| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g03165 | 12:1,360,288-1,360,858 | - | C2H12g12992 | CX12g018471 | LOC_Os12g03540 | Os12g0129400 | - | Detail |
| C1H12g14356 | 12:1,375,895-1,376,203 | + | C2H12g26837 | - | - | - | - | Detail |
| C1H12g18819 | 12:1,376,295-1,376,501 | + | C2H12g25798 | - | - | - | - | Detail |
| C1H12g26172 | 12:1,376,636-1,376,971 | + | C2H12g21094 | CX12g016696 | LOC_Os12g06930 | - | - | Detail |
| C1H12g09635 | 12:1,397,115-1,402,343 | - | C2H12g15851 | CX12g017965 | LOC_Os12g03720 | Os12g0131150 | - | Detail |
| C1H12g19116 | 12:1,405,307-1,408,132 | + | C2H12g29504 | CX12g017842 | LOC_Os12g03730 | Os12g0131200 | - | Detail |
| C1H12g05970 | 12:1,408,673-1,409,306 | - | C2H12g21923 | CX12g016235 | LOC_Os11g03920 | Os12g0131266 | - | Detail |
| C1H12g16146 | 12:1,409,316-1,409,582 | - | C2H12g30346 | - | - | - | - | Detail |
| C1H12g22049 | 12:1,410,865-1,415,552 | - | C2H12g04882 | CX12g015993 | LOC_Os12g03790 | Os12g0131900 | - | Detail |
| C1H12g27375 | 12:1,426,768-1,431,870 | + | C2H12g26793 | CX12g015231 | LOC_Os12g03810 | Os12g0132200 | - | Detail |
| C1H12g17838 | 12:1,428,448-1,432,862 | - | C2H12g09084 | CX12g016449 | LOC_Os12g03816 | Os12g0132300 | OsCML3 | Detail |
| C1H12g18740 | 12:1,433,948-1,437,904 | - | C2H12g06878 | CX12g016015 | LOC_Os12g03822 | Os12g0132400 | OsRIP1 | Detail |
| C1H12g16357 | 12:1,438,837-1,439,218 | - | C2H12g15683 | CX12g015235 | - | - | - | Detail |
| C1H12g00495 | 12:1,442,784-1,448,368 | - | C2H12g06293 | CX12g016345 | LOC_Os11g04010 | Os12g0500800 | - | Detail |
| C1H12g09294 | 12:1,450,440-1,454,857 | - | C2H12g25753 | - | LOC_Os12g03830 | Os12g0132500 | - | Detail |
| C1H12g05342 | 12:1,459,029-1,463,614 | - | C2H12g10240 | - | LOC_Os12g03860 | Os12g0132800 | - | Detail |
| C1H12g05091 | 12:1,469,365-1,470,729 | + | C2H12g14231 | - | - | Os12g0132900 | - | Detail |
| C1H12g13868 | 12:1,470,627-1,476,361 | - | C2H12g02432 | - | LOC_Os12g03870 | Os12g0133000 | - | Detail |
| C1H12g01014 | 12:1,477,537-1,479,737 | - | C2H12g01792 | CX11g013375 | LOC_Os12g03880 | Os12g0133050 | OsP0C | Detail |
| C1H12g17796 | 12:1,487,917-1,495,408 | - | C2H12g17288 | - | LOC_Os12g03899 | Os12g0133100 | OsVMT, OsZIFL12, OsVMT/OsZIFL12 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003679 | 1:31,872,247-31,873,901 | + | C1H1g29335 | C2H1g10234 | LOC_Os01g62010 | Os01g0837200 | - | Detail |
| CX1g003883 | 1:31,875,823-31,879,017 | + | C1H1g10810 | C2H1g23741 | LOC_Os01g62020 | Os01g0837300 | OsUXS4 | Detail |
| CX1g004440 | 1:31,879,503-31,880,135 | - | - | - | LOC_Os01g62030 | - | - | Detail |
| CX1g001070 | 1:31,880,710-31,885,719 | + | C1H1g12894 | C2H1g07218 | LOC_Os01g62040 | Os01g0837500 | - | Detail |
| CX1g002011 | 1:31,891,744-31,892,523 | + | C1H1g00961 | C2H1g26587 | LOC_Os01g62060 | Os01g0837600 | DGP1 | Detail |
| CX1g005062 | 1:31,896,245-31,896,415 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g005449 | 1:31,896,597-31,896,857 | - | C1H1g17576 | - | - | Os01g0837700 | - | Detail |
| CX1g002419 | 1:31,897,569-31,901,791 | - | C1H1g29125 | C2H1g28819 | LOC_Os01g62070 | Os01g0837800 | - | Detail |
| CX1g006172 | 1:31,906,073-31,909,788 | - | C1H1g06942 | C2H1g16663 | LOC_Os01g62080 | Os01g0837900 | - | Detail |
| CX1g005503 | 1:31,913,969-31,914,250 | - | C1H1g02866 | - | LOC_Os01g62110 | Os01g0838200 | - | Detail |
| CX1g003611 | 1:31,917,136-31,917,312 | + | - | - | - | Os01g0838300 | - | Detail |
| CX1g001081 | 1:31,919,175-31,919,441 | + | - | - | - | - | - | Detail |
| CX1g002865 | 1:31,928,840-31,932,145 | + | C1H1g29226 | C2H1g02384 | LOC_Os05g38610 | Os01g0838800 | - | Detail |
| CX1g005211 | 1:31,932,842-31,935,909 | - | C1H1g17733 | C2H1g20151 | LOC_Os01g62160 | Os01g0838900 | - | Detail |
| CX1g006224 | 1:31,953,338-31,953,739 | - | - | - | - | - | - | Detail |
| CX1g002978 | 1:31,956,615-31,956,797 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g002459 | 1:31,958,592-31,959,140 | + | C1H1g09133 | C2H5g12287 | LOC_Os01g62190 | Os01g0839100 | ZFP179 | Detail |
| CX1g003395 | 1:31,960,017-31,962,320 | - | C1H1g10232 | C2H1g16708 | LOC_Os01g62200 | Os01g0839200 | OsDSR2 | Detail |
| CX1g004020 | 1:31,964,849-31,969,807 | + | C1H1g05756 | C2H1g22109 | LOC_Os01g62220 | Os01g0839400 | - | Detail |
| CX1g002747 | 1:31,970,711-31,971,130 | - | C1H1g25854 | C2H5g26633 | LOC_Os01g62230 | Os01g0839500 | - | Detail |