| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g12970 | 12:21,476,361-21,478,199 | + | C2H12g17972 | CX12g015404 | LOC_Os12g42280 | Os12g0617400 | OsNCED5 | Detail |
| C1H12g01907 | 12:21,509,118-21,515,146 | - | C2H12g07294 | CX12g018530 | LOC_Os12g42300 | Os12g0617800 | - | Detail |
| C1H12g22694 | 12:21,515,842-21,524,774 | - | C2H12g05116 | CX12g018388 | LOC_Os12g42310 | Os12g0617900 | - | Detail |
| C1H12g28509 | 12:21,528,972-21,530,979 | + | C2H12g08733 | CX12g018606 | LOC_Os12g42330 | Os12g0618000 | - | Detail |
| C1H12g04593 | 12:21,540,520-21,544,302 | - | C2H12g05496 | CX12g017317 | LOC_Os12g42370 | Os12g0618300 | - | Detail |
| C1H12g09466 | 12:21,545,588-21,546,212 | - | C2H12g04967 | CX12g018118 | LOC_Os12g42380 | - | - | Detail |
| C1H12g30041 | 12:21,551,630-21,551,946 | - | C2H12g20615 | - | - | Os12g0618400 | - | Detail |
| C1H12g13326 | 12:21,553,216-21,557,301 | - | C2H12g17984 | CX12g015821 | LOC_Os12g42400 | Os12g0618600 | OsNF-YA10, OsHAP2F | Detail |
| C1H12g31454 | 12:21,568,218-21,579,921 | - | C2H12g07773 | CX12g016179 | LOC_Os12g42420 | Os12g0618800 | OsPLS3, OsGCNT | Detail |
| C1H12g31525 | 12:21,583,427-21,585,405 | + | C2H12g05224 | CX12g017575 | LOC_Os12g42440 | Os12g0619100 | - | Detail |
| C1H12g11229 | 12:21,585,955-21,588,072 | + | C2H12g16067 | CX12g017569 | LOC_Os12g42450 | Os12g0619700 | - | Detail |
| C1H12g01746 | 12:21,591,778-21,596,799 | + | C2H12g29339 | CX12g016342 | LOC_Os12g42520 | Os12g0620000 | - | Detail |
| C1H12g24439 | 12:21,598,247-21,598,660 | + | C2H12g16938 | CX12g016971 | LOC_Os12g42530 | Os12g0620100 | - | Detail |
| C1H12g20411 | 12:21,602,620-21,607,205 | - | C2H12g10165 | CX12g015161 | LOC_Os12g42550 | Os12g0620400 | - | Detail |
| C1H12g29877 | 12:21,610,246-21,614,573 | - | C2H12g04627 | CX12g015928 | LOC_Os12g42570 | Os12g0620600 | - | Detail |
| C1H12g29580 | 12:21,612,600-21,615,106 | + | - | CX12g016008 | - | Os12g0620733 | - | Detail |
| C1H12g25875 | 12:21,627,311-21,634,640 | + | C2H12g09193 | CX12g017389 | LOC_Os12g42600 | Os12g0621000 | - | Detail |
| C1H12g04704 | 12:21,636,672-21,637,390 | - | - | - | - | - | - | Detail |
| C1H12g24895 | 12:21,655,775-21,658,121 | + | C2H12g06683 | CX12g018072 | LOC_Os12g42610 | Os12g0621100 | - | Detail |
| C1H12g18614 | 12:21,661,338-21,661,712 | - | C2H12g03866 | CX12g018040 | LOC_Os12g42620 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000448 | 1:31,974,104-31,977,662 | - | C1H1g17963 | C2H1g11723 | LOC_Os01g62244 | Os01g0839700 | - | Detail |
| CX1g004572 | 1:31,983,450-31,984,082 | - | - | - | - | - | - | Detail |
| CX1g000114 | 1:31,987,937-31,990,882 | + | C1H1g20143 | C2H1g09224 | LOC_Os01g62290 | Os01g0840100 | cHsp70-1 | Detail |
| CX1g000325 | 1:31,992,529-31,993,854 | - | C1H1g19514 | C2H1g21773 | LOC_Os01g62300 | Os01g0840200 | - | Detail |
| CX1g001065 | 1:32,007,776-32,010,008 | - | C1H1g29893 | C2H1g18215 | LOC_Os01g62310 | Os01g0840300 | - | Detail |
| CX1g000771 | 1:32,011,605-32,011,787 | + | - | - | - | - | - | Detail |
| CX1g004150 | 1:32,017,995-32,019,520 | - | C1H1g17139 | C2H1g18392 | LOC_Os01g62350 | Os01g0840700 | - | Detail |
| CX1g003133 | 1:32,025,722-32,026,866 | + | C1H1g12130 | C2H1g21625 | LOC_Os01g62370 | Os01g0841000 | - | Detail |
| CX1g001868 | 1:32,032,417-32,033,691 | - | C1H1g21585 | C2H5g15850 | LOC_Os01g62380 | Os01g0841100 | - | Detail |
| CX1g005410 | 1:32,036,366-32,041,086 | - | C1H1g08278 | C2H1g18206 | LOC_Os01g62390 | Os01g0841200 | - | Detail |
| CX1g006283 | 1:32,049,379-32,053,737 | + | C1H1g27442 | C2H1g01645 | LOC_Os01g62410 | Os01g0841500 | OsMYB3R-2, OsMYB3R2, MYB3R2 | Detail |
| CX1g001946 | 1:32,055,071-32,057,839 | + | C1H1g29013 | C2H1g14112 | LOC_Os01g62420 | Os01g0841600 | OscTPI | Detail |
| CX1g000812 | 1:32,062,627-32,063,733 | + | C1H1g20425 | C2H1g22797 | LOC_Os01g62430 | Os01g0841700 | OsERG1, OsERG1a, Rpp17-1 | Detail |
| CX1g005408 | 1:32,064,960-32,071,927 | - | C1H1g09787 | C2H1g16312 | LOC_Os01g62440 | Os01g0841800 | - | Detail |
| CX1g003735 | 1:32,085,044-32,087,506 | + | C1H1g04968 | C2H1g22514 | LOC_Os01g62460 | Os01g0842200 | - | Detail |
| CX1g004737 | 1:32,092,631-32,095,252 | - | C1H1g14751 | C2H1g04788 | LOC_Os01g62480 | Os01g0842400 | - | Detail |
| CX1g005658 | 1:32,104,302-32,106,550 | - | C1H1g07793 | C2H1g08845 | LOC_Os01g62490 | Os01g0842500 | - | Detail |
| CX1g000259 | 1:32,109,280-32,114,376 | - | C1H1g12370 | C2H1g06756 | LOC_Os01g62500 | Os01g0842600 | - | Detail |
| CX1g006004 | 1:32,115,294-32,120,372 | - | C1H1g15936 | C2H1g03150 | LOC_Os01g62514 | Os01g0842801 | - | Detail |
| CX1g006531 | 1:32,129,291-32,130,393 | - | C1H1g02981 | C2H6g28684 | LOC_Os01g31750 | Os01g0595300 | - | Detail |