| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g00232 | 1:1,609,125-1,609,574 | - | C2H1g10047 | CX1g002909 | LOC_Os01g04360 | Os01g0136000 | OsHSP16.9C | Detail |
| C1H1g20613 | 1:1,614,373-1,614,825 | - | C2H1g25836 | CX1g002909 | LOC_Os01g04370 | Os01g0136100 | OsHsp16.9A | Detail |
| C1H1g21666 | 1:1,624,685-1,625,971 | - | C2H1g20283 | CX1g001507 | LOC_Os01g04409 | Os01g0136400 | - | Detail |
| C1H1g31675 | 1:1,625,974-1,628,434 | - | C2H1g05664 | CX1g001507 | LOC_Os01g04490 | Os01g0137282 | - | Detail |
| C1H1g15521 | 1:1,628,796-1,629,566 | - | C2H1g28040 | CX1g000380 | LOC_Os01g04480 | Os01g0136450 | - | Detail |
| C1H1g03585 | 1:1,630,063-1,632,084 | - | C2H1g23051 | CX1g000380 | LOC_Os01g04530 | Os01g0136500 | - | Detail |
| C1H1g05135 | 1:1,634,865-1,635,695 | - | C2H1g27877 | CX1g000380 | LOC_Os01g04409 | Os01g0136400 | - | Detail |
| C1H1g14838 | 1:1,636,768-1,637,541 | - | C2H1g07350 | CX1g000380 | LOC_Os01g04430 | Os01g0136900 | - | Detail |
| C1H1g19619 | 1:1,640,636-1,644,159 | - | C2H1g17615 | CX1g000380 | LOC_Os01g04440 | Os01g0137700 | - | Detail |
| C1H1g04699 | 1:1,644,631-1,649,194 | - | C2H1g04457 | CX1g001507 | LOC_Os01g04450 | Os01g0136800 | - | Detail |
| C1H1g13476 | 1:1,651,079-1,653,101 | + | C2H1g03343 | CX1g004864 | LOC_Os01g04460 | Os01g0136900 | - | Detail |
| C1H1g03380 | 1:1,657,674-1,658,363 | + | C2H1g28040 | CX1g000380 | LOC_Os01g04470 | Os01g0137400 | - | Detail |
| C1H1g12367 | 1:1,663,244-1,663,916 | - | - | - | - | - | - | Detail |
| C1H1g13787 | 1:1,664,203-1,666,377 | + | C2H1g24458 | CX1g004882 | LOC_Os01g04550 | Os01g0137250 | - | Detail |
| C1H1g05966 | 1:1,667,350-1,671,776 | + | C2H1g15120 | CX1g001507 | LOC_Os01g04490 | Os01g0137282 | - | Detail |
| C1H1g04315 | 1:1,678,866-1,680,950 | + | C2H1g12949 | CX1g004864 | LOC_Os01g04520 | Os01g0137500 | - | Detail |
| C1H1g23883 | 1:1,683,991-1,684,707 | + | C2H1g23051 | CX1g000380 | LOC_Os01g04530 | Os01g0136500 | - | Detail |
| C1H1g29010 | 1:1,687,509-1,690,218 | + | C2H1g15120 | CX1g000582 | LOC_Os01g04550 | Os01g0137950 | - | Detail |
| C1H1g12602 | 1:1,698,232-1,701,717 | + | C2H1g04428 | CX1g004864 | LOC_Os01g04580 | Os01g0138400 | - | Detail |
| C1H1g28723 | 1:1,703,397-1,706,267 | + | C2H1g23235 | CX1g001331 | LOC_Os01g04590 | Os01g0138500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003216 | 1:32,497,721-32,499,625 | - | C1H1g19302 | C2H1g01345 | LOC_Os01g63240 | Os01g0851300 | - | Detail |
| CX1g000616 | 1:32,502,563-32,506,672 | - | C1H1g13651 | C2H1g07756 | LOC_Os01g63250 | Os01g0851400 | - | Detail |
| CX1g001829 | 1:32,514,105-32,514,923 | + | C1H1g24777 | - | LOC_Os01g63260 | Os01g0851600 | - | Detail |
| CX1g001220 | 1:32,517,453-32,523,240 | - | C1H1g15673 | C2H1g20633 | LOC_Os01g63270 | Os01g0851700 | - | Detail |
| CX1g001145 | 1:32,529,398-32,532,462 | - | C1H1g03471 | C2H1g02734 | LOC_Os01g63280 | Os01g0852100 | - | Detail |
| CX1g001502 | 1:32,533,698-32,536,815 | - | C1H1g05192 | C2H1g20941 | LOC_Os01g63290 | Os01g0852200 | OsPHT4;3 | Detail |
| CX1g001088 | 1:32,543,145-32,543,639 | + | - | - | - | - | - | Detail |
| CX1g000657 | 1:32,547,129-32,549,075 | - | C1H1g11391 | - | LOC_Os01g63310 | Os01g0852400 | OsOPL1 | Detail |
| CX1g004870 | 1:32,556,337-32,556,573 | - | - | - | - | - | - | Detail |
| CX1g006459 | 1:32,557,189-32,561,970 | - | C1H1g31702 | C2H1g02458 | LOC_Os01g63354 | Os01g0852500 | - | Detail |
| CX1g005825 | 1:32,569,168-32,571,279 | + | C1H1g31372 | C2H1g22636 | LOC_Os01g63400 | Os01g0852900 | - | Detail |
| CX1g001333 | 1:32,572,626-32,573,481 | - | C1H1g22680 | C2H1g00294 | LOC_Os01g63410 | Os01g0853000 | - | Detail |
| CX1g006014 | 1:32,575,167-32,575,508 | + | C1H1g18063 | - | - | - | - | Detail |
| CX1g004784 | 1:32,584,983-32,587,996 | + | C1H1g21861 | C2H1g03435 | LOC_Os01g63420 | Os01g0853400 | OsCOI1a, OsCOI1, Os_F0728 | Detail |
| CX1g005287 | 1:32,596,091-32,596,517 | + | C1H1g01084 | C2H1g21411 | - | - | - | Detail |
| CX1g001449 | 1:32,599,397-32,600,412 | - | C1H1g22221 | C2H1g02642 | LOC_Os01g63460 | Os01g0853700 | - | Detail |
| CX1g000120 | 1:32,605,931-32,606,809 | + | C1H1g01372 | - | LOC_Os01g63470 | Os01g0853800 | - | Detail |
| CX1g000832 | 1:32,626,769-32,628,193 | + | C1H1g16925 | C2H1g09893 | LOC_Os01g63480 | Os01g0854000 | - | Detail |
| CX1g002836 | 1:32,634,715-32,634,864 | + | - | - | - | - | - | Detail |
| CX1g007164 | 1:32,637,684-32,638,100 | + | C1H1g13840 | - | LOC_Os01g63500 | Os01g0854400 | - | Detail |