| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g27690 | 5:15,136,997-15,141,711 | - | C1H5g31068 | CX5g038850 | LOC_Os05g30990 | Os05g0373500 | - | Detail |
| C2H5g08611 | 5:15,148,017-15,149,620 | + | C1H5g09200 | CX5g039863 | LOC_Os05g31000 | Os05g0373700 | - | Detail |
| C2H5g08322 | 5:15,152,862-15,153,535 | + | - | CX5g037088 | - | - | - | Detail |
| C2H5g03401 | 5:15,156,395-15,160,312 | + | C1H5g04117 | - | - | - | - | Detail |
| C2H5g30069 | 5:15,172,573-15,174,488 | + | C1H5g20196 | CX5g039645 | LOC_Os05g31040 | Os05g0374200 | OsCKX9 | Detail |
| C2H5g03570 | 5:15,182,755-15,193,593 | + | C1H5g11987 | CX5g037517 | LOC_Os05g31056 | Os05g0374600 | - | Detail |
| C2H5g20713 | 5:15,206,795-15,212,652 | - | C1H5g22476 | CX5g039341 | LOC_Os05g31110 | Os05g0375100 | OsHXK10 | Detail |
| C2H5g21390 | 5:15,229,464-15,234,183 | - | C1H5g21966 | CX5g036757 | LOC_Os05g31140 | Os05g0375400 | OsEGL1 | Detail |
| C2H5g07216 | 5:15,250,256-15,253,292 | + | C1H5g26423 | CX5g038239 | LOC_Os05g31160 | Os05g0375600 | - | Detail |
| C2H5g06087 | 5:15,264,778-15,271,729 | - | C1H5g20894 | CX5g039310 | LOC_Os05g31200 | Os05g0376000 | - | Detail |
| C2H5g11462 | 5:15,274,481-15,280,927 | - | C1H5g02831 | CX5g038768 | LOC_Os05g31254 | Os05g0376600 | - | Detail |
| C2H5g10157 | 5:15,282,591-15,283,338 | - | C1H5g06568 | CX5g038571 | LOC_Os05g31280 | Os05g0376800 | - | Detail |
| C2H5g00006 | 5:15,289,492-15,291,656 | - | C1H5g12763 | CX5g040067 | LOC_Os05g31290 | Os05g0377000 | - | Detail |
| C2H5g17233 | 5:15,309,088-15,309,231 | + | C1H5g27622 | - | LOC_Os05g31370 | - | - | Detail |
| C2H5g14904 | 5:15,312,599-15,314,227 | + | C1H5g14584 | CX5g040971 | LOC_Os05g31380 | Os05g0378200 | - | Detail |
| C2H5g05514 | 5:15,362,084-15,364,022 | - | C1H5g26766 | CX5g037505 | LOC_Os05g31470 | - | - | Detail |
| C2H5g07919 | 5:15,370,826-15,375,815 | - | C1H5g21416 | CX5g040361 | LOC_Os05g31480 | Os05g0378800 | - | Detail |
| C2H5g27417 | 5:15,376,344-15,381,134 | - | C1H5g03148 | CX5g038969 | LOC_Os05g31490 | Os05g0378900 | - | Detail |
| C2H5g25052 | 5:15,391,008-15,392,979 | - | C1H5g20720 | - | - | - | - | Detail |
| C2H5g30556 | 5:15,405,504-15,409,808 | + | C1H5g06063 | CX5g040570 | LOC_Os05g31610 | Os05g0380800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003216 | 1:32,497,721-32,499,625 | - | C1H1g19302 | C2H1g01345 | LOC_Os01g63240 | Os01g0851300 | - | Detail |
| CX1g000616 | 1:32,502,563-32,506,672 | - | C1H1g13651 | C2H1g07756 | LOC_Os01g63250 | Os01g0851400 | - | Detail |
| CX1g001829 | 1:32,514,105-32,514,923 | + | C1H1g24777 | - | LOC_Os01g63260 | Os01g0851600 | - | Detail |
| CX1g001220 | 1:32,517,453-32,523,240 | - | C1H1g15673 | C2H1g20633 | LOC_Os01g63270 | Os01g0851700 | - | Detail |
| CX1g001145 | 1:32,529,398-32,532,462 | - | C1H1g03471 | C2H1g02734 | LOC_Os01g63280 | Os01g0852100 | - | Detail |
| CX1g001502 | 1:32,533,698-32,536,815 | - | C1H1g05192 | C2H1g20941 | LOC_Os01g63290 | Os01g0852200 | OsPHT4;3 | Detail |
| CX1g001088 | 1:32,543,145-32,543,639 | + | - | - | - | - | - | Detail |
| CX1g000657 | 1:32,547,129-32,549,075 | - | C1H1g11391 | - | LOC_Os01g63310 | Os01g0852400 | OsOPL1 | Detail |
| CX1g004870 | 1:32,556,337-32,556,573 | - | - | - | - | - | - | Detail |
| CX1g006459 | 1:32,557,189-32,561,970 | - | C1H1g31702 | C2H1g02458 | LOC_Os01g63354 | Os01g0852500 | - | Detail |
| CX1g005825 | 1:32,569,168-32,571,279 | + | C1H1g31372 | C2H1g22636 | LOC_Os01g63400 | Os01g0852900 | - | Detail |
| CX1g001333 | 1:32,572,626-32,573,481 | - | C1H1g22680 | C2H1g00294 | LOC_Os01g63410 | Os01g0853000 | - | Detail |
| CX1g006014 | 1:32,575,167-32,575,508 | + | C1H1g18063 | - | - | - | - | Detail |
| CX1g004784 | 1:32,584,983-32,587,996 | + | C1H1g21861 | C2H1g03435 | LOC_Os01g63420 | Os01g0853400 | OsCOI1a, OsCOI1, Os_F0728 | Detail |
| CX1g005287 | 1:32,596,091-32,596,517 | + | C1H1g01084 | C2H1g21411 | - | - | - | Detail |
| CX1g001449 | 1:32,599,397-32,600,412 | - | C1H1g22221 | C2H1g02642 | LOC_Os01g63460 | Os01g0853700 | - | Detail |
| CX1g000120 | 1:32,605,931-32,606,809 | + | C1H1g01372 | - | LOC_Os01g63470 | Os01g0853800 | - | Detail |
| CX1g000832 | 1:32,626,769-32,628,193 | + | C1H1g16925 | C2H1g09893 | LOC_Os01g63480 | Os01g0854000 | - | Detail |
| CX1g002836 | 1:32,634,715-32,634,864 | + | - | - | - | - | - | Detail |
| CX1g007164 | 1:32,637,684-32,638,100 | + | C1H1g13840 | - | LOC_Os01g63500 | Os01g0854400 | - | Detail |