| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g09292 | 1:7,364,019-7,365,283 | - | C1H1g26795 | CX1g001877 | LOC_Os01g14530 | Os01g0247900 | - | Detail |
| C2H1g08885 | 1:7,371,729-7,372,145 | - | - | CX1g000772 | LOC_Os01g14540 | Os01g0248000 | - | Detail |
| C2H1g24520 | 1:7,376,595-7,377,973 | + | C1H1g21898 | CX1g004504 | LOC_Os01g14550 | Os01g0248300 | - | Detail |
| C2H1g04847 | 1:7,381,890-7,386,786 | + | C1H1g31848 | CX1g005900 | LOC_Os01g14580 | Os01g0248400 | - | Detail |
| C2H1g17700 | 1:7,386,839-7,388,513 | - | C1H1g11752 | CX1g001958 | LOC_Os01g14590 | Os01g0248500 | - | Detail |
| C2H1g17259 | 1:7,390,127-7,392,577 | - | C1H1g16786 | CX1g002738 | LOC_Os01g14610 | Os01g0248600 | - | Detail |
| C2H1g29985 | 1:7,400,724-7,401,854 | + | - | CX1g003760 | LOC_Os01g14630 | Os01g0248701 | OsGPPS | Detail |
| C2H1g15115 | 1:7,404,324-7,404,965 | + | C1H1g18998 | - | LOC_Os01g14640 | Os01g0248800 | - | Detail |
| C2H1g16845 | 1:7,407,092-7,407,968 | - | C1H1g01215 | CX1g002096 | LOC_Os01g14650 | Os01g0248900 | EXPA8, OsEXPA8, OsEXP8, osaEXPa1.17 | Detail |
| C2H1g12724 | 1:7,411,548-7,412,410 | - | C1H1g04124 | CX1g004154 | LOC_Os01g14660 | Os01g0249100 | - | Detail |
| C2H1g16042 | 1:7,413,403-7,416,260 | - | C1H1g17472 | CX1g002599 | LOC_Os01g14670 | Os01g0249200 | - | Detail |
| C2H1g16396 | 1:7,421,803-7,424,432 | - | C1H1g11195 | CX1g002390 | LOC_Os01g14690 | Os01g0249300 | - | Detail |
| C2H1g21718 | 1:7,442,230-7,442,782 | + | C1H1g03890 | - | LOC_Os01g14700 | Os01g0249700 | - | Detail |
| C2H1g07815 | 1:7,445,892-7,446,812 | + | C1H1g07694 | - | LOC_Os01g14700 | Os01g0249800 | - | Detail |
| C2H1g09557 | 1:7,447,840-7,449,009 | - | - | CX1g001638 | LOC_Os01g14720 | Os01g0249900 | - | Detail |
| C2H1g05910 | 1:7,479,422-7,479,886 | + | C1H1g15730 | CX1g002492 | LOC_Os01g14760 | Os01g0250200 | - | Detail |
| C2H1g22193 | 1:7,488,586-7,488,989 | + | C1H1g13841 | CX1g001802 | LOC_Os01g14790 | Os01g0250600 | - | Detail |
| C2H1g16588 | 1:7,493,310-7,501,798 | + | C1H1g29369 | CX1g002364 | LOC_Os01g14810 | Os01g0250900 | - | Detail |
| C2H1g02998 | 1:7,502,245-7,506,406 | + | C1H1g07075 | CX1g003516 | LOC_Os01g14820 | Os01g0251000 | - | Detail |
| C2H1g23142 | 1:7,507,746-7,511,805 | + | C1H1g01846 | CX1g002093 | LOC_Os01g14830 | Os01g0251100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006740 | 1:3,030,054-3,033,088 | + | C1H1g12621 | C2H1g01297 | LOC_Os01g07400 | Os01g0168500 | - | Detail |
| CX1g006052 | 1:3,035,098-3,038,180 | + | C1H1g18695 | C2H1g01134 | LOC_Os01g07410 | Os01g0168600 | - | Detail |
| CX1g002240 | 1:3,040,489-3,042,566 | - | C1H1g22702 | C2H1g21723 | LOC_Os01g07420 | Os01g0168800 | - | Detail |
| CX1g002348 | 1:3,044,332-3,045,371 | - | C1H1g30123 | C2H1g02664 | LOC_Os01g07430 | Os01g0169100 | Os2R_MYB3 | Detail |
| CX1g001103 | 1:3,055,101-3,056,021 | + | C1H1g30123 | C2H1g02664 | LOC_Os01g07450 | Os01g0169100 | Os2R_MYB3 | Detail |
| CX1g004682 | 1:3,074,407-3,075,165 | - | - | C2H1g04358 | LOC_Os01g07480 | Os01g0169400 | - | Detail |
| CX1g003594 | 1:3,083,463-3,098,122 | - | C1H1g15062 | C2H1g17287 | LOC_Os01g07490 | Os01g0169500 | - | Detail |
| CX1g003939 | 1:3,099,782-3,104,092 | - | C1H1g17469 | C2H1g13966 | LOC_Os01g07500 | Os01g0169800 | FIB, fib | Detail |
| CX1g005321 | 1:3,110,755-3,111,393 | + | C1H9g18306 | C2H1g25920 | LOC_Os02g58420 | - | - | Detail |
| CX1g002044 | 1:3,124,548-3,127,955 | - | C1H1g17887 | C2H1g18505 | LOC_Os01g07520 | Os01g0169900 | - | Detail |
| CX1g001973 | 1:3,129,605-3,132,968 | - | C1H1g06478 | C2H1g07559 | LOC_Os01g07530 | Os01g0170000 | - | Detail |
| CX1g006120 | 1:3,142,023-3,145,550 | + | C1H1g14550 | C2H1g19408 | LOC_Os01g07540 | Os01g0170100 | - | Detail |
| CX1g001387 | 1:3,151,492-3,151,650 | - | - | - | - | - | - | Detail |
| CX1g002596 | 1:3,152,616-3,156,117 | + | C1H1g09374 | C2H1g12386 | LOC_Os01g07560 | Os01g0170300 | - | Detail |
| CX1g002169 | 1:3,161,491-3,166,937 | - | C1H1g15607 | C2H1g26052 | LOC_Os01g07570 | Os01g0170500 | - | Detail |
| CX1g005563 | 1:3,172,658-3,175,238 | + | C1H1g29516 | C2H1g23567 | LOC_Os01g07590 | Os01g0170600 | - | Detail |
| CX1g006498 | 1:3,176,314-3,177,480 | + | C1H1g03810 | C2H1g19388 | LOC_Os01g07590 | Os01g0303800 | - | Detail |
| CX1g001258 | 1:3,179,155-3,182,522 | + | C1H1g30649 | C2H1g10083 | LOC_Os01g07600 | Os01g0170700 | - | Detail |
| CX1g004074 | 1:3,184,877-3,187,764 | - | C1H1g25276 | C2H1g27664 | LOC_Os01g16740 | - | - | Detail |
| CX1g004971 | 1:3,191,859-3,193,610 | + | C1H1g00996 | C2H1g28231 | LOC_Os01g07610 | Os01g0170800 | - | Detail |