| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g10280 | 12:11,498,917-11,500,868 | + | C1H12g15106 | CX12g016391 | LOC_Os12g23200 | Os12g0420400 | - | Detail |
| C2H12g01063 | 12:11,561,467-11,562,762 | + | C1H12g08853 | CX12g017123 | LOC_Os12g23280 | Os12g0421000 | - | Detail |
| C2H12g06749 | 12:11,583,035-11,584,229 | + | C1H12g09230 | CX12g015903 | LOC_Os12g23310 | Os12g0421300 | - | Detail |
| C2H12g04635 | 12:11,627,118-11,627,602 | - | C1H12g06645 | - | - | - | - | Detail |
| C2H12g13771 | 12:11,628,395-11,631,506 | - | C1H12g30597 | CX3g027805 | - | - | - | Detail |
| C2H12g11907 | 12:11,633,205-11,634,398 | + | C1H12g07677 | CX12g015513 | LOC_Os12g23670 | - | - | Detail |
| C2H12g10311 | 12:11,727,662-11,728,645 | + | C1H12g25023 | CX12g017134 | LOC_Os12g23700 | Os12g0424700 | OsCDKF;2 | Detail |
| C2H12g15775 | 12:11,774,354-11,781,890 | + | C1H12g03552 | CX12g018433 | LOC_Os12g23760 | Os12g0425600 | - | Detail |
| C2H12g03201 | 12:11,795,702-11,796,104 | + | C1H12g11675 | CX12g016330 | LOC_Os12g23820 | - | - | Detail |
| C2H12g08233 | 12:11,835,165-11,838,024 | + | C1H12g23241 | CX12g018205 | LOC_Os09g19790 | Os09g0362500 | - | Detail |
| C2H12g02754 | 12:11,840,410-11,842,795 | - | C1H12g26832 | CX12g017422 | LOC_Os12g23930 | Os12g0427000 | - | Detail |
| C2H12g18639 | 12:11,846,460-11,847,638 | + | C1H12g22336 | CX12g017255 | LOC_Os12g23940 | Os12g0427100 | - | Detail |
| C2H12g23524 | 12:11,853,859-11,854,962 | + | C1H12g28928 | CX12g016259 | LOC_Os12g23950 | Os12g0427450 | - | Detail |
| C2H12g05079 | 12:11,855,280-11,855,774 | - | C1H12g06272 | CX12g017870 | - | - | - | Detail |
| C2H12g28772 | 12:11,869,012-11,871,213 | - | C1H12g14938 | CX12g016199 | LOC_Os12g23980 | Os12g0427600 | OsSUB63 | Detail |
| C2H12g06293 | 12:11,894,763-11,896,832 | + | C1H12g17766 | CX12g017258 | - | Os12g0299650 | - | Detail |
| C2H12g03878 | 12:11,915,555-11,916,781 | + | C1H12g20606 | CX12g018431 | LOC_Os12g24020 | Os12g0428000 | - | Detail |
| C2H12g14327 | 12:11,926,534-11,932,506 | + | C1H12g06332 | CX12g018192 | - | Os12g0446700 | - | Detail |
| C2H12g20607 | 12:11,950,874-11,957,225 | + | C1H12g21550 | CX12g016209 | - | - | - | Detail |
| C2H12g16286 | 12:11,957,446-11,965,278 | + | C1H12g12526 | CX12g016209 | LOC_Os12g24080 | Os12g0428600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001275 | 1:31,558,445-31,559,020 | - | C1H1g19774 | C2H1g08171 | LOC_Os01g61470 | Os01g0830900 | - | Detail |
| CX1g002960 | 1:31,570,249-31,570,923 | + | C1H1g14773 | C2H1g07733 | LOC_Os01g61480 | Os01g0831000 | LAX1, lax, lax(lx), LAX1, lx, OsbHLH123 | Detail |
| CX1g003525 | 1:31,574,958-31,577,885 | + | C1H1g29926 | C2H1g10096 | LOC_Os01g61500 | Os01g0831200 | OsBAG4, EIP1 | Detail |
| CX1g003586 | 1:31,578,531-31,580,750 | - | C1H1g29563 | C2H1g19797 | LOC_Os01g61510 | Os01g0831300 | - | Detail |
| CX1g004163 | 1:31,583,546-31,585,240 | - | C1H1g16875 | C2H1g10064 | LOC_Os01g61550 | Os01g0831900 | - | Detail |
| CX1g006982 | 1:31,587,574-31,590,372 | - | C1H1g09267 | C2H1g01874 | LOC_Os01g61560 | Os01g0832000 | CDS5, OsCDS5 | Detail |
| CX1g004599 | 1:31,592,088-31,593,891 | + | C1H1g18254 | C2H1g04373 | LOC_Os01g61570 | Os01g0832100 | - | Detail |
| CX1g001311 | 1:31,596,164-31,599,484 | - | C1H1g00383 | C2H1g19266 | LOC_Os01g61580 | Os01g0832200 | - | Detail |
| CX1g004790 | 1:31,603,549-31,609,170 | + | C1H1g00574 | C2H1g14897 | LOC_Os01g61590 | Os01g0832300 | OsCPK3 | Detail |
| CX1g000601 | 1:31,624,769-31,629,009 | + | C1H1g31694 | C2H1g11131 | LOC_Os01g61610 | Os01g0832600 | - | Detail |
| CX1g006439 | 1:31,645,680-31,650,498 | + | C1H1g07002 | C2H1g22191 | LOC_Os01g61620 | Os01g0832900 | - | Detail |
| CX1g006609 | 1:31,651,243-31,653,240 | + | C1H1g10107 | C2H1g03571 | LOC_Os01g61630 | Os01g0833000 | - | Detail |
| CX1g003404 | 1:31,653,858-31,656,164 | - | C1H1g13635 | C2H1g17085 | LOC_Os01g61640 | Os01g0833100 | - | Detail |
| CX1g003333 | 1:31,661,149-31,664,246 | + | C1H1g07003 | C2H1g00983 | LOC_Os01g61670 | Os01g0833200 | - | Detail |
| CX1g005332 | 1:31,665,427-31,666,093 | + | C1H1g07552 | C2H1g24837 | LOC_Os01g61680 | Os01g0833400 | - | Detail |
| CX1g001176 | 1:31,667,096-31,669,907 | - | C1H1g26345 | C2H1g22767 | LOC_Os01g61690 | Os01g0833500 | - | Detail |
| CX1g006671 | 1:31,670,816-31,670,983 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g000140 | 1:31,671,816-31,672,789 | - | C1H1g02922 | C2H1g05497 | LOC_Os01g61700 | Os01g0833600 | - | Detail |
| CX1g003313 | 1:31,673,851-31,679,411 | - | C1H1g09497 | C2H1g26726 | LOC_Os01g61710 | Os01g0833700 | - | Detail |
| CX1g001620 | 1:31,678,033-31,678,635 | + | - | - | - | Os01g0833750 | - | Detail |