| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g03898 | 5:17,709,305-17,709,709 | - | C2H5g23100 | CX5g037991 | LOC_Os05g37030 | Os05g0442000 | - | Detail |
| C1H5g24883 | 5:17,731,753-17,732,698 | - | C2H5g23234 | CX5g037273 | LOC_Os05g37050 | Os05g0442400 | MID1, OsMYB-1 | Detail |
| C1H5g10359 | 5:17,736,152-17,736,969 | - | C2H5g00840 | CX5g037170 | LOC_Os05g37060 | Os05g0442400 | MID1, OsMYB-1 | Detail |
| C1H5g08191 | 5:17,742,795-17,744,024 | - | C2H5g00201 | CX5g040230 | LOC_Os05g37080 | Os05g0442700 | - | Detail |
| C1H5g19867 | 5:17,765,354-17,770,821 | - | C2H5g28484 | CX5g039130 | LOC_Os05g37120 | Os05g0443300 | - | Detail |
| C1H5g09712 | 5:17,772,921-17,776,486 | - | C2H5g27590 | CX5g039104 | LOC_Os05g37130 | Os05g0443400 | - | Detail |
| C1H5g30431 | 5:17,779,232-17,779,678 | - | C2H5g23800 | CX1g006506 | LOC_Os05g37140 | Os05g0443500 | - | Detail |
| C1H5g02201 | 5:17,781,355-17,784,937 | - | C2H5g20139 | CX5g036774 | LOC_Os05g37150 | Os05g0443700 | - | Detail |
| C1H5g03814 | 5:17,785,187-17,788,866 | - | C2H5g16230 | CX5g036747 | LOC_Os05g37160 | Os05g0443800 | - | Detail |
| C1H5g18939 | 5:17,793,828-17,797,941 | + | C2H5g21089 | CX5g040832 | LOC_Os05g37170 | Os05g0443900 | OsLG2L | Detail |
| C1H5g18403 | 5:17,805,579-17,807,369 | + | C2H5g30678 | CX5g041157 | LOC_Os05g37190 | Os05g0444200 | - | Detail |
| C1H5g26308 | 5:17,818,831-17,823,470 | + | C2H5g05442 | CX5g039100 | LOC_Os05g37200 | Os05g0444300 | - | Detail |
| C1H5g17523 | 5:17,828,710-17,830,698 | + | C2H5g05266 | CX5g039100 | LOC_Os05g37210 | Os05g0444500 | - | Detail |
| C1H5g21085 | 5:17,835,135-17,835,566 | - | C2H5g02726 | - | - | - | - | Detail |
| C1H5g15251 | 5:17,854,579-17,856,138 | + | C2H5g19880 | CX5g037707 | LOC_Os05g37250 | Os05g0445100 | - | Detail |
| C1H5g10165 | 5:17,867,673-17,869,811 | + | C2H5g22436 | CX5g036986 | LOC_Os05g37330 | Os05g0445500 | - | Detail |
| C1H5g16582 | 5:17,871,676-17,874,581 | + | C2H5g19823 | CX5g039380 | LOC_Os05g37340 | Os05g0445800 | - | Detail |
| C1H5g23261 | 5:17,875,742-17,886,751 | - | C2H5g27548 | CX5g037841 | LOC_Os05g37410 | Os05g0446600 | DNG704 | Detail |
| C1H5g23416 | 5:17,890,768-17,898,864 | - | C2H5g29688 | CX5g040916 | LOC_Os05g37434 | Os05g0446800 | - | Detail |
| C1H5g20294 | 5:17,902,433-17,904,833 | - | C2H5g22596 | CX5g040141 | LOC_Os05g37450 | Os05g0446900 | SBDCP2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001275 | 1:31,558,445-31,559,020 | - | C1H1g19774 | C2H1g08171 | LOC_Os01g61470 | Os01g0830900 | - | Detail |
| CX1g002960 | 1:31,570,249-31,570,923 | + | C1H1g14773 | C2H1g07733 | LOC_Os01g61480 | Os01g0831000 | LAX1, lax, lax(lx), LAX1, lx, OsbHLH123 | Detail |
| CX1g003525 | 1:31,574,958-31,577,885 | + | C1H1g29926 | C2H1g10096 | LOC_Os01g61500 | Os01g0831200 | OsBAG4, EIP1 | Detail |
| CX1g003586 | 1:31,578,531-31,580,750 | - | C1H1g29563 | C2H1g19797 | LOC_Os01g61510 | Os01g0831300 | - | Detail |
| CX1g004163 | 1:31,583,546-31,585,240 | - | C1H1g16875 | C2H1g10064 | LOC_Os01g61550 | Os01g0831900 | - | Detail |
| CX1g006982 | 1:31,587,574-31,590,372 | - | C1H1g09267 | C2H1g01874 | LOC_Os01g61560 | Os01g0832000 | CDS5, OsCDS5 | Detail |
| CX1g004599 | 1:31,592,088-31,593,891 | + | C1H1g18254 | C2H1g04373 | LOC_Os01g61570 | Os01g0832100 | - | Detail |
| CX1g001311 | 1:31,596,164-31,599,484 | - | C1H1g00383 | C2H1g19266 | LOC_Os01g61580 | Os01g0832200 | - | Detail |
| CX1g004790 | 1:31,603,549-31,609,170 | + | C1H1g00574 | C2H1g14897 | LOC_Os01g61590 | Os01g0832300 | OsCPK3 | Detail |
| CX1g000601 | 1:31,624,769-31,629,009 | + | C1H1g31694 | C2H1g11131 | LOC_Os01g61610 | Os01g0832600 | - | Detail |
| CX1g006439 | 1:31,645,680-31,650,498 | + | C1H1g07002 | C2H1g22191 | LOC_Os01g61620 | Os01g0832900 | - | Detail |
| CX1g006609 | 1:31,651,243-31,653,240 | + | C1H1g10107 | C2H1g03571 | LOC_Os01g61630 | Os01g0833000 | - | Detail |
| CX1g003404 | 1:31,653,858-31,656,164 | - | C1H1g13635 | C2H1g17085 | LOC_Os01g61640 | Os01g0833100 | - | Detail |
| CX1g003333 | 1:31,661,149-31,664,246 | + | C1H1g07003 | C2H1g00983 | LOC_Os01g61670 | Os01g0833200 | - | Detail |
| CX1g005332 | 1:31,665,427-31,666,093 | + | C1H1g07552 | C2H1g24837 | LOC_Os01g61680 | Os01g0833400 | - | Detail |
| CX1g001176 | 1:31,667,096-31,669,907 | - | C1H1g26345 | C2H1g22767 | LOC_Os01g61690 | Os01g0833500 | - | Detail |
| CX1g006671 | 1:31,670,816-31,670,983 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g000140 | 1:31,671,816-31,672,789 | - | C1H1g02922 | C2H1g05497 | LOC_Os01g61700 | Os01g0833600 | - | Detail |
| CX1g003313 | 1:31,673,851-31,679,411 | - | C1H1g09497 | C2H1g26726 | LOC_Os01g61710 | Os01g0833700 | - | Detail |
| CX1g001620 | 1:31,678,033-31,678,635 | + | - | - | - | Os01g0833750 | - | Detail |