| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g23110 | 12:2,163,126-2,165,646 | + | C2H3g00532 | - | - | - | - | Detail |
| C1H12g00004 | 12:2,167,334-2,170,314 | + | C2H12g07258 | CX12g017200 | LOC_Os12g05230 | Os12g0147500 | - | Detail |
| C1H12g27513 | 12:2,197,989-2,198,425 | + | C2H12g29923 | CX12g018143 | LOC_Os12g05260 | Os12g0147800 | OsPSK5, PSK5 | Detail |
| C1H12g14632 | 12:2,223,473-2,235,536 | - | C2H12g11473 | CX12g015934 | LOC_Os12g05310 | Os12g0148400 | - | Detail |
| C1H12g24063 | 12:2,242,369-2,247,718 | + | C2H12g12632 | CX12g016883 | LOC_Os12g05320 | Os12g0148600 | - | Detail |
| C1H12g15447 | 12:2,248,546-2,250,167 | - | C2H12g01567 | CX12g015209 | LOC_Os12g05330 | Os12g0148700 | - | Detail |
| C1H12g30747 | 12:2,263,488-2,266,200 | + | C2H12g09179 | CX12g016510 | LOC_Os12g05360 | Os12g0149000 | - | Detail |
| C1H12g27311 | 12:2,272,260-2,272,586 | - | C2H12g13534 | CX12g017610 | LOC_Os12g05370 | Os11g0150450 | - | Detail |
| C1H12g27756 | 12:2,284,063-2,288,323 | + | C2H12g10982 | CX12g016333 | LOC_Os12g05394 | Os12g0149700 | OsAGC23 | Detail |
| C1H12g08261 | 12:2,292,337-2,293,596 | + | C2H12g22641 | CX12g018469 | LOC_Os12g05410 | Os12g0149800 | - | Detail |
| C1H12g16772 | 12:2,293,810-2,297,472 | - | C2H12g14618 | CX12g015371 | LOC_Os12g05420 | Os12g0149900 | - | Detail |
| C1H12g16085 | 12:2,340,148-2,341,871 | - | C2H12g10067 | CX12g018115 | LOC_Os12g05510 | Os12g0150700 | - | Detail |
| C1H12g07376 | 12:2,349,637-2,352,374 | + | C2H12g10170 | CX12g016582 | LOC_Os12g05540 | Os12g0151000 | - | Detail |
| C1H12g16450 | 12:2,365,383-2,372,118 | + | C2H12g01016 | - | - | Os12g0151900 | - | Detail |
| C1H12g08468 | 12:2,366,545-2,367,503 | - | C2H12g20148 | CX12g017701 | LOC_Os12g05590 | Os12g0152000 | Oscen1, FDR1, RCN3, Oscen1/ FDR1 | Detail |
| C1H12g07729 | 12:2,373,440-2,375,234 | + | C2H12g12457 | CX12g018389 | LOC_Os12g05600 | Os12g0152100 | - | Detail |
| C1H12g30150 | 12:2,390,811-2,391,824 | + | C2H12g13362 | CX12g018389 | LOC_Os12g05630 | Os12g0152500 | - | Detail |
| C1H12g00663 | 12:2,395,162-2,397,324 | - | C2H12g01708 | CX12g017206 | LOC_Os12g05640 | Os12g0152600 | - | Detail |
| C1H12g14242 | 12:2,398,304-2,402,880 | - | C2H12g04327 | CX12g016024 | LOC_Os12g05650 | Os12g0152700 | - | Detail |
| C1H12g29017 | 12:2,409,864-2,414,637 | + | C2H12g22774 | CX12g017584 | LOC_Os12g05660 | Os12g0152800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002502 | 1:32,378,501-32,380,784 | - | C1H1g22802 | C2H1g19053 | LOC_Os01g62950 | Os01g0848700 | - | Detail |
| CX1g003078 | 1:32,389,761-32,391,403 | + | C1H1g07745 | C2H1g10907 | LOC_Os01g62970 | Os01g0848900 | - | Detail |
| CX1g001574 | 1:32,393,228-32,393,818 | - | C1H1g24931 | - | LOC_Os01g62980 | Os01g0849000 | - | Detail |
| CX1g001453 | 1:32,394,680-32,398,792 | - | C1H1g21425 | C2H1g16292 | LOC_Os01g62990 | Os01g0849100 | OsRacGEF1, RacGEF1 | Detail |
| CX1g005776 | 1:32,404,650-32,404,856 | + | C1H1g01663 | - | LOC_Os01g69890 | Os01g0849500 | - | Detail |
| CX1g004136 | 1:32,405,675-32,406,575 | - | C1H1g13733 | C2H1g12668 | LOC_Os01g63010 | Os01g0849600 | - | Detail |
| CX1g001895 | 1:32,428,976-32,430,434 | + | C1H1g00887 | C2H1g11763 | LOC_Os01g63050 | Os01g0850000 | - | Detail |
| CX1g002066 | 1:32,434,988-32,435,275 | + | C1H7g06954 | - | - | - | - | Detail |
| CX1g001763 | 1:32,439,708-32,444,239 | + | C1H1g20419 | C2H1g25333 | LOC_Os01g63060 | Os01g0850100 | OsIPCS1 | Detail |
| CX1g000954 | 1:32,446,762-32,449,338 | - | C1H1g28891 | C2H1g09490 | LOC_Os01g63150 | Os01g0850200 | - | Detail |
| CX1g004176 | 1:32,450,506-32,451,139 | + | C1H1g14257 | - | LOC_Os11g42050 | Os01g0509800 | - | Detail |
| CX1g000878 | 1:32,452,557-32,453,906 | + | C1H1g06998 | C2H1g19322 | LOC_Os01g66930 | Os01g0894100 | - | Detail |
| CX1g003917 | 1:32,454,336-32,455,261 | + | C1H1g06998 | C2H8g10843 | LOC_Os10g03970 | - | - | Detail |
| CX1g005718 | 1:32,460,171-32,461,618 | - | C1H1g23462 | C2H1g01083 | LOC_Os01g63160 | Os01g0850400 | Os2R_MYB16 | Detail |
| CX1g006436 | 1:32,463,783-32,464,875 | + | C1H1g18988 | C2H1g00932 | LOC_Os01g58160 | Os07g0631500 | - | Detail |
| CX1g004614 | 1:32,466,729-32,476,730 | + | C1H1g07266 | C2H1g11865 | LOC_Os01g63180 | Os01g0850550 | - | Detail |
| CX1g005774 | 1:32,481,894-32,484,270 | + | C1H1g27965 | C2H1g10947 | LOC_Os01g63200 | Os01g0850800 | - | Detail |
| CX1g003037 | 1:32,485,266-32,485,916 | + | C1H1g10620 | C2H1g04750 | LOC_Os01g63210 | Os01g0850900 | - | Detail |
| CX1g006965 | 1:32,486,535-32,488,514 | + | C1H1g24327 | C2H1g14118 | LOC_Os01g63220 | Os01g0851000 | WLP2, OsFLN1 | Detail |
| CX1g000066 | 1:32,489,663-32,493,482 | - | C1H1g16353 | C2H1g23902 | LOC_Os01g63230 | Os01g0851100 | - | Detail |