| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g26495 | 6:25,202,621-25,204,454 | - | C1H6g30487 | CX6g042996 | LOC_Os02g06450 | - | - | Detail |
| C2H6g22763 | 6:25,206,905-25,210,727 | - | C1H6g23095 | CX6g043952 | LOC_Os06g47250 | Os06g0687000 | - | Detail |
| C2H6g29052 | 6:25,214,941-25,216,020 | + | C1H6g08187 | CX6g041420 | LOC_Os06g47260 | Os06g0687100 | - | Detail |
| C2H6g16561 | 6:25,216,616-25,217,710 | + | C1H6g07946 | CX6g043467 | LOC_Os06g47270 | Os06g0687200 | OsDIRP1 | Detail |
| C2H6g00336 | 6:25,221,578-25,225,912 | - | C1H6g16897 | CX6g044027 | LOC_Os06g47290 | Os06g0687400 | - | Detail |
| C2H6g20702 | 6:25,226,834-25,231,055 | - | C1H6g27517 | CX6g045285 | LOC_Os06g47294 | Os06g0687450 | - | Detail |
| C2H6g29325 | 6:25,232,588-25,237,540 | + | C1H6g00586 | CX6g041285 | LOC_Os06g47300 | Os06g0687500 | - | Detail |
| C2H6g00459 | 6:25,241,895-25,242,635 | + | C1H6g22446 | CX6g042264 | LOC_Os06g47310 | Os06g0687600 | - | Detail |
| C2H6g12967 | 6:25,242,745-25,242,993 | + | C1H6g22446 | CX6g042264 | LOC_Os06g47310 | Os06g0687600 | - | Detail |
| C2H6g20319 | 6:25,244,832-25,249,844 | - | C1H6g04180 | CX6g044832 | LOC_Os06g47320 | Os06g0687700 | - | Detail |
| C2H6g13915 | 6:25,251,681-25,256,636 | + | C1H6g10591 | CX6g045256 | LOC_Os06g47330 | Os06g0687800 | - | Detail |
| C2H6g24879 | 6:25,258,124-25,261,403 | + | C1H6g18505 | CX6g045563 | LOC_Os06g47340 | Os06g0687900 | OsIRX14, OsGT43J, OsGT43J/OsIRX14 | Detail |
| C2H6g23849 | 6:25,262,582-25,269,426 | + | C1H6g04786 | CX6g044139 | LOC_Os06g47350 | Os06g0688100 | - | Detail |
| C2H6g01192 | 6:25,270,676-25,271,989 | - | C1H6g31053 | CX6g042228 | LOC_Os06g47360 | Os06g0688200 | - | Detail |
| C2H6g29128 | 6:25,294,243-25,294,794 | - | C1H6g31053 | CX6g041739 | LOC_Os06g47390 | Os06g0688200 | - | Detail |
| C2H6g10086 | 6:25,336,834-25,341,383 | - | C1H6g06587 | CX6g042739 | LOC_Os06g47470 | Os06g0689600 | OsRLCK214 | Detail |
| C2H6g09447 | 6:25,350,081-25,359,051 | - | C1H6g27899 | CX6g043799 | LOC_Os06g47550 | Os06g0690700 | - | Detail |
| C2H6g12873 | 6:25,367,544-25,376,936 | - | C1H6g12422 | CX6g044055 | LOC_Os06g47580 | Os06g0691000 | - | Detail |
| C2H6g11819 | 6:25,392,736-25,398,529 | - | C1H6g21113 | CX6g041351 | LOC_Os06g47620 | Os06g0691400 | OsAH7 | Detail |
| C2H6g10551 | 6:25,405,865-25,406,689 | + | C1H6g30046 | CX6g042548 | LOC_Os06g47630 | Os06g0691500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001759 | 1:32,244,919-32,245,358 | + | C1H1g10954 | C2H1g02239 | LOC_Os01g62770 | Os01g0846400 | - | Detail |
| CX1g003777 | 1:32,251,219-32,257,315 | + | C1H1g22173 | C2H1g17015 | LOC_Os01g62780 | Os01g0846450 | HESO1 | Detail |
| CX1g003923 | 1:32,260,187-32,264,236 | + | C1H1g22173 | C2H1g17015 | LOC_Os01g62790 | Os01g0846500 | - | Detail |
| CX1g002085 | 1:32,267,259-32,272,796 | - | C1H1g30030 | C2H1g07497 | LOC_Os01g62800 | Os01g0846600 | - | Detail |
| CX1g007024 | 1:32,276,272-32,276,873 | - | - | - | - | - | - | Detail |
| CX1g001923 | 1:32,280,763-32,281,014 | - | - | C2H2g19522 | - | - | - | Detail |
| CX1g004720 | 1:32,286,375-32,291,713 | + | C1H1g13164 | C2H1g05456 | LOC_Os01g62810 | Os01g0846800 | - | Detail |
| CX1g004243 | 1:32,293,260-32,297,089 | - | C1H1g18933 | C2H1g21397 | LOC_Os01g62820 | Os01g0846900 | - | Detail |
| CX1g001707 | 1:32,299,281-32,299,541 | + | C1H1g14655 | C2H5g17856 | LOC_Os01g62830 | Os01g0847100 | - | Detail |
| CX1g004162 | 1:32,300,754-32,301,191 | - | - | C2H1g26544 | - | - | - | Detail |
| CX1g005615 | 1:32,303,065-32,304,802 | + | C1H1g23016 | C2H1g03584 | LOC_Os01g62840 | Os01g0847200 | - | Detail |
| CX1g001706 | 1:32,307,218-32,310,795 | - | C1H1g02630 | C2H1g03289 | LOC_Os01g62850 | Os01g0847300 | - | Detail |
| CX1g003060 | 1:32,311,826-32,312,703 | - | C1H7g05031 | C2H1g28136 | - | - | - | Detail |
| CX1g005066 | 1:32,314,791-32,318,276 | + | C1H1g31870 | C2H1g07830 | LOC_Os01g62860 | Os01g0847600 | ARK1, OsAKR1 | Detail |
| CX1g005497 | 1:32,320,834-32,323,846 | + | C1H1g07686 | C2H1g21631 | LOC_Os01g62870 | Os01g0847700 | AKR2, AKR4C14, OsAKR2 | Detail |
| CX1g003081 | 1:32,328,532-32,330,560 | - | C1H1g14644 | C2H1g15059 | LOC_Os01g62890 | Os01g0847900 | - | Detail |
| CX1g000565 | 1:32,341,743-32,347,523 | + | C1H1g16705 | C2H1g11514 | LOC_Os01g62900 | Os01g0848200 | - | Detail |
| CX1g005616 | 1:32,348,738-32,350,720 | - | C1H1g11009 | C2H1g01586 | LOC_Os01g62910 | Os01g0848300 | - | Detail |
| CX1g000108 | 1:32,353,692-32,354,090 | + | C1H1g22605 | C2H8g05136 | - | - | - | Detail |
| CX1g003256 | 1:32,355,439-32,359,340 | - | C1H1g00348 | C2H1g22585 | LOC_Os01g62920 | Os01g0848400 | RIL1, qSH1, qsh1, qSH-1 | Detail |