| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g19227 | 3:24,541,799-24,542,739 | + | C2H3g29200 | CX3g028453 | LOC_Os03g46250 | Os03g0665000 | - | Detail |
| C1H3g03624 | 3:24,544,753-24,548,049 | - | C2H3g13481 | CX3g028439 | LOC_Os03g46260 | Os03g0665200 | OsFLZ11 | Detail |
| C1H3g02596 | 3:24,581,068-24,583,172 | + | C2H3g02010 | CX3g030454 | LOC_Os03g46310 | Os03g0665800 | - | Detail |
| C1H3g06192 | 3:24,588,766-24,595,789 | + | C2H3g24958 | CX3g030422 | LOC_Os03g46330 | Os03g0666100 | - | Detail |
| C1H3g26270 | 3:24,595,871-24,599,723 | - | C2H3g06923 | CX3g025831 | LOC_Os03g46340 | Os03g0666200 | OsSWAP70A | Detail |
| C1H3g10336 | 3:24,604,882-24,606,004 | + | C2H3g08439 | CX3g029931 | LOC_Os03g46350 | Os03g0666300 | - | Detail |
| C1H3g03788 | 3:24,615,395-24,621,631 | + | C2H3g02623 | CX3g027340 | LOC_Os03g46390 | Os03g0666500 | - | Detail |
| C1H3g03865 | 3:24,622,250-24,624,847 | - | C2H3g22843 | CX3g026425 | LOC_Os03g46410 | Os03g0666700 | - | Detail |
| C1H3g13561 | 3:24,635,082-24,638,710 | - | C2H3g09706 | CX3g026086 | LOC_Os03g46440 | Os03g0667100 | - | Detail |
| C1H3g09851 | 3:24,649,516-24,650,720 | - | C2H3g16749 | CX3g030979 | LOC_Os03g46454 | Os03g0667300 | OsIRT2 | Detail |
| C1H3g21913 | 3:24,658,354-24,663,164 | - | C2H3g11751 | CX3g025528 | LOC_Os03g46470 | Os03g0667500 | OsIRT1 | Detail |
| C1H3g14101 | 3:24,664,905-24,670,128 | - | C2H3g12375 | CX3g026005 | LOC_Os03g46480 | Os03g0667700 | - | Detail |
| C1H3g27711 | 3:24,685,670-24,687,138 | + | C2H3g21545 | CX3g025010 | LOC_Os03g46510 | Os03g0668000 | - | Detail |
| C1H3g30467 | 3:24,698,335-24,700,897 | + | C2H3g00299 | CX3g030801 | LOC_Os03g46530 | Os03g0668000 | - | Detail |
| C1H3g14274 | 3:24,708,451-24,712,953 | + | C2H3g13344 | CX3g030508 | LOC_Os03g46550 | Os03g0668300 | - | Detail |
| C1H3g19376 | 3:24,738,081-24,739,277 | + | C2H3g18832 | CX3g026468 | LOC_Os03g46570 | Os03g0668500 | - | Detail |
| C1H3g28696 | 3:24,747,849-24,749,741 | + | C2H3g11477 | CX3g026071 | LOC_Os03g46600 | Os03g0668900 | - | Detail |
| C1H3g23346 | 3:24,750,627-24,757,311 | - | C2H3g10479 | CX3g026665 | LOC_Os03g46610 | Os03g0669000 | - | Detail |
| C1H3g28193 | 3:24,764,468-24,765,166 | - | C2H3g24036 | CX3g029802 | LOC_Os03g46640 | Os03g0669100 | - | Detail |
| C1H3g02699 | 3:24,766,768-24,774,683 | - | C2H3g13024 | CX3g029587 | LOC_Os03g46650 | Os03g0669200 | OsWD40-80, RGbeta1, RGB1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001275 | 1:31,558,445-31,559,020 | - | C1H1g19774 | C2H1g08171 | LOC_Os01g61470 | Os01g0830900 | - | Detail |
| CX1g002960 | 1:31,570,249-31,570,923 | + | C1H1g14773 | C2H1g07733 | LOC_Os01g61480 | Os01g0831000 | LAX1, lax, lax(lx), LAX1, lx, OsbHLH123 | Detail |
| CX1g003525 | 1:31,574,958-31,577,885 | + | C1H1g29926 | C2H1g10096 | LOC_Os01g61500 | Os01g0831200 | OsBAG4, EIP1 | Detail |
| CX1g003586 | 1:31,578,531-31,580,750 | - | C1H1g29563 | C2H1g19797 | LOC_Os01g61510 | Os01g0831300 | - | Detail |
| CX1g004163 | 1:31,583,546-31,585,240 | - | C1H1g16875 | C2H1g10064 | LOC_Os01g61550 | Os01g0831900 | - | Detail |
| CX1g006982 | 1:31,587,574-31,590,372 | - | C1H1g09267 | C2H1g01874 | LOC_Os01g61560 | Os01g0832000 | CDS5, OsCDS5 | Detail |
| CX1g004599 | 1:31,592,088-31,593,891 | + | C1H1g18254 | C2H1g04373 | LOC_Os01g61570 | Os01g0832100 | - | Detail |
| CX1g001311 | 1:31,596,164-31,599,484 | - | C1H1g00383 | C2H1g19266 | LOC_Os01g61580 | Os01g0832200 | - | Detail |
| CX1g004790 | 1:31,603,549-31,609,170 | + | C1H1g00574 | C2H1g14897 | LOC_Os01g61590 | Os01g0832300 | OsCPK3 | Detail |
| CX1g000601 | 1:31,624,769-31,629,009 | + | C1H1g31694 | C2H1g11131 | LOC_Os01g61610 | Os01g0832600 | - | Detail |
| CX1g006439 | 1:31,645,680-31,650,498 | + | C1H1g07002 | C2H1g22191 | LOC_Os01g61620 | Os01g0832900 | - | Detail |
| CX1g006609 | 1:31,651,243-31,653,240 | + | C1H1g10107 | C2H1g03571 | LOC_Os01g61630 | Os01g0833000 | - | Detail |
| CX1g003404 | 1:31,653,858-31,656,164 | - | C1H1g13635 | C2H1g17085 | LOC_Os01g61640 | Os01g0833100 | - | Detail |
| CX1g003333 | 1:31,661,149-31,664,246 | + | C1H1g07003 | C2H1g00983 | LOC_Os01g61670 | Os01g0833200 | - | Detail |
| CX1g005332 | 1:31,665,427-31,666,093 | + | C1H1g07552 | C2H1g24837 | LOC_Os01g61680 | Os01g0833400 | - | Detail |
| CX1g001176 | 1:31,667,096-31,669,907 | - | C1H1g26345 | C2H1g22767 | LOC_Os01g61690 | Os01g0833500 | - | Detail |
| CX1g006671 | 1:31,670,816-31,670,983 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g000140 | 1:31,671,816-31,672,789 | - | C1H1g02922 | C2H1g05497 | LOC_Os01g61700 | Os01g0833600 | - | Detail |
| CX1g003313 | 1:31,673,851-31,679,411 | - | C1H1g09497 | C2H1g26726 | LOC_Os01g61710 | Os01g0833700 | - | Detail |
| CX1g001620 | 1:31,678,033-31,678,635 | + | - | - | - | Os01g0833750 | - | Detail |