| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08416 | 1:27,925,685-27,929,922 | + | C1H1g06199 | CX1g005528 | LOC_Os01g54515 | Os01g0748950 | OsNPF4.5 | Detail |
| C2H1g22814 | 1:27,930,437-27,931,290 | + | C1H1g21519 | CX1g000885 | LOC_Os01g54520 | Os01g0749000 | - | Detail |
| C2H1g20660 | 1:27,932,265-27,934,722 | + | C1H1g06931 | CX1g004193 | LOC_Os01g54530 | Os01g0749100 | - | Detail |
| C2H1g21635 | 1:27,935,519-27,937,890 | + | C1H1g02075 | CX1g000277 | LOC_Os01g54540 | Os01g0749200 | WLP1, cp rpl13, cp RPL13 | Detail |
| C2H1g02265 | 1:27,938,809-27,941,059 | + | C1H1g00896 | CX1g005465 | LOC_Os01g54550 | Os01g0749300 | HSFA4A, OsHsfA4a, OsHsfA4b, OsHsf-04, HSFA4B, HSF04, OsHSF9, RHSF9, HSF9 | Detail |
| C2H1g14114 | 1:27,942,037-27,946,129 | - | C1H1g09179 | CX1g003457 | LOC_Os01g54560 | Os01g0749400 | - | Detail |
| C2H1g10922 | 1:27,965,504-27,970,673 | + | C1H1g19262 | CX1g003630 | LOC_Os01g54580 | Os01g0749900 | - | Detail |
| C2H1g29233 | 1:27,974,220-27,977,908 | + | C1H1g17809 | CX1g000465 | LOC_Os01g54590 | Os01g0750000 | - | Detail |
| C2H1g09211 | 1:27,980,401-27,982,082 | - | C1H1g24495 | CX1g004996 | LOC_Os01g54600 | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C2H1g25863 | 1:27,992,124-27,997,821 | + | C1H1g00277 | CX1g006527 | LOC_Os01g54620 | Os01g0750300 | - | Detail |
| C2H1g29243 | 1:28,006,149-28,009,921 | - | C1H1g12537 | - | LOC_Os01g54670 | Os01g0750500 | - | Detail |
| C2H1g03544 | 1:28,014,717-28,018,126 | - | C1H1g02730 | CX1g001248 | LOC_Os01g54700 | Os01g0750600 | - | Detail |
| C2H1g05225 | 1:28,029,339-28,029,912 | - | C1H1g08638 | CX1g000813 | LOC_Os01g53140 | Os01g0750800 | - | Detail |
| C2H1g04914 | 1:28,043,850-28,051,886 | + | C1H1g18828 | CX1g006345 | LOC_Os01g54784 | Os01g0751300 | - | Detail |
| C2H1g10063 | 1:28,056,456-28,059,326 | - | C1H1g01340 | CX1g003213 | LOC_Os01g54810 | Os01g0751600 | THIS1, This1 | Detail |
| C2H1g08663 | 1:28,061,852-28,063,890 | + | C1H1g28508 | CX1g001241 | LOC_Os01g54850 | Os01g0752100 | - | Detail |
| C2H1g27818 | 1:28,064,022-28,068,139 | - | C1H1g19975 | CX1g002849 | LOC_Os01g54860 | Os01g0752200 | NOG1 | Detail |
| C2H1g21432 | 1:28,070,490-28,072,113 | - | C1H1g04449 | CX1g004206 | LOC_Os01g54870 | Os01g0752300 | - | Detail |
| C2H1g04122 | 1:28,073,615-28,076,043 | - | C1H1g25368 | CX1g006705 | LOC_Os01g54880 | Os01g0752400 | - | Detail |
| C2H1g02082 | 1:28,080,846-28,086,760 | - | C1H1g06182 | CX1g007206 | LOC_Os01g54900 | Os01g0752600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002502 | 1:32,378,501-32,380,784 | - | C1H1g22802 | C2H1g19053 | LOC_Os01g62950 | Os01g0848700 | - | Detail |
| CX1g003078 | 1:32,389,761-32,391,403 | + | C1H1g07745 | C2H1g10907 | LOC_Os01g62970 | Os01g0848900 | - | Detail |
| CX1g001574 | 1:32,393,228-32,393,818 | - | C1H1g24931 | - | LOC_Os01g62980 | Os01g0849000 | - | Detail |
| CX1g001453 | 1:32,394,680-32,398,792 | - | C1H1g21425 | C2H1g16292 | LOC_Os01g62990 | Os01g0849100 | OsRacGEF1, RacGEF1 | Detail |
| CX1g005776 | 1:32,404,650-32,404,856 | + | C1H1g01663 | - | LOC_Os01g69890 | Os01g0849500 | - | Detail |
| CX1g004136 | 1:32,405,675-32,406,575 | - | C1H1g13733 | C2H1g12668 | LOC_Os01g63010 | Os01g0849600 | - | Detail |
| CX1g001895 | 1:32,428,976-32,430,434 | + | C1H1g00887 | C2H1g11763 | LOC_Os01g63050 | Os01g0850000 | - | Detail |
| CX1g002066 | 1:32,434,988-32,435,275 | + | C1H7g06954 | - | - | - | - | Detail |
| CX1g001763 | 1:32,439,708-32,444,239 | + | C1H1g20419 | C2H1g25333 | LOC_Os01g63060 | Os01g0850100 | OsIPCS1 | Detail |
| CX1g000954 | 1:32,446,762-32,449,338 | - | C1H1g28891 | C2H1g09490 | LOC_Os01g63150 | Os01g0850200 | - | Detail |
| CX1g004176 | 1:32,450,506-32,451,139 | + | C1H1g14257 | - | LOC_Os11g42050 | Os01g0509800 | - | Detail |
| CX1g000878 | 1:32,452,557-32,453,906 | + | C1H1g06998 | C2H1g19322 | LOC_Os01g66930 | Os01g0894100 | - | Detail |
| CX1g003917 | 1:32,454,336-32,455,261 | + | C1H1g06998 | C2H8g10843 | LOC_Os10g03970 | - | - | Detail |
| CX1g005718 | 1:32,460,171-32,461,618 | - | C1H1g23462 | C2H1g01083 | LOC_Os01g63160 | Os01g0850400 | Os2R_MYB16 | Detail |
| CX1g006436 | 1:32,463,783-32,464,875 | + | C1H1g18988 | C2H1g00932 | LOC_Os01g58160 | Os07g0631500 | - | Detail |
| CX1g004614 | 1:32,466,729-32,476,730 | + | C1H1g07266 | C2H1g11865 | LOC_Os01g63180 | Os01g0850550 | - | Detail |
| CX1g005774 | 1:32,481,894-32,484,270 | + | C1H1g27965 | C2H1g10947 | LOC_Os01g63200 | Os01g0850800 | - | Detail |
| CX1g003037 | 1:32,485,266-32,485,916 | + | C1H1g10620 | C2H1g04750 | LOC_Os01g63210 | Os01g0850900 | - | Detail |
| CX1g006965 | 1:32,486,535-32,488,514 | + | C1H1g24327 | C2H1g14118 | LOC_Os01g63220 | Os01g0851000 | WLP2, OsFLN1 | Detail |
| CX1g000066 | 1:32,489,663-32,493,482 | - | C1H1g16353 | C2H1g23902 | LOC_Os01g63230 | Os01g0851100 | - | Detail |