| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g30036 | 6:3,511,053-3,511,337 | - | C2H6g25998 | - | - | - | - | Detail |
| C1H6g29216 | 6:3,527,106-3,532,441 | + | C2H6g28335 | CX6g043481 | LOC_Os06g08440 | Os06g0183100 | ORR2, ORR2, B-type RR | Detail |
| C1H6g11123 | 6:3,532,648-3,539,976 | - | C2H6g18941 | CX6g041664 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C1H6g00515 | 6:3,550,436-3,550,870 | - | C2H6g26636 | CX6g043120 | LOC_Os06g08470 | Os06g0183700 | - | Detail |
| C1H6g09185 | 6:3,551,151-3,567,893 | - | C2H6g26382 | CX6g043183 | LOC_Os06g08480 | Os06g0183800 | OsCHR702, CHR702 | Detail |
| C1H6g27595 | 6:3,576,413-3,578,627 | - | C2H6g18991 | CX6g041255 | LOC_Os06g08500 | Os06g0184000 | OsRHL1 | Detail |
| C1H6g21452 | 6:3,584,546-3,586,451 | - | C2H6g17059 | CX6g045254 | LOC_Os06g08510 | Os06g0184100 | DPL2 | Detail |
| C1H6g01823 | 6:3,589,061-3,590,512 | - | C2H6g17339 | CX6g043502 | LOC_Os06g08520 | Os06g0184200 | - | Detail |
| C1H6g09856 | 6:3,598,244-3,603,345 | - | C2H6g05817 | CX6g045722 | LOC_Os06g08530 | Os06g0184300 | - | Detail |
| C1H6g07584 | 6:3,608,593-3,612,106 | + | C2H6g11053 | CX6g042782 | LOC_Os06g08540 | Os06g0184400 | - | Detail |
| C1H6g06067 | 6:3,613,742-3,617,783 | - | C2H6g09876 | CX6g042952 | LOC_Os06g08550 | Os06g0184500 | OsNPY2 | Detail |
| C1H6g31361 | 6:3,635,848-3,650,218 | + | C2H6g29520 | CX6g044915 | LOC_Os06g08560 | Os06g0184700 | - | Detail |
| C1H6g00502 | 6:3,650,602-3,650,934 | - | C2H6g08005 | CX6g045857 | LOC_Os06g08564 | Os06g0184800 | - | Detail |
| C1H6g26124 | 6:3,652,356-3,653,199 | - | C2H6g00968 | CX6g045857 | - | - | - | Detail |
| C1H6g31492 | 6:3,674,636-3,675,946 | + | C2H6g18987 | CX6g042282 | LOC_Os06g08610 | Os06g0185300 | - | Detail |
| C1H6g28072 | 6:3,711,927-3,715,238 | + | C2H6g15407 | CX6g041869 | LOC_Os06g08670 | Os06g0185900 | - | Detail |
| C1H6g05075 | 6:3,717,143-3,721,670 | + | C2H6g04610 | CX6g044236 | LOC_Os06g08680 | Os06g0186000 | - | Detail |
| C1H6g00841 | 6:3,723,023-3,726,340 | - | C2H6g29401 | CX6g042059 | LOC_Os06g08690 | Os06g0186100 | - | Detail |
| C1H6g04589 | 6:3,730,841-3,734,332 | - | C2H6g15979 | CX6g044426 | LOC_Os06g08710 | Os06g0186300 | - | Detail |
| C1H6g03621 | 6:3,738,757-3,744,414 | - | C2H6g07175 | CX6g043949 | LOC_Os06g08720 | Os06g0186400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003863 | 1:32,803,122-32,805,836 | - | C1H1g06965 | C2H1g17156 | LOC_Os01g63880 | Os01g0857600 | - | Detail |
| CX1g006509 | 1:32,806,885-32,808,343 | - | C1H1g13629 | C2H1g15658 | LOC_Os01g63890 | Os01g0857700 | - | Detail |
| CX1g005654 | 1:32,810,936-32,813,936 | + | C1H1g08232 | C2H1g17537 | LOC_Os01g63900 | Os01g0857900 | - | Detail |
| CX1g006214 | 1:32,814,986-32,823,959 | - | C1H1g10820 | C2H1g23501 | LOC_Os01g63910 | Os01g0858000 | - | Detail |
| CX1g000674 | 1:32,824,060-32,824,611 | + | C1H1g24013 | C2H1g19886 | - | Os01g0857950 | - | Detail |
| CX1g006419 | 1:32,825,247-32,825,489 | + | C1H1g04411 | - | - | - | - | Detail |
| CX1g002651 | 1:32,832,573-32,834,147 | - | C1H1g11622 | C2H1g05023 | LOC_Os01g63930 | Os01g0858350 | CYP94C3, OsCYP94C3 | Detail |
| CX1g000861 | 1:32,854,675-32,859,007 | - | C1H1g19240 | C2H1g21815 | LOC_Os01g63940 | Os01g0858500 | - | Detail |
| CX1g002065 | 1:32,859,136-32,861,899 | + | C1H1g11881 | C2H1g10761 | LOC_Os01g63950 | Os01g0858700 | - | Detail |
| CX1g003548 | 1:32,866,143-32,867,324 | + | C1H1g12957 | - | LOC_Os01g63970 | Os01g0858900 | OsSTLP1 | Detail |
| CX1g000686 | 1:32,886,077-32,887,670 | - | C1H1g07095 | C2H1g26799 | LOC_Os01g63980 | Os01g0859100 | - | Detail |
| CX1g004503 | 1:32,892,024-32,892,901 | - | C1H1g01041 | C2H1g00597 | - | Os01g0647800 | - | Detail |
| CX1g007023 | 1:32,902,421-32,903,810 | + | C1H1g07510 | C2H1g28544 | LOC_Os01g63990 | Os01g0859200 | - | Detail |
| CX1g006726 | 1:32,917,662-32,919,175 | + | C1H1g06758 | C2H1g03211 | LOC_Os01g64000 | Os01g0859300 | OsABI5-1, OsABI5 | Detail |
| CX1g001047 | 1:32,921,359-32,922,689 | + | C1H1g16825 | C2H1g21542 | LOC_Os01g64010 | Os01g0859400 | - | Detail |
| CX1g003099 | 1:32,925,016-32,930,739 | - | C1H1g23015 | C2H1g11632 | LOC_Os01g64020 | Os01g0859500 | OsLG2, rLG2 | Detail |
| CX1g001451 | 1:32,937,837-32,938,187 | + | - | - | - | - | - | Detail |
| CX1g006229 | 1:32,939,450-32,940,703 | - | C1H1g00249 | - | LOC_Os01g64030 | Os01g0859600 | - | Detail |
| CX1g006927 | 1:32,941,802-32,944,430 | + | C1H1g07034 | C2H1g13590 | LOC_Os01g64090 | Os01g0860300 | - | Detail |
| CX1g003532 | 1:32,945,620-32,946,596 | + | C1H1g27202 | C2H1g12147 | LOC_Os01g64100 | Os01g0860400 | - | Detail |