| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g05719 | 7:1,804,205-1,804,696 | + | C2H7g04010 | CX7g048543 | LOC_Os07g04950 | Os07g0142500 | - | Detail |
| C1H7g16311 | 7:1,809,748-1,811,202 | - | C2H7g14480 | CX7g049302 | LOC_Os07g04970 | Os07g0142700 | - | Detail |
| C1H7g23399 | 7:1,817,378-1,820,269 | + | C2H7g21727 | CX7g046865 | LOC_Os07g04990 | Os07g0142900 | - | Detail |
| C1H7g28462 | 7:1,821,068-1,824,762 | + | C2H7g27275 | CX7g048357 | LOC_Os07g05000 | Os07g0143000 | - | Detail |
| C1H7g12552 | 7:1,830,078-1,831,825 | + | C2H7g14513 | CX7g048872 | LOC_Os07g05010 | Os07g0143200 | OsPIF14, OsPIF14β, OsPIF14b, PIL14 | Detail |
| C1H7g09908 | 7:1,841,065-1,843,557 | - | C2H7g20668 | CX7g046854 | - | - | - | Detail |
| C1H7g25943 | 7:1,846,323-1,847,257 | - | C2H7g24721 | CX7g048569 | LOC_Os07g05040 | Os07g0143600 | - | Detail |
| C1H7g01640 | 7:1,848,063-1,853,483 | - | C2H7g00608 | CX7g048216 | LOC_Os07g05050 | Os07g0143700 | OsRH53 | Detail |
| C1H7g27141 | 7:1,869,555-1,869,847 | + | C2H4g24787 | CX7g050400 | - | - | - | Detail |
| C1H7g10624 | 7:1,874,356-1,876,217 | + | C2H7g04210 | CX7g049966 | LOC_Os07g05110 | Os07g0144500 | - | Detail |
| C1H7g23348 | 7:1,876,620-1,878,553 | - | C2H7g16275 | CX7g049847 | LOC_Os07g05120 | - | - | Detail |
| C1H7g28674 | 7:1,879,312-1,884,015 | - | C2H7g17564 | - | - | - | - | Detail |
| C1H7g03354 | 7:1,885,784-1,886,261 | + | C2H7g12809 | - | - | Os07g0144732 | - | Detail |
| C1H7g17569 | 7:1,902,974-1,908,418 | - | C2H7g13737 | CX7g049183 | LOC_Os07g05190 | Os07g0145400 | - | Detail |
| C1H7g14394 | 7:1,922,066-1,922,779 | - | C2H7g08515 | CX7g049547 | LOC_Os07g05260 | Os07g0146300 | - | Detail |
| C1H7g28358 | 7:1,936,905-1,938,030 | + | C2H7g29915 | CX7g048696 | LOC_Os07g05360 | Os07g0147500 | - | Detail |
| C1H7g21360 | 7:2,036,231-2,037,309 | + | C2H7g29915 | CX7g048670 | LOC_Os07g05360 | Os07g0147500 | - | Detail |
| C1H7g08457 | 7:2,038,918-2,039,753 | + | C2H7g26151 | CX7g046114 | LOC_Os07g05365 | Os07g0147550 | - | Detail |
| C1H7g12237 | 7:2,040,318-2,043,518 | - | C2H7g04201 | CX7g047728 | LOC_Os07g05370 | Os07g0147600 | - | Detail |
| C1H7g27117 | 7:2,047,482-2,049,662 | + | C2H7g24746 | CX7g049484 | LOC_Os07g05380 | Os07g0147700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001759 | 1:32,244,919-32,245,358 | + | C1H1g10954 | C2H1g02239 | LOC_Os01g62770 | Os01g0846400 | - | Detail |
| CX1g003777 | 1:32,251,219-32,257,315 | + | C1H1g22173 | C2H1g17015 | LOC_Os01g62780 | Os01g0846450 | HESO1 | Detail |
| CX1g003923 | 1:32,260,187-32,264,236 | + | C1H1g22173 | C2H1g17015 | LOC_Os01g62790 | Os01g0846500 | - | Detail |
| CX1g002085 | 1:32,267,259-32,272,796 | - | C1H1g30030 | C2H1g07497 | LOC_Os01g62800 | Os01g0846600 | - | Detail |
| CX1g007024 | 1:32,276,272-32,276,873 | - | - | - | - | - | - | Detail |
| CX1g001923 | 1:32,280,763-32,281,014 | - | - | C2H2g19522 | - | - | - | Detail |
| CX1g004720 | 1:32,286,375-32,291,713 | + | C1H1g13164 | C2H1g05456 | LOC_Os01g62810 | Os01g0846800 | - | Detail |
| CX1g004243 | 1:32,293,260-32,297,089 | - | C1H1g18933 | C2H1g21397 | LOC_Os01g62820 | Os01g0846900 | - | Detail |
| CX1g001707 | 1:32,299,281-32,299,541 | + | C1H1g14655 | C2H5g17856 | LOC_Os01g62830 | Os01g0847100 | - | Detail |
| CX1g004162 | 1:32,300,754-32,301,191 | - | - | C2H1g26544 | - | - | - | Detail |
| CX1g005615 | 1:32,303,065-32,304,802 | + | C1H1g23016 | C2H1g03584 | LOC_Os01g62840 | Os01g0847200 | - | Detail |
| CX1g001706 | 1:32,307,218-32,310,795 | - | C1H1g02630 | C2H1g03289 | LOC_Os01g62850 | Os01g0847300 | - | Detail |
| CX1g003060 | 1:32,311,826-32,312,703 | - | C1H7g05031 | C2H1g28136 | - | - | - | Detail |
| CX1g005066 | 1:32,314,791-32,318,276 | + | C1H1g31870 | C2H1g07830 | LOC_Os01g62860 | Os01g0847600 | ARK1, OsAKR1 | Detail |
| CX1g005497 | 1:32,320,834-32,323,846 | + | C1H1g07686 | C2H1g21631 | LOC_Os01g62870 | Os01g0847700 | AKR2, AKR4C14, OsAKR2 | Detail |
| CX1g003081 | 1:32,328,532-32,330,560 | - | C1H1g14644 | C2H1g15059 | LOC_Os01g62890 | Os01g0847900 | - | Detail |
| CX1g000565 | 1:32,341,743-32,347,523 | + | C1H1g16705 | C2H1g11514 | LOC_Os01g62900 | Os01g0848200 | - | Detail |
| CX1g005616 | 1:32,348,738-32,350,720 | - | C1H1g11009 | C2H1g01586 | LOC_Os01g62910 | Os01g0848300 | - | Detail |
| CX1g000108 | 1:32,353,692-32,354,090 | + | C1H1g22605 | C2H8g05136 | - | - | - | Detail |
| CX1g003256 | 1:32,355,439-32,359,340 | - | C1H1g00348 | C2H1g22585 | LOC_Os01g62920 | Os01g0848400 | RIL1, qSH1, qsh1, qSH-1 | Detail |