| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g18074 | 5:340,023-348,456 | + | C1H5g07348 | CX5g037999 | LOC_Os05g01690 | Os05g0107300 | - | Detail |
| C2H5g27472 | 5:350,876-362,780 | - | C1H5g18030 | CX5g038302 | LOC_Os05g01700 | Os05g0107600 | - | Detail |
| C2H5g16843 | 5:366,997-372,681 | + | C1H5g19380 | CX5g040021 | LOC_Os05g01710 | Os05g0107700 | - | Detail |
| C2H5g11892 | 5:376,755-378,797 | + | C1H5g20325 | CX5g040582 | LOC_Os05g01730 | Os05g0107900 | - | Detail |
| C2H5g21168 | 5:379,070-383,458 | - | C1H5g28813 | CX5g040580 | LOC_Os05g01750 | Os05g0108000 | - | Detail |
| C2H5g06480 | 5:383,937-388,179 | - | C1H5g21368 | CX5g039887 | LOC_Os05g01760 | Os05g0108100 | - | Detail |
| C2H5g09053 | 5:394,222-399,108 | + | C1H5g15185 | CX5g039387 | LOC_Os05g01780 | Os05g0108300 | - | Detail |
| C2H5g05095 | 5:400,945-401,862 | + | - | CX5g038082 | LOC_Os05g01790 | Os05g0108400 | - | Detail |
| C2H5g04330 | 5:406,462-406,758 | + | C1H5g01513 | CX5g040070 | LOC_Os05g10980 | Os05g0198700 | - | Detail |
| C2H5g29127 | 5:408,860-411,112 | + | C1H5g26822 | CX5g038883 | LOC_Os05g01810 | Os05g0108600 | - | Detail |
| C2H5g11304 | 5:413,016-414,935 | + | C1H5g12608 | CX5g039990 | LOC_Os05g01820 | Os05g0108800 | - | Detail |
| C2H5g10600 | 5:415,753-416,730 | - | C1H5g12767 | CX5g040088 | LOC_Os05g01900 | Os05g0109100 | - | Detail |
| C2H5g20027 | 5:417,454-419,793 | - | C1H5g28978 | CX5g040088 | LOC_Os05g01830 | Os05g0109100 | - | Detail |
| C2H5g07079 | 5:422,931-428,388 | + | C1H5g28978 | CX5g040088 | LOC_Os05g01900 | Os05g0109400 | - | Detail |
| C2H5g16158 | 5:428,846-434,892 | - | C1H5g13270 | CX5g040571 | LOC_Os05g01910 | Os05g0109600 | - | Detail |
| C2H5g30479 | 5:459,982-460,377 | + | C1H5g31686 | - | LOC_Os05g01950 | Os05g0110100 | - | Detail |
| C2H5g05509 | 5:468,500-477,924 | + | C1H5g07744 | CX5g039239 | LOC_Os05g01970 | Os05g0110300 | - | Detail |
| C2H5g14884 | 5:471,191-473,005 | - | C1H5g08931 | CX5g037835 | - | Os05g0574900 | OsSLRL2 | Detail |
| C2H5g28803 | 5:479,326-485,117 | + | C1H5g02397 | CX5g040128 | LOC_Os05g01990 | Os05g0110500 | OsRH17 | Detail |
| C2H5g24617 | 5:485,453-486,877 | - | C1H5g00170 | CX5g039122 | LOC_Os05g01994 | Os05g0110600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000448 | 1:31,974,104-31,977,662 | - | C1H1g17963 | C2H1g11723 | LOC_Os01g62244 | Os01g0839700 | - | Detail |
| CX1g004572 | 1:31,983,450-31,984,082 | - | - | - | - | - | - | Detail |
| CX1g000114 | 1:31,987,937-31,990,882 | + | C1H1g20143 | C2H1g09224 | LOC_Os01g62290 | Os01g0840100 | cHsp70-1 | Detail |
| CX1g000325 | 1:31,992,529-31,993,854 | - | C1H1g19514 | C2H1g21773 | LOC_Os01g62300 | Os01g0840200 | - | Detail |
| CX1g001065 | 1:32,007,776-32,010,008 | - | C1H1g29893 | C2H1g18215 | LOC_Os01g62310 | Os01g0840300 | - | Detail |
| CX1g000771 | 1:32,011,605-32,011,787 | + | - | - | - | - | - | Detail |
| CX1g004150 | 1:32,017,995-32,019,520 | - | C1H1g17139 | C2H1g18392 | LOC_Os01g62350 | Os01g0840700 | - | Detail |
| CX1g003133 | 1:32,025,722-32,026,866 | + | C1H1g12130 | C2H1g21625 | LOC_Os01g62370 | Os01g0841000 | - | Detail |
| CX1g001868 | 1:32,032,417-32,033,691 | - | C1H1g21585 | C2H5g15850 | LOC_Os01g62380 | Os01g0841100 | - | Detail |
| CX1g005410 | 1:32,036,366-32,041,086 | - | C1H1g08278 | C2H1g18206 | LOC_Os01g62390 | Os01g0841200 | - | Detail |
| CX1g006283 | 1:32,049,379-32,053,737 | + | C1H1g27442 | C2H1g01645 | LOC_Os01g62410 | Os01g0841500 | OsMYB3R-2, OsMYB3R2, MYB3R2 | Detail |
| CX1g001946 | 1:32,055,071-32,057,839 | + | C1H1g29013 | C2H1g14112 | LOC_Os01g62420 | Os01g0841600 | OscTPI | Detail |
| CX1g000812 | 1:32,062,627-32,063,733 | + | C1H1g20425 | C2H1g22797 | LOC_Os01g62430 | Os01g0841700 | OsERG1, OsERG1a, Rpp17-1 | Detail |
| CX1g005408 | 1:32,064,960-32,071,927 | - | C1H1g09787 | C2H1g16312 | LOC_Os01g62440 | Os01g0841800 | - | Detail |
| CX1g003735 | 1:32,085,044-32,087,506 | + | C1H1g04968 | C2H1g22514 | LOC_Os01g62460 | Os01g0842200 | - | Detail |
| CX1g004737 | 1:32,092,631-32,095,252 | - | C1H1g14751 | C2H1g04788 | LOC_Os01g62480 | Os01g0842400 | - | Detail |
| CX1g005658 | 1:32,104,302-32,106,550 | - | C1H1g07793 | C2H1g08845 | LOC_Os01g62490 | Os01g0842500 | - | Detail |
| CX1g000259 | 1:32,109,280-32,114,376 | - | C1H1g12370 | C2H1g06756 | LOC_Os01g62500 | Os01g0842600 | - | Detail |
| CX1g006004 | 1:32,115,294-32,120,372 | - | C1H1g15936 | C2H1g03150 | LOC_Os01g62514 | Os01g0842801 | - | Detail |
| CX1g006531 | 1:32,129,291-32,130,393 | - | C1H1g02981 | C2H6g28684 | LOC_Os01g31750 | Os01g0595300 | - | Detail |