| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g16453 | 2:2,472,866-2,476,401 | - | C1H2g14077 | CX2g019747 | LOC_Os02g05660 | Os02g0150100 | - | Detail |
| C2H2g10679 | 2:2,485,420-2,488,156 | + | C1H2g22203 | - | LOC_Os02g05680 | Os02g0150300 | - | Detail |
| C2H2g28552 | 2:2,489,286-2,493,600 | + | C1H2g04684 | CX2g018988 | LOC_Os02g09790 | Os02g0286850 | - | Detail |
| C2H2g02218 | 2:2,497,090-2,501,276 | + | C1H2g03457 | CX2g020416 | LOC_Os02g05692 | Os02g0150700 | OsDHSRP1 | Detail |
| C2H2g02918 | 2:2,504,624-2,508,273 | + | C1H2g10911 | CX2g021275 | LOC_Os02g05700 | Os02g0150800 | OsZTL1 | Detail |
| C2H2g19150 | 2:2,509,642-2,512,586 | - | C1H2g16735 | CX2g022629 | LOC_Os02g05710 | Os02g0150900 | - | Detail |
| C2H2g10999 | 2:2,522,143-2,528,071 | - | C1H2g10714 | CX2g021128 | LOC_Os02g05730 | Os02g0151100 | - | Detail |
| C2H2g14489 | 2:2,529,886-2,535,220 | - | C1H2g03046 | CX2g019402 | LOC_Os02g05744 | Os02g0151300 | - | Detail |
| C2H2g24062 | 2:2,544,832-2,550,461 | + | C1H2g11128 | CX2g020856 | LOC_Os02g05770 | Os02g0151400 | - | Detail |
| C2H2g19146 | 2:2,556,497-2,560,594 | + | C1H2g05884 | CX2g021034 | LOC_Os02g05820 | Os02g0152300 | - | Detail |
| C2H2g26042 | 2:2,561,670-2,562,661 | + | C1H2g10224 | CX2g020432 | LOC_Os02g05830 | Os02g0152400 | RbcS1, OsRBCS1, OsRbcS1 | Detail |
| C2H2g00493 | 2:2,562,264-2,568,957 | - | C1H2g09085 | CX2g024888 | LOC_Os02g05840 | Os02g0152500 | - | Detail |
| C2H2g16173 | 2:2,575,129-2,579,390 | - | C1H2g06159 | CX2g023661 | LOC_Os02g05870 | Os02g0152600 | - | Detail |
| C2H2g26431 | 2:2,580,377-2,593,828 | - | C1H2g27785 | CX2g019434 | LOC_Os02g05880 | Os02g0152700 | OsNRPE1, FEM3 | Detail |
| C2H2g09396 | 2:2,598,710-2,601,013 | - | C1H2g20010 | CX2g024806 | LOC_Os02g05890 | Os02g0152900 | YL1 | Detail |
| C2H2g06285 | 2:2,604,030-2,608,866 | + | C1H2g04114 | CX2g019870 | LOC_Os02g05900 | Os02g0153000 | - | Detail |
| C2H2g10613 | 2:2,610,734-2,613,877 | - | C1H2g21236 | CX2g019353 | LOC_Os02g05910 | Os02g0153100 | LRK8 | Detail |
| C2H2g02191 | 2:2,614,903-2,617,998 | - | C1H2g21236 | CX2g019353 | LOC_Os02g05920 | Os02g0153200 | LRK7 | Detail |
| C2H2g23869 | 2:2,622,229-2,631,246 | - | C1H2g11534 | CX2g023705 | LOC_Os02g05940 | Os02g0153500 | LRK5 | Detail |
| C2H2g16848 | 2:2,634,462-2,634,891 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003450 | 1:31,683,101-31,685,597 | - | C1H1g22933 | C2H1g11920 | LOC_Os01g61720 | Os01g0833800 | - | Detail |
| CX1g000146 | 1:31,702,631-31,706,357 | - | C1H1g12416 | C2H1g03973 | LOC_Os01g61760 | Os01g0834100 | - | Detail |
| CX1g002696 | 1:31,710,780-31,720,875 | + | C1H1g06212 | C2H1g25411 | LOC_Os01g61780 | Os01g0834200 | - | Detail |
| CX1g000392 | 1:31,728,832-31,730,226 | - | C1H1g30061 | C2H1g11057 | LOC_Os01g61810 | Os01g0834400 | HAP3A, OsHAP3A, OsNF-YB-2, NFYB2 | Detail |
| CX1g001710 | 1:31,732,062-31,736,839 | - | C1H1g07712 | C2H1g10042 | LOC_Os01g61814 | Os01g0834500 | - | Detail |
| CX1g001115 | 1:31,739,358-31,743,751 | + | C1H1g15578 | C2H1g11754 | LOC_Os01g61830 | Os01g0834700 | - | Detail |
| CX1g005583 | 1:31,747,037-31,747,480 | - | C1H1g28438 | C2H1g04024 | LOC_Os01g61840 | Os01g0834800 | - | Detail |
| CX1g004964 | 1:31,756,289-31,764,645 | - | C1H1g29053 | C2H1g07677 | LOC_Os01g61860 | Os01g0835000 | - | Detail |
| CX1g001158 | 1:31,780,325-31,785,704 | + | C1H1g14368 | C2H1g02343 | LOC_Os01g61880 | Os01g0835500 | - | Detail |
| CX1g006154 | 1:31,785,907-31,786,758 | - | - | - | LOC_Os01g61890 | Os01g0835600 | - | Detail |
| CX1g000977 | 1:31,796,656-31,797,857 | - | C1H1g23056 | C2H1g27745 | LOC_Os01g61900 | Os01g0835700 | OsCCT01 | Detail |
| CX1g007240 | 1:31,802,332-31,805,113 | - | C1H1g04133 | C2H1g21602 | LOC_Os01g61910 | Os01g0835800 | - | Detail |
| CX1g000993 | 1:31,814,934-31,823,726 | + | C1H1g12123 | C2H1g29300 | LOC_Os01g61930 | - | - | Detail |
| CX1g006864 | 1:31,827,353-31,827,517 | + | - | - | LOC_Os01g61335 | Os01g0829266 | - | Detail |
| CX1g006810 | 1:31,831,646-31,833,898 | + | C1H1g13267 | C2H1g05759 | LOC_Os01g61940 | Os01g0836600 | OsABCG3 | Detail |
| CX1g001966 | 1:31,841,843-31,843,138 | - | C1H1g15863 | C2H1g29885 | LOC_Os01g61960 | Os01g0836700 | - | Detail |
| CX1g004021 | 1:31,845,018-31,846,367 | - | C1H1g03833 | C2H1g29885 | LOC_Os01g61970 | Os01g0836800 | - | Detail |
| CX1g000026 | 1:31,855,549-31,856,643 | + | C1H1g23659 | - | LOC_Os01g61980 | Os01g0836900 | - | Detail |
| CX1g004745 | 1:31,859,515-31,862,619 | - | C1H1g22081 | C2H1g06537 | LOC_Os01g61990 | Os01g0837000 | - | Detail |
| CX1g000248 | 1:31,864,854-31,866,660 | + | C1H1g08351 | C2H1g25983 | LOC_Os01g62000 | Os01g0837100 | OsPLL2 | Detail |