| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g10880 | 5:18,126,767-18,127,750 | + | C1H5g19897 | CX5g039319 | LOC_Os05g36900 | Os05g0440000 | - | Detail |
| C2H5g07278 | 5:18,133,363-18,135,813 | - | C1H5g31606 | CX5g039643 | LOC_Os05g36910 | Os05g0440100 | - | Detail |
| C2H5g18409 | 5:18,137,707-18,139,965 | - | C1H5g15798 | CX5g038860 | LOC_Os05g36920 | Os05g0440250 | OsHDA712 | Detail |
| C2H5g18040 | 5:18,140,520-18,140,966 | - | C1H8g21037 | CX8g051236 | - | - | - | Detail |
| C2H5g22538 | 5:18,145,061-18,147,287 | - | C1H5g18373 | CX5g037033 | LOC_Os05g36920 | Os05g0440250 | OsHDA712 | Detail |
| C2H5g10085 | 5:18,156,378-18,162,343 | + | C1H5g03011 | CX5g038922 | LOC_Os05g36960 | Os05g0440800 | - | Detail |
| C2H5g22593 | 5:18,164,942-18,165,664 | + | C1H5g17274 | CX5g036721 | LOC_Os05g36970 | Os05g0440900 | - | Detail |
| C2H5g17186 | 5:18,179,859-18,180,920 | - | C1H5g20030 | CX5g036937 | LOC_Os05g36990 | Os05g0441400 | - | Detail |
| C2H5g09677 | 5:18,190,179-18,190,682 | + | C1H11g06384 | CX5g039812 | LOC_Os05g37000 | Os05g0441750 | - | Detail |
| C2H5g15759 | 5:18,198,085-18,198,720 | + | - | - | LOC_Os05g37010 | - | - | Detail |
| C2H5g23100 | 5:18,206,012-18,206,416 | - | C1H5g03898 | CX5g037991 | LOC_Os05g37030 | Os05g0442000 | - | Detail |
| C2H5g23234 | 5:18,226,547-18,227,490 | - | C1H5g24883 | CX5g037273 | LOC_Os05g37050 | Os05g0442400 | MID1, OsMYB-1 | Detail |
| C2H5g00840 | 5:18,230,945-18,231,762 | - | C1H5g10359 | CX5g037170 | LOC_Os05g37060 | Os05g0442400 | MID1, OsMYB-1 | Detail |
| C2H5g00201 | 5:18,237,620-18,238,849 | - | C1H5g08191 | CX5g040230 | LOC_Os05g37080 | Os05g0442700 | - | Detail |
| C2H5g12660 | 5:18,241,339-18,245,198 | + | - | CX5g038652 | - | - | - | Detail |
| C2H5g28484 | 5:18,260,199-18,265,647 | - | C1H5g19867 | CX5g039130 | LOC_Os05g37120 | Os05g0443300 | - | Detail |
| C2H5g27590 | 5:18,267,776-18,271,342 | - | C1H5g09712 | CX5g039104 | LOC_Os05g37130 | Os05g0443400 | - | Detail |
| C2H5g23800 | 5:18,273,845-18,274,246 | - | C1H5g30431 | CX1g006506 | LOC_Os05g37140 | Os05g0443500 | - | Detail |
| C2H5g20139 | 5:18,276,193-18,279,778 | - | C1H5g02201 | CX5g036774 | LOC_Os05g37150 | Os05g0443700 | - | Detail |
| C2H5g16230 | 5:18,280,028-18,283,707 | - | C1H5g03814 | CX5g036747 | LOC_Os05g37160 | Os05g0443800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001275 | 1:31,558,445-31,559,020 | - | C1H1g19774 | C2H1g08171 | LOC_Os01g61470 | Os01g0830900 | - | Detail |
| CX1g002960 | 1:31,570,249-31,570,923 | + | C1H1g14773 | C2H1g07733 | LOC_Os01g61480 | Os01g0831000 | LAX1, lax, lax(lx), LAX1, lx, OsbHLH123 | Detail |
| CX1g003525 | 1:31,574,958-31,577,885 | + | C1H1g29926 | C2H1g10096 | LOC_Os01g61500 | Os01g0831200 | OsBAG4, EIP1 | Detail |
| CX1g003586 | 1:31,578,531-31,580,750 | - | C1H1g29563 | C2H1g19797 | LOC_Os01g61510 | Os01g0831300 | - | Detail |
| CX1g004163 | 1:31,583,546-31,585,240 | - | C1H1g16875 | C2H1g10064 | LOC_Os01g61550 | Os01g0831900 | - | Detail |
| CX1g006982 | 1:31,587,574-31,590,372 | - | C1H1g09267 | C2H1g01874 | LOC_Os01g61560 | Os01g0832000 | CDS5, OsCDS5 | Detail |
| CX1g004599 | 1:31,592,088-31,593,891 | + | C1H1g18254 | C2H1g04373 | LOC_Os01g61570 | Os01g0832100 | - | Detail |
| CX1g001311 | 1:31,596,164-31,599,484 | - | C1H1g00383 | C2H1g19266 | LOC_Os01g61580 | Os01g0832200 | - | Detail |
| CX1g004790 | 1:31,603,549-31,609,170 | + | C1H1g00574 | C2H1g14897 | LOC_Os01g61590 | Os01g0832300 | OsCPK3 | Detail |
| CX1g000601 | 1:31,624,769-31,629,009 | + | C1H1g31694 | C2H1g11131 | LOC_Os01g61610 | Os01g0832600 | - | Detail |
| CX1g006439 | 1:31,645,680-31,650,498 | + | C1H1g07002 | C2H1g22191 | LOC_Os01g61620 | Os01g0832900 | - | Detail |
| CX1g006609 | 1:31,651,243-31,653,240 | + | C1H1g10107 | C2H1g03571 | LOC_Os01g61630 | Os01g0833000 | - | Detail |
| CX1g003404 | 1:31,653,858-31,656,164 | - | C1H1g13635 | C2H1g17085 | LOC_Os01g61640 | Os01g0833100 | - | Detail |
| CX1g003333 | 1:31,661,149-31,664,246 | + | C1H1g07003 | C2H1g00983 | LOC_Os01g61670 | Os01g0833200 | - | Detail |
| CX1g005332 | 1:31,665,427-31,666,093 | + | C1H1g07552 | C2H1g24837 | LOC_Os01g61680 | Os01g0833400 | - | Detail |
| CX1g001176 | 1:31,667,096-31,669,907 | - | C1H1g26345 | C2H1g22767 | LOC_Os01g61690 | Os01g0833500 | - | Detail |
| CX1g006671 | 1:31,670,816-31,670,983 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g000140 | 1:31,671,816-31,672,789 | - | C1H1g02922 | C2H1g05497 | LOC_Os01g61700 | Os01g0833600 | - | Detail |
| CX1g003313 | 1:31,673,851-31,679,411 | - | C1H1g09497 | C2H1g26726 | LOC_Os01g61710 | Os01g0833700 | - | Detail |
| CX1g001620 | 1:31,678,033-31,678,635 | + | - | - | - | Os01g0833750 | - | Detail |