07781 | 6:26,040,509-26,047,709 | + | C2H6g02584 | CX6g042851 | LOC_Os06g49310 | Os06g0707100 | - | Detail |
| C1H6g30332 | 6:26,047,531-26,049,525 | - | C2H6g28355 | CX6g044744 | LOC_Os06g49320 | Os06g0707200 | OsXAT4 | Detail |
| C1H6g13202 | 6:26,052,332-26,053,759 | - | - | CX6g043747 | LOC_Os06g49340 | Os06g0707300 | - | Detail |
| C1H6g20503 | 6:26,057,382-26,063,792 | - | C2H6g09646 | CX6g043432 | LOC_Os06g49360 | Os06g0707400 | - | Detail |
| C1H6g28571 | 6:26,074,403-26,078,854 | - | C2H6g12364 | CX6g043180 | LOC_Os06g49420 | Os06g0707700 | - | Detail |
| C1H6g18704 | 6:26,079,665-26,081,103 | - | C2H6g06456 | - | - | - | - | Detail |
| C1H6g17358 | 6:26,082,804-26,087,763 | + | C2H6g06263 | CX6g042732 | LOC_Os06g49430 | Os06g0708000 | BWMK1, OsBWMK1M | Detail |
| C1H6g07108 | 6:26,088,827-26,093,715 | - | C2H6g00786 | CX6g043918 | LOC_Os06g49440 | Os06g0708100 | - | Detail |
| C1H6g25506 | 6:26,094,009-26,100,445 | + | C2H6g22817 | CX6g041443 | LOC_Os06g49450 | Os06g0708200 | OsMTOPVIB | Detail |
| C1H6g16157 | 6:26,101,107-26,103,018 | + | C2H6g13876 | CX6g042713 | LOC_Os06g49460 | Os06g0708300 | - | Detail |
| C1H6g26774 | 6:26,103,935-26,105,851 | + | C2H6g01779 | CX6g043935 | LOC_Os06g49470 | Os06g0708400 | CYP19-4, OsCYP19-4, OsCYP-16, OsCYP19-3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005495 | 1:32,949,524-32,950,414 | + | C1H1g27341 | C2H1g17934 | LOC_Os01g64110 | Os01g0860500 | - | Detail |
| CX1g006506 | 1:32,951,496-32,951,979 | + | C1H1g11659 | C2H5g23800 | LOC_Os01g64120 | Os01g0860601 | - | Detail |
| CX1g004023 | 1:32,958,763-32,961,210 | + | C1H1g21642 | C2H1g02020 | LOC_Os01g71830 | Os01g0860800 | - | Detail |
| CX1g001565 | 1:32,964,213-32,965,124 | - | C1H1g02555 | C2H1g24709 | LOC_Os01g64180 | Os01g0860900 | - | Detail |
| CX1g002354 | 1:32,968,052-32,968,441 | - | C1H1g11287 | - | LOC_Os01g64190 | Os01g0861000 | - | Detail |
| CX1g001303 | 1:32,971,512-32,975,504 | + | C1H1g19645 | C2H1g12898 | LOC_Os01g64250 | Os01g0861700 | - | Detail |
| CX1g000394 | 1:32,976,231-32,977,914 | - | C1H1g02871 | C2H1g16354 | LOC_Os01g64256 | Os01g0861900 | - | Detail |
| CX1g004610 | 1:32,978,820-32,981,084 | - | C1H1g27132 | C2H1g00349 | LOC_Os01g64262 | Os01g0862000 | - | Detail |
| CX1g005876 | 1:32,981,584-32,982,328 | + | C1H1g31062 | C2H1g29651 | LOC_Os01g64270 | Os01g0862200 | - | Detail |
| CX1g004635 | 1:32,982,681-32,986,363 | - | C1H1g18011 | C2H1g22939 | LOC_Os01g64280 | Os01g0862300 | - | Detail |
| CX1g000182 | 1:32,988,112-32,988,969 | + | C1H1g00634 | C2H1g16377 | LOC_Os01g64300 | Os01g0862600 | OsS40-9 | Detail |
| CX1g005937 | 1:33,000,672-33,002,008 | + | C1H1g25790 | C2H1g26579 | LOC_Os01g64310 | Os01g0862800 | ENAC1, NAC59 | Detail |
| CX1g004571 | 1:33,014,681-33,015,453 | + | C1H1g31779 | C2H1g23575 | LOC_Os01g64360 | Os01g0863300 | - | Detail |
| CX1g002878 | 1:33,016,772-33,019,641 | - | C1H1g18221 | C2H1g20445 | LOC_Os01g64370 | Os01g0863400 | - | Detail |
| CX1g002036 | 1:33,021,997-33,022,386 | + | C1H1g03594 | C2H1g29837 | - | Os01g0863500 | REL1 | Detail |
| CX1g002788 | 1:33,033,589-33,034,320 | + | C1H1g02485 | - | LOC_Os01g64410 | Os01g0863800 | - | Detail |
| CX1g007094 | 1:33,048,125-33,048,817 | - | C1H1g04807 | - | LOC_Os01g64430 | Os01g0864000 | OsOFP8 | Detail |
| CX1g002891 | 1:33,054,490-33,054,945 | + | C1H1g24366 | - | LOC_Os01g64440 | Os01g0864200 | - | Detail |
| CX1g000816 | 1:33,058,885-33,059,601 | - | C1H1g22559 | - | LOC_Os01g64450 | Os01g0864300 | - | Detail |
| CX1g002803 | 1:33,064,615-33,064,767 | + | - | C2H6g20372 | LOC_Os05g42448 | Os11g0631825 | - | Detail |