| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g30168 | 1:28,289,444-28,299,703 | - | C1H1g02918 | CX1g003911 | LOC_Os01g55170 | Os01g0756400 | - | Detail |
| C2H1g05126 | 1:28,304,985-28,308,924 | + | C1H1g08295 | CX1g003221 | LOC_Os01g55190 | Os01g0756600 | - | Detail |
| C2H1g22597 | 1:28,318,179-28,320,472 | + | C1H1g21813 | CX1g002081 | LOC_Os01g55200 | Os01g0756700 | KAT1, OsKAT1 | Detail |
| C2H1g23299 | 1:28,338,570-28,340,635 | + | C1H1g15032 | CX1g004140 | LOC_Os01g55240 | Os01g0757200 | GA2OX3, OsGA2ox3, ga2ox 3, OsGA2ox-3, GA2ox3, GA2ox-3 | Detail |
| C2H1g18562 | 1:28,350,390-28,354,778 | + | C1H1g13228 | CX1g001542 | LOC_Os01g55260 | Os01g0757400 | - | Detail |
| C2H1g15915 | 1:28,355,293-28,358,083 | - | C1H1g20677 | CX1g000631 | LOC_Os01g55270 | Os01g0757500 | - | Detail |
| C2H1g24400 | 1:28,364,442-28,366,634 | - | C1H1g01435 | CX1g004257 | LOC_Os01g55280 | Os01g0757600 | - | Detail |
| C2H1g24899 | 1:28,374,828-28,378,687 | - | C1H1g01756 | CX1g006495 | LOC_Os01g55290 | Os01g0757700 | - | Detail |
| C2H1g22215 | 1:28,378,797-28,384,540 | + | C1H1g09106 | CX1g003762 | LOC_Os01g55300 | Os01g0757800 | - | Detail |
| C2H1g22679 | 1:28,384,600-28,387,735 | - | C1H1g06019 | CX1g005426 | LOC_Os01g55310 | Os01g0757900 | - | Detail |
| C2H1g13025 | 1:28,389,007-28,389,551 | - | C1H1g04207 | CX1g002989 | LOC_Os01g55320 | Os01g0758000 | - | Detail |
| C2H1g30086 | 1:28,407,994-28,413,990 | - | C1H1g13262 | CX1g006023 | LOC_Os01g55350 | Os01g0758300 | - | Detail |
| C2H1g17375 | 1:28,418,167-28,425,943 | - | - | - | - | - | - | Detail |
| C2H1g29396 | 1:28,473,173-28,476,145 | + | C1H1g00696 | CX1g004565 | LOC_Os01g55410 | Os01g0758900 | - | Detail |
| C2H1g14233 | 1:28,482,003-28,482,901 | + | C1H1g24935 | CX1g005946 | LOC_Os01g55420 | Os01g0759000 | - | Detail |
| C2H1g23330 | 1:28,483,746-28,485,982 | - | C1H1g27055 | CX1g002012 | LOC_Os01g55430 | Os01g0759100 | - | Detail |
| C2H1g17948 | 1:28,489,485-28,490,378 | + | C1H1g18342 | CX1g006544 | - | Os01g0159000 | OsDOG1L-1 | Detail |
| C2H1g19008 | 1:28,499,891-28,504,941 | - | C1H1g03820 | CX1g003443 | LOC_Os01g55450 | Os01g0759400 | - | Detail |
| C2H1g00211 | 1:28,513,090-28,517,518 | + | C1H1g27932 | CX1g002187 | LOC_Os01g55490 | Os01g0759700 | - | Detail |
| C2H1g11945 | 1:28,519,831-28,523,993 | + | C1H1g25715 | CX1g003122 | LOC_Os01g55500 | Os01g0759900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001759 | 1:32,244,919-32,245,358 | + | C1H1g10954 | C2H1g02239 | LOC_Os01g62770 | Os01g0846400 | - | Detail |
| CX1g003777 | 1:32,251,219-32,257,315 | + | C1H1g22173 | C2H1g17015 | LOC_Os01g62780 | Os01g0846450 | HESO1 | Detail |
| CX1g003923 | 1:32,260,187-32,264,236 | + | C1H1g22173 | C2H1g17015 | LOC_Os01g62790 | Os01g0846500 | - | Detail |
| CX1g002085 | 1:32,267,259-32,272,796 | - | C1H1g30030 | C2H1g07497 | LOC_Os01g62800 | Os01g0846600 | - | Detail |
| CX1g007024 | 1:32,276,272-32,276,873 | - | - | - | - | - | - | Detail |
| CX1g001923 | 1:32,280,763-32,281,014 | - | - | C2H2g19522 | - | - | - | Detail |
| CX1g004720 | 1:32,286,375-32,291,713 | + | C1H1g13164 | C2H1g05456 | LOC_Os01g62810 | Os01g0846800 | - | Detail |
| CX1g004243 | 1:32,293,260-32,297,089 | - | C1H1g18933 | C2H1g21397 | LOC_Os01g62820 | Os01g0846900 | - | Detail |
| CX1g001707 | 1:32,299,281-32,299,541 | + | C1H1g14655 | C2H5g17856 | LOC_Os01g62830 | Os01g0847100 | - | Detail |
| CX1g004162 | 1:32,300,754-32,301,191 | - | - | C2H1g26544 | - | - | - | Detail |
| CX1g005615 | 1:32,303,065-32,304,802 | + | C1H1g23016 | C2H1g03584 | LOC_Os01g62840 | Os01g0847200 | - | Detail |
| CX1g001706 | 1:32,307,218-32,310,795 | - | C1H1g02630 | C2H1g03289 | LOC_Os01g62850 | Os01g0847300 | - | Detail |
| CX1g003060 | 1:32,311,826-32,312,703 | - | C1H7g05031 | C2H1g28136 | - | - | - | Detail |
| CX1g005066 | 1:32,314,791-32,318,276 | + | C1H1g31870 | C2H1g07830 | LOC_Os01g62860 | Os01g0847600 | ARK1, OsAKR1 | Detail |
| CX1g005497 | 1:32,320,834-32,323,846 | + | C1H1g07686 | C2H1g21631 | LOC_Os01g62870 | Os01g0847700 | AKR2, AKR4C14, OsAKR2 | Detail |
| CX1g003081 | 1:32,328,532-32,330,560 | - | C1H1g14644 | C2H1g15059 | LOC_Os01g62890 | Os01g0847900 | - | Detail |
| CX1g000565 | 1:32,341,743-32,347,523 | + | C1H1g16705 | C2H1g11514 | LOC_Os01g62900 | Os01g0848200 | - | Detail |
| CX1g005616 | 1:32,348,738-32,350,720 | - | C1H1g11009 | C2H1g01586 | LOC_Os01g62910 | Os01g0848300 | - | Detail |
| CX1g000108 | 1:32,353,692-32,354,090 | + | C1H1g22605 | C2H8g05136 | - | - | - | Detail |
| CX1g003256 | 1:32,355,439-32,359,340 | - | C1H1g00348 | C2H1g22585 | LOC_Os01g62920 | Os01g0848400 | RIL1, qSH1, qsh1, qSH-1 | Detail |