| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g19057 | 1:30,046,880-30,050,741 | + | C1H1g04740 | CX1g002330 | LOC_Os01g58470 | Os01g0798500 | OsY3IP1 | Detail |
| C2H1g25767 | 1:30,052,731-30,053,261 | - | - | - | - | - | - | Detail |
| C2H1g16159 | 1:30,055,247-30,057,627 | - | C1H1g24753 | CX1g001040 | LOC_Os01g58500 | Os01g0798800 | - | Detail |
| C2H1g05286 | 1:30,057,887-30,059,080 | + | C1H1g14458 | CX1g005010 | LOC_Os01g58510 | Os01g0798900 | - | Detail |
| C2H1g30085 | 1:30,059,653-30,061,536 | - | C1H1g21828 | CX1g006206 | LOC_Os01g58520 | Os01g0799000 | - | Detail |
| C2H1g01176 | 1:30,066,396-30,071,132 | + | - | - | - | - | - | Detail |
| C2H1g18359 | 1:30,079,765-30,082,532 | + | C1H1g12245 | CX1g005130 | LOC_Os01g58550 | Os01g0799500 | - | Detail |
| C2H1g18714 | 1:30,087,617-30,090,433 | + | C1H1g29611 | CX1g005215 | LOC_Os01g58580 | Os01g0799900 | OsMC6 | Detail |
| C2H1g06172 | 1:30,092,032-30,093,289 | - | - | CX1g002130 | LOC_Os01g58590 | Os01g0800000 | - | Detail |
| C2H1g09595 | 1:30,096,710-30,096,919 | - | C1H1g12745 | CX1g002563 | LOC_Os01g58600 | Os01g0800101 | - | Detail |
| C2H1g03442 | 1:30,103,574-30,106,338 | + | C1H1g13802 | CX1g007223 | LOC_Os01g58610 | Os01g0800266 | - | Detail |
| C2H1g29094 | 1:30,115,335-30,121,491 | + | C1H1g08940 | CX1g003815 | LOC_Os01g58640 | Os01g0800500 | - | Detail |
| C2H1g27606 | 1:30,132,208-30,132,537 | + | C1H1g30861 | CX1g006207 | LOC_Os01g58650 | Os01g0800600 | - | Detail |
| C2H1g00644 | 1:30,135,420-30,135,850 | + | C1H1g30117 | CX1g006207 | LOC_Os01g58660 | Os01g0800600 | - | Detail |
| C2H1g21131 | 1:30,137,880-30,138,677 | + | C1H1g30117 | CX1g006207 | LOC_Os01g58670 | Os01g0800800 | - | Detail |
| C2H1g18712 | 1:30,138,887-30,139,403 | + | C1H1g26760 | CX1g006207 | LOC_Os01g58670 | Os01g0800900 | - | Detail |
| C2H1g01554 | 1:30,141,997-30,142,863 | + | C1H1g09904 | CX1g004061 | LOC_Os01g58670 | Os01g0800900 | - | Detail |
| C2H1g30505 | 1:30,144,479-30,149,158 | + | C1H1g08092 | CX1g001454 | LOC_Os01g58680 | Os01g0801000 | - | Detail |
| C2H1g06213 | 1:30,151,084-30,153,010 | + | C1H1g08092 | CX1g001454 | LOC_Os01g58690 | Os01g0801100 | - | Detail |
| C2H1g23744 | 1:30,155,444-30,157,591 | - | C1H1g00385 | CX1g006739 | LOC_Os01g58700 | Os01g0801200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000448 | 1:31,974,104-31,977,662 | - | C1H1g17963 | C2H1g11723 | LOC_Os01g62244 | Os01g0839700 | - | Detail |
| CX1g004572 | 1:31,983,450-31,984,082 | - | - | - | - | - | - | Detail |
| CX1g000114 | 1:31,987,937-31,990,882 | + | C1H1g20143 | C2H1g09224 | LOC_Os01g62290 | Os01g0840100 | cHsp70-1 | Detail |
| CX1g000325 | 1:31,992,529-31,993,854 | - | C1H1g19514 | C2H1g21773 | LOC_Os01g62300 | Os01g0840200 | - | Detail |
| CX1g001065 | 1:32,007,776-32,010,008 | - | C1H1g29893 | C2H1g18215 | LOC_Os01g62310 | Os01g0840300 | - | Detail |
| CX1g000771 | 1:32,011,605-32,011,787 | + | - | - | - | - | - | Detail |
| CX1g004150 | 1:32,017,995-32,019,520 | - | C1H1g17139 | C2H1g18392 | LOC_Os01g62350 | Os01g0840700 | - | Detail |
| CX1g003133 | 1:32,025,722-32,026,866 | + | C1H1g12130 | C2H1g21625 | LOC_Os01g62370 | Os01g0841000 | - | Detail |
| CX1g001868 | 1:32,032,417-32,033,691 | - | C1H1g21585 | C2H5g15850 | LOC_Os01g62380 | Os01g0841100 | - | Detail |
| CX1g005410 | 1:32,036,366-32,041,086 | - | C1H1g08278 | C2H1g18206 | LOC_Os01g62390 | Os01g0841200 | - | Detail |
| CX1g006283 | 1:32,049,379-32,053,737 | + | C1H1g27442 | C2H1g01645 | LOC_Os01g62410 | Os01g0841500 | OsMYB3R-2, OsMYB3R2, MYB3R2 | Detail |
| CX1g001946 | 1:32,055,071-32,057,839 | + | C1H1g29013 | C2H1g14112 | LOC_Os01g62420 | Os01g0841600 | OscTPI | Detail |
| CX1g000812 | 1:32,062,627-32,063,733 | + | C1H1g20425 | C2H1g22797 | LOC_Os01g62430 | Os01g0841700 | OsERG1, OsERG1a, Rpp17-1 | Detail |
| CX1g005408 | 1:32,064,960-32,071,927 | - | C1H1g09787 | C2H1g16312 | LOC_Os01g62440 | Os01g0841800 | - | Detail |
| CX1g003735 | 1:32,085,044-32,087,506 | + | C1H1g04968 | C2H1g22514 | LOC_Os01g62460 | Os01g0842200 | - | Detail |
| CX1g004737 | 1:32,092,631-32,095,252 | - | C1H1g14751 | C2H1g04788 | LOC_Os01g62480 | Os01g0842400 | - | Detail |
| CX1g005658 | 1:32,104,302-32,106,550 | - | C1H1g07793 | C2H1g08845 | LOC_Os01g62490 | Os01g0842500 | - | Detail |
| CX1g000259 | 1:32,109,280-32,114,376 | - | C1H1g12370 | C2H1g06756 | LOC_Os01g62500 | Os01g0842600 | - | Detail |
| CX1g006004 | 1:32,115,294-32,120,372 | - | C1H1g15936 | C2H1g03150 | LOC_Os01g62514 | Os01g0842801 | - | Detail |
| CX1g006531 | 1:32,129,291-32,130,393 | - | C1H1g02981 | C2H6g28684 | LOC_Os01g31750 | Os01g0595300 | - | Detail |