| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g14674 | 12:14,730,415-14,730,684 | + | C1H6g30328 | CX12g016633 | LOC_Os06g39370 | Os06g0594400 | OsKMD2, OsFBK16 | Detail |
| C2H12g10117 | 12:14,738,891-14,739,409 | + | C1H12g30300 | CX12g016151 | LOC_Os12g28880 | Os12g0473900 | OsHyPRP45 | Detail |
| C2H12g21343 | 12:14,754,897-14,756,014 | + | - | - | - | - | - | Detail |
| C2H12g28218 | 12:14,816,608-14,819,315 | - | C1H12g28285 | CX12g016814 | LOC_Os12g29220 | Os12g0476200 | SWEET13, OsSWEET13 | Detail |
| C2H12g15425 | 12:14,888,618-14,891,065 | + | C1H12g31115 | CX12g017996 | LOC_Os12g29280 | Os12g0477000 | - | Detail |
| C2H12g01509 | 12:14,899,237-14,900,932 | - | C1H12g21315 | - | - | Os12g0477050 | - | Detail |
| C2H12g12135 | 12:14,911,410-14,912,267 | + | C1H12g07587 | CX12g016621 | LOC_Os12g29330 | Os12g0477400 | - | Detail |
| C2H12g11395 | 12:14,927,413-14,935,078 | - | C1H12g12648 | CX12g017275 | - | - | - | Detail |
| C2H12g17196 | 12:14,938,486-14,947,609 | - | C1H12g22288 | CX12g017166 | LOC_Os12g29350 | Os12g0477700 | - | Detail |
| C2H12g03246 | 12:14,968,262-14,969,888 | - | C1H12g13264 | CX12g017957 | LOC_Os12g29400 | - | - | Detail |
| C2H12g10440 | 12:14,985,779-14,988,562 | + | C1H12g24621 | CX12g018371 | LOC_Os12g29430 | Os12g0478400 | - | Detail |
| C2H12g04175 | 12:15,005,215-15,005,634 | - | C1H12g21784 | CX12g018080 | LOC_Os12g29450 | - | - | Detail |
| C2H12g10949 | 12:15,027,736-15,028,392 | + | C1H12g20599 | CX12g018113 | LOC_Os12g29480 | Os12g0478900 | - | Detail |
| C2H12g13424 | 12:15,034,422-15,035,533 | - | C1H12g00537 | - | - | - | - | Detail |
| C2H12g12179 | 12:15,049,539-15,051,001 | - | C1H12g10683 | CX12g015373 | LOC_Os12g29500 | Os12g0479100 | - | Detail |
| C2H12g13022 | 12:15,077,857-15,083,842 | - | C1H12g11280 | CX12g017952 | LOC_Os12g29520 | Os12g0479400 | - | Detail |
| C2H12g24396 | 12:15,112,962-15,119,341 | + | C1H12g26255 | CX12g017373 | LOC_Os12g29550 | Os12g0479900 | - | Detail |
| C2H12g19344 | 12:15,120,069-15,124,549 | + | C1H12g19180 | CX12g018470 | LOC_Os12g29560 | Os12g0480000 | OsDHHC30 | Detail |
| C2H12g22844 | 12:15,125,272-15,125,846 | + | C1H12g17150 | CX12g017916 | LOC_Os12g29570 | Os12g0480100 | - | Detail |
| C2H12g24381 | 12:15,128,759-15,133,181 | - | C1H12g26749 | CX12g016037 | LOC_Os12g29580 | Os12g0480200 | OsAGC24 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000448 | 1:31,974,104-31,977,662 | - | C1H1g17963 | C2H1g11723 | LOC_Os01g62244 | Os01g0839700 | - | Detail |
| CX1g004572 | 1:31,983,450-31,984,082 | - | - | - | - | - | - | Detail |
| CX1g000114 | 1:31,987,937-31,990,882 | + | C1H1g20143 | C2H1g09224 | LOC_Os01g62290 | Os01g0840100 | cHsp70-1 | Detail |
| CX1g000325 | 1:31,992,529-31,993,854 | - | C1H1g19514 | C2H1g21773 | LOC_Os01g62300 | Os01g0840200 | - | Detail |
| CX1g001065 | 1:32,007,776-32,010,008 | - | C1H1g29893 | C2H1g18215 | LOC_Os01g62310 | Os01g0840300 | - | Detail |
| CX1g000771 | 1:32,011,605-32,011,787 | + | - | - | - | - | - | Detail |
| CX1g004150 | 1:32,017,995-32,019,520 | - | C1H1g17139 | C2H1g18392 | LOC_Os01g62350 | Os01g0840700 | - | Detail |
| CX1g003133 | 1:32,025,722-32,026,866 | + | C1H1g12130 | C2H1g21625 | LOC_Os01g62370 | Os01g0841000 | - | Detail |
| CX1g001868 | 1:32,032,417-32,033,691 | - | C1H1g21585 | C2H5g15850 | LOC_Os01g62380 | Os01g0841100 | - | Detail |
| CX1g005410 | 1:32,036,366-32,041,086 | - | C1H1g08278 | C2H1g18206 | LOC_Os01g62390 | Os01g0841200 | - | Detail |
| CX1g006283 | 1:32,049,379-32,053,737 | + | C1H1g27442 | C2H1g01645 | LOC_Os01g62410 | Os01g0841500 | OsMYB3R-2, OsMYB3R2, MYB3R2 | Detail |
| CX1g001946 | 1:32,055,071-32,057,839 | + | C1H1g29013 | C2H1g14112 | LOC_Os01g62420 | Os01g0841600 | OscTPI | Detail |
| CX1g000812 | 1:32,062,627-32,063,733 | + | C1H1g20425 | C2H1g22797 | LOC_Os01g62430 | Os01g0841700 | OsERG1, OsERG1a, Rpp17-1 | Detail |
| CX1g005408 | 1:32,064,960-32,071,927 | - | C1H1g09787 | C2H1g16312 | LOC_Os01g62440 | Os01g0841800 | - | Detail |
| CX1g003735 | 1:32,085,044-32,087,506 | + | C1H1g04968 | C2H1g22514 | LOC_Os01g62460 | Os01g0842200 | - | Detail |
| CX1g004737 | 1:32,092,631-32,095,252 | - | C1H1g14751 | C2H1g04788 | LOC_Os01g62480 | Os01g0842400 | - | Detail |
| CX1g005658 | 1:32,104,302-32,106,550 | - | C1H1g07793 | C2H1g08845 | LOC_Os01g62490 | Os01g0842500 | - | Detail |
| CX1g000259 | 1:32,109,280-32,114,376 | - | C1H1g12370 | C2H1g06756 | LOC_Os01g62500 | Os01g0842600 | - | Detail |
| CX1g006004 | 1:32,115,294-32,120,372 | - | C1H1g15936 | C2H1g03150 | LOC_Os01g62514 | Os01g0842801 | - | Detail |
| CX1g006531 | 1:32,129,291-32,130,393 | - | C1H1g02981 | C2H6g28684 | LOC_Os01g31750 | Os01g0595300 | - | Detail |